RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 AIM21P40563 679 aa3.3□□□□□ -1.88
snR48snR48 RGD2P43556 714 aa3.3□□□□□ -1.88
snR48snR48 HCM1P25364 564 aa3.29□□□□□ -1.88
snR48snR48 ATF1P40353 525 aa3.29□□□□□ -1.88
snR48snR48 FOL2P51601 243 aaKnown RBP3.29□□□□□ -1.88
snR48snR48 NTO1Q12311 748 aa3.29□□□□□ -1.88
snR48snR48 GAL2P13181 574 aa3.28□□□□□ -1.88
snR48snR48 KTR7P40504 517 aa3.28□□□□□ -1.88
snR48snR48 SPT20P50875 604 aa3.28□□□□□ -1.88
snR48snR48 MEC3Q02574 474 aa3.28□□□□□ -1.88
snR48snR48 NTA1P40354 457 aa3.27□□□□□ -1.89
snR48snR48 HXT8P40886 569 aa3.27□□□□□ -1.89
snR48snR48 GCN5Q03330 439 aa3.27□□□□□ -1.89
snR48snR48 ISC10P32645 267 aa3.26□□□□□ -1.89
snR48snR48 STE11P23561 717 aa3.25□□□□□ -1.89
snR48snR48 PYC2P32327 1180 aaKnown RBP3.25□□□□□ -1.89
snR48snR48 DOM34P33309 386 aa3.25□□□□□ -1.89
snR48snR48 NNK1P36003 928 aa3.25□□□□□ -1.89
snR48snR48 MEF2P39677 819 aa3.25□□□□□ -1.89
snR48snR48 SAM35P14693 329 aa3.24□□□□□ -1.89
snR48snR48 PPM2Q08282 695 aa3.24□□□□□ -1.89
snR48snR48 HTS1P07263 546 aaKnown RBP3.23□□□□□ -1.89
snR48snR48 LAM1P38851 1228 aa3.23□□□□□ -1.89
snR48snR48 ENV11P53246 860 aa3.23□□□□□ -1.89
snR48snR48 PUS7Q08647 676 aaKnown RBP3.23□□□□□ -1.89
snR48snR48 ALG6Q12001 544 aaKnown RBP3.23□□□□□ -1.89
snR48snR48 RTG2P32608 588 aaKnown RBP3.22□□□□□ -1.89
snR48snR48 REI1P38344 393 aaPredicted RBP3.22□□□□□ -1.89
snR48snR48 MNN10P50108 393 aaKnown RBP3.22□□□□□ -1.89
snR48snR48 SGD1Q06132 899 aa3.22□□□□□ -1.89
snR48snR48 KTR2P33550 425 aa3.21□□□□□ -1.9
snR48snR48 YJL007CP47080 104 aa3.21□□□□□ -1.9
snR48snR48 YGR045CP53229 120 aa3.21□□□□□ -1.9
snR48snR48 TIF6Q12522 245 aaKnown RBP3.21□□□□□ -1.9
snR48snR48 TIF1P10081 395 aaKnown RBP3.2□□□□□ -1.9
snR48snR48 MDL2P33311 773 aa3.2□□□□□ -1.9
snR48snR48 OAR1P35731 278 aa3.2□□□□□ -1.9
snR48snR48 IOC3P43596 787 aa3.2□□□□□ -1.9
snR48snR48 ALD4P46367 519 aaKnown RBP3.19□□□□□ -1.9
snR48snR48 ELA1P53861 379 aaPredicted RBP3.19□□□□□ -1.9
snR48snR48 DUS4Q06063 367 aa3.19□□□□□ -1.9
snR48snR48 SIS2P36024 562 aa3.18□□□□□ -1.9
snR48snR48 IRS4P36115 615 aaKnown RBP3.18□□□□□ -1.9
snR48snR48 YHL012WP38709 493 aa3.18□□□□□ -1.9
snR48snR48 PSY2P40164 858 aa3.18□□□□□ -1.9
snR48snR48 UTP22P53254 1237 aaPredicted RBP3.18□□□□□ -1.9
snR48snR48 KIN4Q01919 800 aa3.18□□□□□ -1.9
snR48snR48 TPP1Q03796 238 aa3.18□□□□□ -1.9
snR48snR48 PRP5P21372 849 aaPredicted RBP3.17□□□□□ -1.9
snR48snR48 PUF4P25339 888 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
snR48snR48 LST4P34239 828 aa3.17□□□□□ -1.9
snR48snR48 MOH1P38191 138 aa3.17□□□□□ -1.9
snR48snR48 MCM6P53091 1017 aaKnown RBP3.17□□□□□ -1.9
snR48snR48 LGE1Q02796 332 aaKnown RBP3.17□□□□□ -1.9
snR48snR48 YOR352WQ08816 343 aa3.17□□□□□ -1.9
snR48snR48 PMA1P05030 918 aaKnown RBP3.16□□□□□ -1.9
snR48snR48 DEF1P35732 738 aaKnown RBP3.16□□□□□ -1.9
snR48snR48 CUE2P36075 443 aaKnown RBP3.16□□□□□ -1.9
snR48snR48 RIM11P38615 370 aa3.16□□□□□ -1.9
snR48snR48 RAD55P38953 406 aa3.16□□□□□ -1.9
snR48snR48 PHO23P50947 330 aa3.16□□□□□ -1.9
snR48snR48 ARL1P38116 183 aaKnown RBP3.15□□□□□ -1.91
snR48snR48 ATG32P40458 529 aa3.15□□□□□ -1.91
snR48snR48 APC11Q12157 165 aa3.15□□□□□ -1.91
snR48snR48 SRS2P12954 1174 aa3.14□□□□□ -1.91
snR48snR48 NPR1P22211 790 aa3.14□□□□□ -1.91
snR48snR48 SRO9P25567 434 aaKnown RBP3.14□□□□□ -1.91
snR48snR48 CDC20P26309 610 aa3.14□□□□□ -1.91
snR48snR48 AIM26P32858 118 aa3.14□□□□□ -1.91
snR48snR48 CMR1Q12510 522 aaKnown RBP3.14□□□□□ -1.91
snR48snR48 MSS4P38994 779 aa3.13□□□□□ -1.91
snR48snR48 BIM1P40013 344 aa3.13□□□□□ -1.91
snR48snR48 HNT2P49775 206 aa3.13□□□□□ -1.91
snR48snR48 CTR9P89105 1077 aa3.13□□□□□ -1.91
snR48snR48 TMA10Q06177 86 aa3.13□□□□□ -1.91
snR48snR48 AVO1Q08236 1176 aa3.12□□□□□ -1.91
snR48snR48 DCG1P32460 244 aa3.11□□□□□ -1.91
snR48snR48 QRI1P43123 477 aaKnown RBP3.11□□□□□ -1.91
snR48snR48 UBA2P52488 636 aa3.11□□□□□ -1.91
snR48snR48 COBP00163 385 aa3.09□□□□□ -1.91
snR48snR48 SMC1P32908 1225 aa3.09□□□□□ -1.91
snR48snR48 RPL34BP40525 121 aaKnown RBP3.09□□□□□ -1.91
snR48snR48 SUT1P53032 299 aaKnown RBP3.09□□□□□ -1.91
snR48snR48 PLB2Q03674 706 aa3.09□□□□□ -1.91
snR48snR48 ACK1Q07622 623 aaPredicted RBP3.09□□□□□ -1.91
snR48snR48 CYC1P00044 109 aaPredicted RBP3.08□□□□□ -1.92
snR48snR48 SPS1P08458 490 aa3.08□□□□□ -1.92
snR48snR48 CDC6P09119 513 aa3.08□□□□□ -1.92
snR48snR48 ROT1Q03691 256 aa3.08□□□□□ -1.92
snR48snR48 RSC58Q07979 502 aa3.08□□□□□ -1.92
snR48snR48 RXT3Q07458 294 aa3.07□□□□□ -1.92
snR48snR48 NDJ1Q12366 352 aa3.07□□□□□ -1.92
snR48snR48 TGL4P36165 910 aa3.06□□□□□ -1.92
snR48snR48 PUF6Q04373 656 aaKnown RBP3.06□□□□□ -1.92
snR48snR48 YLR257WQ06146 321 aaKnown RBP3.06□□□□□ -1.92
snR48snR48 TY1A-LR4P0C2I8 440 aaKnown RBP3.05□□□□□ -1.92
snR48snR48 TY1A-DR6P0CX70 440 aa3.05□□□□□ -1.92
snR48snR48 TY1A-ER1P0CX71 440 aa3.05□□□□□ -1.92
snR48snR48 TY1A-LR2P0CX72 440 aa3.05□□□□□ -1.92
snR48snR48 TY1A-PLP0CX73 440 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms