RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GALNT1Q10472 559 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 PKP1Q13835 747 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 FAM83HQ6ZRV2 1179 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 RINLQ6ZS11 566 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 MOB2Q70IA6 237 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 APOBEC3FQ8IUX4 373 aaKnown RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 CLEC18CQ8NCF0 446 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 LMO3Q8TAP4 145 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 TBC1D16Q8TBP0 767 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 ZNF333Q96JL9 665 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 APOLD1Q96LR9 279 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 ABHD16BQ9H3Z7 469 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 KLHL31Q9H511 634 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 SLC22A11Q9NSA0 550 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 MIS18AQ9NYP9 233 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 NDUFAF4Q9P032 175 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 LAMB2P55268 1798 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 RTL9Q8NET4 1388 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 TMEM247A6NEH6 219 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 IFITM10A6NMD0 228 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 VWA5AO00534 786 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 HNRNPRO43390 633 aaKnown RBP5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 PLIN1O60240 522 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 CYP21A2P08686 494 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 HSPA5P11021 654 aaKnown RBP5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 LYL1P12980 280 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 CAPN2P17655 700 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRKCHP24723 683 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 RRP1P56182 461 aaKnown RBP5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 DCTN1Q14203 1278 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 Q6ZTC4 211 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 RRAGAQ7L523 313 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 SCN4BQ8IWT1 228 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 CD99L2Q8TCZ2 262 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 C2CD4CQ8TF44 421 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 C6orf106Q9H6K1 298 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 LRFN1Q9P244 771 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 KLQ9UEF7 1012 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 PSME4Q14997 1843 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 LRRC37AA6NMS7 1700 aa5.17□□□□□ -1.58
HMGB3P5-201ENST00000428894 KDM3BQ7LBC6 1761 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 SCN9AQ15858 1988 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 UFL1O94874 794 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 EIF2S2P20042 333 aaKnown RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRMT2P55345 433 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 ICA1Q05084 483 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 SHBQ15464 509 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 GXYLT1Q4G148 440 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 LRRC24Q50LG9 513 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 TDRD12Q587J7 1177 aaKnown RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 DGAT2L7PQ6IED9 249 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 SYNE3Q6ZMZ3 975 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 TOGARAM2Q6ZUX3 1019 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 COPS6Q7L5N1 327 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 FAR1Q8WVX9 515 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 TRAPPC9Q96Q05 1148 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 FRG2BQ96QU4 278 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 CADM1Q9BY67 442 aaKnown RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 CLPBQ9H078 707 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 PNNQ9H307 717 aaKnown RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 UNC80Q8N2C7 3258 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 TCF20Q9UGU0 1960 aaKnown RBP5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 DUOX1Q9NRD9 1551 aa5.16□□□□□ -1.58
HMGB3P5-201ENST00000428894 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 ACKR2O00590 384 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 HSPB6O14558 160 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 SYN3O14994 580 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCNT1O60563 726 aaKnown RBP5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 MYZAPP0CAP1 466 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 HOXD10P28358 340 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 PDLIM4P50479 330 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 AIMP1Q12904 312 aaKnown RBP5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 PRKG1Q13976 671 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 SYTL3Q4VX76 610 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 SYCP2LQ5T4T6 812 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 TMEM268Q5VZI3 342 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 PTGR2Q8N8N7 351 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 RMDN3Q96TC7 470 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 CRB3Q9BUF7 120 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 IFT27Q9BW83 186 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 ACAD9Q9H845 621 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 RMI1Q9H9A7 625 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 BABAM1Q9NWV8 329 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 DACT1Q9NYF0 836 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 KCND3Q9UK17 655 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 PCDHGB1Q9Y5G3 927 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 LAMA3Q16787 3333 aa5.15□□□□□ -1.59
HMGB3P5-201ENST00000428894 COL1A1P02452 1464 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 LAMB1P07942 1786 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ABHD14A-ACY1A0A1B0GW23 586 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 C17orf102A2RUQ5 167 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ASAP2O43150 1006 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms