RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	RNR3	P21672	869 aa	Known RBP	13.9	□□□□□ -0.18
TIR4	YOR009W	RTG2	P32608	588 aa	Known RBP	13.9	□□□□□ -0.18
TIR4	YOR009W	KEL1	P38853	1164 aa	Known RBP	13.9	□□□□□ -0.18
TIR4	YOR009W	AAD16	Q02895	342 aa		13.9	□□□□□ -0.18
TIR4	YOR009W	SKG3	Q06315	1026 aa		13.9	□□□□□ -0.18
TIR4	YOR009W	AIM7	Q12156	149 aa		13.9	□□□□□ -0.18
TIR4	YOR009W	PMA1	P05030	918 aa	Known RBP	13.89	□□□□□ -0.19
TIR4	YOR009W	KIN1	P13185	1064 aa		13.89	□□□□□ -0.19
TIR4	YOR009W	ARL1	P38116	183 aa	Known RBP	13.89	□□□□□ -0.19
TIR4	YOR009W	MAL31	P38156	614 aa		13.89	□□□□□ -0.19
TIR4	YOR009W	YBL028C	P38202	106 aa		13.89	□□□□□ -0.19
TIR4	YOR009W	EMP47	P43555	445 aa		13.89	□□□□□ -0.19
TIR4	YOR009W	HSP82	P02829	709 aa	Known RBP	13.88	□□□□□ -0.19
TIR4	YOR009W	RAD53	P22216	821 aa		13.88	□□□□□ -0.19
TIR4	YOR009W	ALG2	P43636	503 aa		13.88	□□□□□ -0.19
TIR4	YOR009W	MYO1	P08964	1928 aa		13.88	□□□□□ -0.19
TIR4	YOR009W	TUB2	P02557	457 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	CDC6	P09119	513 aa		13.87	□□□□□ -0.19
TIR4	YOR009W	FRS2	P15625	503 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	CLC1	P17891	233 aa		13.87	□□□□□ -0.19
TIR4	YOR009W	SRP54	P20424	541 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	COG8	Q04632	607 aa		13.87	□□□□□ -0.19
TIR4	YOR009W	VPS1	P21576	704 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	SPB4	P25808	606 aa	Predicted RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	RPL8B	P29453	256 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	CST26	P38226	397 aa		13.87	□□□□□ -0.19
TIR4	YOR009W	RXT2	P38255	430 aa		13.87	□□□□□ -0.19
TIR4	YOR009W	RVS167	P39743	482 aa	Known RBP	13.87	□□□□□ -0.19
TIR4	YOR009W	PCI8	P40512	444 aa		13.86	□□□□□ -0.19
TIR4	YOR009W	VPS30	Q02948	557 aa		13.86	□□□□□ -0.19
TIR4	YOR009W	DCS2	Q12123	353 aa		13.86	□□□□□ -0.19
TIR4	YOR009W	APC11	Q12157	165 aa		13.86	□□□□□ -0.19
TIR4	YOR009W	AIM44	Q99299	758 aa		13.86	□□□□□ -0.19
TIR4	YOR009W	TUS1	Q06412	1307 aa		13.85	□□□□□ -0.19
TIR4	YOR009W	MET6	P05694	767 aa	Known RBP	13.85	□□□□□ -0.19
TIR4	YOR009W	ELM1	P32801	640 aa		13.85	□□□□□ -0.19
TIR4	YOR009W	FOL1	P53848	824 aa		13.85	□□□□□ -0.19
TIR4	YOR009W	PGI1	P12709	554 aa	Known RBP	13.84	□□□□□ -0.19
TIR4	YOR009W	NIT1	P40447	199 aa		13.84	□□□□□ -0.19
TIR4	YOR009W	SNU71	P53207	620 aa	Known RBP	13.84	□□□□□ -0.19
TIR4	YOR009W	PIL1	P53252	339 aa	Known RBP	13.84	□□□□□ -0.19
TIR4	YOR009W	KRE33	P53914	1056 aa	Known RBP	13.84	□□□□□ -0.19
TIR4	YOR009W	GDE1	Q02979	1223 aa		13.84	□□□□□ -0.19
TIR4	YOR009W	PUS5	Q06244	254 aa		13.84	□□□□□ -0.19
TIR4	YOR009W	NUC1	P08466	329 aa		13.83	□□□□□ -0.2
TIR4	YOR009W	SAM2	P19358	384 aa	Known RBP	13.83	□□□□□ -0.2
TIR4	YOR009W	KNS1	P32350	737 aa	Predicted RBP	13.83	□□□□□ -0.2
TIR4	YOR009W	CCT5	P40413	562 aa	Known RBP	13.83	□□□□□ -0.2
TIR4	YOR009W	YDR341C	Q05506	607 aa	Known RBP	13.83	□□□□□ -0.2
TIR4	YOR009W	LAP2	Q10740	671 aa		13.83	□□□□□ -0.2
TIR4	YOR009W	GET3	Q12154	354 aa	Known RBP	13.83	□□□□□ -0.2
TIR4	YOR009W	DID4	P36108	232 aa		13.82	□□□□□ -0.2
TIR4	YOR009W	CIT1	P00890	479 aa		13.81	□□□□□ -0.2
TIR4	YOR009W	RPN12	P32496	274 aa		13.81	□□□□□ -0.2
TIR4	YOR009W	MDM1	Q01846	1127 aa		13.81	□□□□□ -0.2
TIR4	YOR009W	DSE3	Q08729	430 aa		13.81	□□□□□ -0.2
TIR4	YOR009W	CLF1	Q12309	687 aa	Predicted RBP	13.81	□□□□□ -0.2
TIR4	YOR009W	CSR2	Q12734	1121 aa		13.81	□□□□□ -0.2
TIR4	YOR009W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.8	□□□□□ -0.2	not detected
TIR4	YOR009W	SPT21	P35209	758 aa		13.8	□□□□□ -0.2
TIR4	YOR009W	TIF4631	P39935	952 aa	Known RBP	13.8	□□□□□ -0.2
TIR4	YOR009W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.8	□□□□□ -0.2	not detected
TIR4	YOR009W	RSM25	P40496	264 aa		13.8	□□□□□ -0.2
TIR4	YOR009W	YGL138C	P53122	345 aa		13.8	□□□□□ -0.2
TIR4	YOR009W	TOM71	P38825	639 aa	Known RBP	13.79	□□□□□ -0.2
TIR4	YOR009W	PES4	P39684	611 aa		13.79	□□□□□ -0.2
TIR4	YOR009W	UBP9	P39967	754 aa		13.79	□□□□□ -0.2
TIR4	YOR009W	GIS4	Q04233	774 aa		13.79	□□□□□ -0.2
TIR4	YOR009W	SUE1	Q06524	206 aa		13.79	□□□□□ -0.2
TIR4	YOR009W	URA1	P28272	314 aa	Predicted RBP	13.78	□□□□□ -0.2
TIR4	YOR009W	NAF1	P53919	492 aa	Known RBP	13.78	□□□□□ -0.2
TIR4	YOR009W	DDP1	Q99321	188 aa	Known RBP	13.78	□□□□□ -0.2
TIR4	YOR009W	HXK1	P04806	485 aa	Known RBP	13.77	□□□□□ -0.21
TIR4	YOR009W	KRS1	P15180	591 aa	Known RBP	13.77	□□□□□ -0.21
TIR4	YOR009W	RGP1	P16664	663 aa		13.77	□□□□□ -0.21
TIR4	YOR009W	ASF1	P32447	279 aa		13.77	□□□□□ -0.21
TIR4	YOR009W	RFT1	P38206	574 aa	Predicted RBP	13.77	□□□□□ -0.21
TIR4	YOR009W	TPS3	P38426	1054 aa	Known RBP	13.77	□□□□□ -0.21
TIR4	YOR009W	MCM4	P30665	933 aa	Known RBP	13.76	□□□□□ -0.21
TIR4	YOR009W	VPS45	P38932	577 aa		13.76	□□□□□ -0.21
TIR4	YOR009W	ACA1	P39970	489 aa		13.76	□□□□□ -0.21
TIR4	YOR009W	PTC5	Q12511	572 aa		13.76	□□□□□ -0.21
TIR4	YOR009W	GAL2	P13181	574 aa		13.75	□□□□□ -0.21
TIR4	YOR009W	MAK11	P20484	414 aa	Known RBP	13.75	□□□□□ -0.21
TIR4	YOR009W	RKM3	P38222	552 aa		13.75	□□□□□ -0.21
TIR4	YOR009W	PEA2	P40091	420 aa		13.75	□□□□□ -0.21
TIR4	YOR009W	CSC1	Q06538	782 aa		13.75	□□□□□ -0.21
TIR4	YOR009W	CEX1	Q12453	761 aa		13.75	□□□□□ -0.21
TIR4	YOR009W	ASE1	P50275	885 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	FAR11	P53917	953 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	GPA1	P08539	472 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	NPR3	P38742	1146 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	YPT11	P48559	417 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	TRS33	Q99394	268 aa		13.74	□□□□□ -0.21
TIR4	YOR009W	CCT3	P39077	534 aa	Known RBP	13.73	□□□□□ -0.21
TIR4	YOR009W	YER130C	P39959	443 aa		13.73	□□□□□ -0.21
TIR4	YOR009W	VHR2	P40041	505 aa		13.73	□□□□□ -0.21
TIR4	YOR009W	RSC1	P53236	928 aa		13.73	□□□□□ -0.21
TIR4	YOR009W	SMD2	Q06217	110 aa	Known RBP	13.72	□□□□□ -0.21
TIR4	YOR009W	ETT1	Q08421	412 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms