RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C PEA2P40091 420 aa5.59□□□□□ -1.51
SPN1YPR133C UBP16Q02863 499 aa5.59□□□□□ -1.51
SPN1YPR133C AOS1Q06624 347 aa5.59□□□□□ -1.51
SPN1YPR133C VPS13Q07878 3144 aa5.59□□□□□ -1.52
SPN1YPR133C RPP2BP02400 110 aaKnown RBP5.58□□□□□ -1.52
SPN1YPR133C RDS2P19541 446 aaKnown RBP5.58□□□□□ -1.52
SPN1YPR133C LSC2P53312 427 aa5.58□□□□□ -1.52
SPN1YPR133C HPF1Q05164 967 aa5.58□□□□□ -1.52
SPN1YPR133C YPR204WQ08995 1032 aa5.58□□□□□ -1.52
SPN1YPR133C HAL5P38970 855 aaKnown RBP5.57□□□□□ -1.52
SPN1YPR133C SSP2Q08646 371 aa5.57□□□□□ -1.52
SPN1YPR133C UBP2Q01476 1272 aa5.56□□□□□ -1.52
SPN1YPR133C SPT2P06843 333 aaPredicted RBP5.55□□□□□ -1.52
SPN1YPR133C FRD1P32614 470 aaKnown RBP5.55□□□□□ -1.52
SPN1YPR133C NCS6P53088 359 aa5.55□□□□□ -1.52
SPN1YPR133C YGR117CP53270 476 aa5.55□□□□□ -1.52
SPN1YPR133C TRM44Q02648 567 aaKnown RBP5.55□□□□□ -1.52
SPN1YPR133C CWC15Q03772 175 aaKnown RBP5.55□□□□□ -1.52
SPN1YPR133C SYF1Q04048 859 aaPredicted RBP5.55□□□□□ -1.52
SPN1YPR133C HVG1P0CE11 249 aa5.54□□□□□ -1.52
SPN1YPR133C UTR2P32623 467 aa5.54□□□□□ -1.52
SPN1YPR133C DLD1P32891 587 aa5.54□□□□□ -1.52
SPN1YPR133C NTH2P35172 780 aa5.54□□□□□ -1.52
SPN1YPR133C BSD2P38356 321 aa5.54□□□□□ -1.52
SPN1YPR133C DLD3P39976 496 aaKnown RBP5.54□□□□□ -1.52
SPN1YPR133C YJR098CP47139 656 aa5.54□□□□□ -1.52
SPN1YPR133C VPS4P52917 437 aa5.54□□□□□ -1.52
SPN1YPR133C PAP2P53632 584 aaKnown RBP5.54□□□□□ -1.52
SPN1YPR133C SSK22P25390 1331 aaPredicted RBP5.53□□□□□ -1.52
SPN1YPR133C DAT1P13483 248 aaKnown RBP5.53□□□□□ -1.52
SPN1YPR133C PEP12P32854 288 aa5.53□□□□□ -1.52
SPN1YPR133C SIS2P36024 562 aa5.53□□□□□ -1.52
SPN1YPR133C PAM1P37304 830 aaKnown RBP5.53□□□□□ -1.52
SPN1YPR133C HDA3Q06623 655 aa5.53□□□□□ -1.52
SPN1YPR133C WTM2Q12206 467 aa5.53□□□□□ -1.52
SPN1YPR133C HAT1Q12341 374 aa5.53□□□□□ -1.52
SPN1YPR133C HPR1P17629 752 aaKnown RBP5.52□□□□□ -1.53
SPN1YPR133C STV1P37296 890 aa5.52□□□□□ -1.53
SPN1YPR133C TBS1P38114 1094 aa5.52□□□□□ -1.53
SPN1YPR133C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SPN1YPR133C CSR2Q12734 1121 aa5.52□□□□□ -1.53
SPN1YPR133C APL2P36000 726 aaPredicted RBP5.51□□□□□ -1.53
SPN1YPR133C LYS2P07702 1392 aa5.51□□□□□ -1.53
SPN1YPR133C AFG2P32794 780 aa5.5□□□□□ -1.53
SPN1YPR133C MOT2P34909 587 aaKnown RBP5.5□□□□□ -1.53
SPN1YPR133C PNT1P38969 423 aa5.5□□□□□ -1.53
SPN1YPR133C PDS5Q04264 1277 aa5.5□□□□□ -1.53
SPN1YPR133C CRF1Q04930 467 aa5.5□□□□□ -1.53
SPN1YPR133C DPH6Q12429 685 aa5.5□□□□□ -1.53
SPN1YPR133C DUR1,2P32528 1835 aaKnown RBP5.49□□□□□ -1.53
SPN1YPR133C TTI1P36097 1038 aa5.49□□□□□ -1.53
SPN1YPR133C MAL31P38156 614 aa5.49□□□□□ -1.53
SPN1YPR133C AIM9P40053 627 aaKnown RBP5.49□□□□□ -1.53
SPN1YPR133C SLX8P40072 274 aa5.49□□□□□ -1.53
SPN1YPR133C YFL034WP43564 1073 aa5.49□□□□□ -1.53
SPN1YPR133C ROG3P43602 733 aa5.49□□□□□ -1.53
SPN1YPR133C RRT6P53117 311 aaPredicted RBP5.49□□□□□ -1.53
SPN1YPR133C GAS5Q08193 484 aa5.49□□□□□ -1.53
SPN1YPR133C APE3P37302 537 aaKnown RBP5.48□□□□□ -1.53
SPN1YPR133C KTR7P40504 517 aa5.48□□□□□ -1.53
SPN1YPR133C YML020WQ03722 664 aa5.48□□□□□ -1.53
SPN1YPR133C TY1A-MR1Q04215 440 aa5.48□□□□□ -1.53
SPN1YPR133C RRG1Q12167 365 aaPredicted RBP5.48□□□□□ -1.53
SPN1YPR133C FLO11P08640 1367 aa5.47□□□□□ -1.53
SPN1YPR133C OSH7P38755 437 aa5.47□□□□□ -1.53
SPN1YPR133C VTC4P47075 721 aa5.47□□□□□ -1.53
SPN1YPR133C VPS64Q03944 604 aa5.47□□□□□ -1.53
SPN1YPR133C NSE3Q05541 303 aa5.47□□□□□ -1.53
SPN1YPR133C TSC13Q99190 310 aa5.47□□□□□ -1.53
SPN1YPR133C KRE2P27809 442 aa5.46□□□□□ -1.54
SPN1YPR133C ICP55P40051 511 aa5.46□□□□□ -1.54
SPN1YPR133C NOP8Q08287 484 aaPredicted RBP5.46□□□□□ -1.54
SPN1YPR133C AIM44Q99299 758 aa5.46□□□□□ -1.54
SPN1YPR133C CBP1P07252 654 aa5.45□□□□□ -1.54
SPN1YPR133C SWI5P08153 709 aa5.45□□□□□ -1.54
SPN1YPR133C PHO87P25360 923 aa5.45□□□□□ -1.54
SPN1YPR133C DAL1P32375 460 aa5.45□□□□□ -1.54
SPN1YPR133C UTP7P40055 554 aaKnown RBP5.45□□□□□ -1.54
SPN1YPR133C SUM1P46676 1062 aa5.45□□□□□ -1.54
SPN1YPR133C LYS5P50113 272 aa5.45□□□□□ -1.54
SPN1YPR133C YNL050CP53952 270 aa5.45□□□□□ -1.54
SPN1YPR133C ZDS2P54786 942 aa5.45□□□□□ -1.54
SPN1YPR133C RBA50Q04418 439 aa5.45□□□□□ -1.54
SPN1YPR133C PUS1Q12211 544 aaKnown RBP5.45□□□□□ -1.54
SPN1YPR133C CCP1P00431 361 aa5.44□□□□□ -1.54
SPN1YPR133C RPS6AP0CX37 236 aaKnown RBP5.44□□□□□ -1.54
SPN1YPR133C RPS6BP0CX38 236 aaPredicted RBP5.44□□□□□ -1.54
SPN1YPR133C HAP4P14064 554 aa5.44□□□□□ -1.54
SPN1YPR133C TGL4P36165 910 aa5.44□□□□□ -1.54
SPN1YPR133C SSN3P39073 555 aa5.44□□□□□ -1.54
SPN1YPR133C ACS2P52910 683 aaKnown RBP5.44□□□□□ -1.54
SPN1YPR133C RRP46P53256 223 aaPredicted RBP5.44□□□□□ -1.54
SPN1YPR133C SEN54Q02825 467 aaPredicted RBP5.44□□□□□ -1.54
SPN1YPR133C UBX2Q04228 584 aa5.44□□□□□ -1.54
SPN1YPR133C GAL2P13181 574 aa5.43□□□□□ -1.54
SPN1YPR133C SPL2P38839 148 aa5.43□□□□□ -1.54
SPN1YPR133C GSM1P42950 618 aa5.43□□□□□ -1.54
SPN1YPR133C JJJ3P47138 172 aa5.43□□□□□ -1.54
SPN1YPR133C YPR117WQ06116 2489 aa5.43□□□□□ -1.54
SPN1YPR133C CDC19P00549 500 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms