RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W PEX7P39108 375 aa5.05□□□□□ -1.6
MRPL40YPL173W MSH4P40965 878 aaPredicted RBP5.05□□□□□ -1.6
MRPL40YPL173W MSH6Q03834 1242 aa5.05□□□□□ -1.6
MRPL40YPL173W AIM3P38266 947 aaKnown RBP5.04□□□□□ -1.6
MRPL40YPL173W YVC1Q12324 675 aa5.04□□□□□ -1.6
MRPL40YPL173W COBP00163 385 aa5.03□□□□□ -1.6
MRPL40YPL173W HTS1P07263 546 aaKnown RBP5.03□□□□□ -1.6
MRPL40YPL173W YML083CQ04526 418 aa5.03□□□□□ -1.6
MRPL40YPL173W PRO1P32264 428 aa5.02□□□□□ -1.61
MRPL40YPL173W RIM11P38615 370 aa5.02□□□□□ -1.61
MRPL40YPL173W MEC3Q02574 474 aa5.02□□□□□ -1.61
MRPL40YPL173W YDL177CQ12257 170 aa5.02□□□□□ -1.61
MRPL40YPL173W CMR1Q12510 522 aaKnown RBP5.02□□□□□ -1.61
MRPL40YPL173W NPR1P22211 790 aa5.01□□□□□ -1.61
MRPL40YPL173W RIM8P53179 542 aa5.01□□□□□ -1.61
MRPL40YPL173W MRPL22P53881 309 aa5.01□□□□□ -1.61
MRPL40YPL173W PRP5P21372 849 aaPredicted RBP5□□□□□ -1.61
MRPL40YPL173W ALG6Q12001 544 aaKnown RBP5□□□□□ -1.61
MRPL40YPL173W NFS1P25374 497 aa4.98□□□□□ -1.61
MRPL40YPL173W DUR3P33413 735 aa4.98□□□□□ -1.61
MRPL40YPL173W REI1P38344 393 aaPredicted RBP4.98□□□□□ -1.61
MRPL40YPL173W PTC7P38797 343 aa4.98□□□□□ -1.61
MRPL40YPL173W UTP22P53254 1237 aaPredicted RBP4.98□□□□□ -1.61
MRPL40YPL173W SMY2P32909 740 aaKnown RBP4.97□□□□□ -1.61
MRPL40YPL173W GSF2Q04697 403 aaKnown RBP4.97□□□□□ -1.61
MRPL40YPL173W NOB1Q08444 459 aaKnown RBP4.97□□□□□ -1.61
MRPL40YPL173W SOD2P00447 233 aa4.96□□□□□ -1.62
MRPL40YPL173W BOL3P39724 118 aa4.95□□□□□ -1.62
MRPL40YPL173W GTS1P40956 396 aa4.95□□□□□ -1.62
MRPL40YPL173W YGR045CP53229 120 aa4.95□□□□□ -1.62
MRPL40YPL173W SUB2Q07478 446 aaKnown RBP4.95□□□□□ -1.62
MRPL40YPL173W FUR4P05316 633 aaKnown RBP4.94□□□□□ -1.62
MRPL40YPL173W TOD6P34219 525 aa4.94□□□□□ -1.62
MRPL40YPL173W ETP1P38748 585 aaKnown RBP4.94□□□□□ -1.62
MRPL40YPL173W ELA1P53861 379 aaPredicted RBP4.94□□□□□ -1.62
MRPL40YPL173W NNK1P36003 928 aa4.93□□□□□ -1.62
MRPL40YPL173W RSC4Q02206 625 aa4.93□□□□□ -1.62
MRPL40YPL173W YPL277CQ08989 487 aa4.93□□□□□ -1.62
MRPL40YPL173W ABZ1P37254 787 aaPredicted RBP4.92□□□□□ -1.62
MRPL40YPL173W TAD3Q9URQ3 322 aa4.92□□□□□ -1.62
MRPL40YPL173W SSA1P10591 642 aaKnown RBP4.91□□□□□ -1.62
MRPL40YPL173W ECM2P38241 364 aaKnown RBP4.91□□□□□ -1.62
MRPL40YPL173W SAP155P43612 1002 aa4.91□□□□□ -1.62
MRPL40YPL173W PUS7Q08647 676 aaKnown RBP4.91□□□□□ -1.62
MRPL40YPL173W RPS13P05756 151 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W TY1A-LR4P0C2I8 440 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W TY1A-DR6P0CX70 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-ER1P0CX71 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-LR2P0CX72 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-PLP0CX73 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-JR1P0CX74 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-LR3P0CX75 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-ML2P0CX76 440 aa4.9□□□□□ -1.63
MRPL40YPL173W SSA4P22202 642 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W ARL1P38116 183 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W CLU1Q03690 1277 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W TY1A-GR1Q12085 440 aa4.9□□□□□ -1.63
MRPL40YPL173W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W TY1A-OLQ92392 440 aaKnown RBP4.9□□□□□ -1.63
MRPL40YPL173W GEF1P37020 779 aa4.89□□□□□ -1.63
MRPL40YPL173W AVO1Q08236 1176 aa4.89□□□□□ -1.63
MRPL40YPL173W TPP1Q03796 238 aa4.88□□□□□ -1.63
MRPL40YPL173W SAM35P14693 329 aa4.87□□□□□ -1.63
MRPL40YPL173W CTS1P29029 562 aa4.87□□□□□ -1.63
MRPL40YPL173W SHM2P37291 469 aaKnown RBP4.87□□□□□ -1.63
MRPL40YPL173W UFD2P54860 961 aa4.87□□□□□ -1.63
MRPL40YPL173W PRE10P21242 288 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
MRPL40YPL173W SNO2P53823 222 aa4.86□□□□□ -1.63
MRPL40YPL173W YAF9P53930 226 aa4.86□□□□□ -1.63
MRPL40YPL173W YLR358CO13565 187 aa4.85□□□□□ -1.63
MRPL40YPL173W TUB2P02557 457 aaKnown RBP4.85□□□□□ -1.63
MRPL40YPL173W YML020WQ03722 664 aa4.85□□□□□ -1.63
MRPL40YPL173W PMT7Q06644 662 aa4.85□□□□□ -1.63
MRPL40YPL173W NOP8Q08287 484 aaPredicted RBP4.85□□□□□ -1.63
MRPL40YPL173W FLP1P03870 423 aa4.84□□□□□ -1.63
MRPL40YPL173W NUT1P53114 1132 aa4.84□□□□□ -1.63
MRPL40YPL173W YHL012WP38709 493 aa4.83□□□□□ -1.64
MRPL40YPL173W FOL2P51601 243 aaKnown RBP4.83□□□□□ -1.64
MRPL40YPL173W PNS1Q12412 539 aa4.83□□□□□ -1.64
MRPL40YPL173W GLO3P38682 493 aaKnown RBP4.82□□□□□ -1.64
MRPL40YPL173W SLS1P42900 643 aa4.82□□□□□ -1.64
MRPL40YPL173W YDR132CQ03900 495 aa4.82□□□□□ -1.64
MRPL40YPL173W MDL2P33311 773 aa4.81□□□□□ -1.64
MRPL40YPL173W EXO5P38289 585 aa4.81□□□□□ -1.64
MRPL40YPL173W NMD3P38861 518 aaKnown RBP4.81□□□□□ -1.64
MRPL40YPL173W QDR1P40475 563 aa4.81□□□□□ -1.64
MRPL40YPL173W YNL011CP53980 444 aa4.81□□□□□ -1.64
MRPL40YPL173W BSC2Q05611 235 aa4.81□□□□□ -1.64
MRPL40YPL173W YPT53P36019 220 aa4.8□□□□□ -1.64
MRPL40YPL173W NEM1P38757 446 aa4.8□□□□□ -1.64
MRPL40YPL173W YLR257WQ06146 321 aaKnown RBP4.8□□□□□ -1.64
MRPL40YPL173W MNL2Q12205 849 aa4.8□□□□□ -1.64
MRPL40YPL173W RET1P22276 1149 aaKnown RBP4.79□□□□□ -1.64
MRPL40YPL173W MCM5P29496 775 aaKnown RBP4.79□□□□□ -1.64
MRPL40YPL173W YAR028WP39548 234 aa4.79□□□□□ -1.64
MRPL40YPL173W AIM26P32858 118 aa4.78□□□□□ -1.64
MRPL40YPL173W YKL077WP36081 392 aa4.78□□□□□ -1.64
MRPL40YPL173W TAT2P38967 592 aa4.78□□□□□ -1.64
MRPL40YPL173W SRO9P25567 434 aaKnown RBP4.77□□□□□ -1.65
MRPL40YPL173W MPT5P39016 859 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms