RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W SPT16P32558 1035 aaKnown RBP7.7□□□□□ -1.18
SNN1YNL086W APL2P36000 726 aaPredicted RBP7.7□□□□□ -1.18
SNN1YNL086W YDR344CQ05510 147 aa7.7□□□□□ -1.18
SNN1YNL086W MLP1Q02455 1875 aaKnown RBP7.69□□□□□ -1.18
SNN1YNL086W MDJ2P42834 146 aa7.69□□□□□ -1.18
SNN1YNL086W GAS5Q08193 484 aa7.69□□□□□ -1.18
SNN1YNL086W RRG1Q12167 365 aaPredicted RBP7.69□□□□□ -1.18
SNN1YNL086W TRS33Q99394 268 aa7.69□□□□□ -1.18
SNN1YNL086W IXR1P33417 597 aa7.68□□□□□ -1.18
SNN1YNL086W APE3P37302 537 aaKnown RBP7.68□□□□□ -1.18
SNN1YNL086W PPX1P38698 397 aa7.68□□□□□ -1.18
SNN1YNL086W CRF1Q04930 467 aa7.68□□□□□ -1.18
SNN1YNL086W ISR1Q06098 443 aaKnown RBP7.68□□□□□ -1.18
SNN1YNL086W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
SNN1YNL086W CBP1P07252 654 aa7.67□□□□□ -1.18
SNN1YNL086W MOT2P34909 587 aaKnown RBP7.67□□□□□ -1.18
SNN1YNL086W BOL3P39724 118 aa7.67□□□□□ -1.18
SNN1YNL086W AIM9P40053 627 aaKnown RBP7.67□□□□□ -1.18
SNN1YNL086W RRT6P53117 311 aaPredicted RBP7.67□□□□□ -1.18
SNN1YNL086W VPS64Q03944 604 aa7.67□□□□□ -1.18
SNN1YNL086W YPR015CQ12531 247 aa7.67□□□□□ -1.18
SNN1YNL086W MIP1P15801 1254 aa7.66□□□□□ -1.18
SNN1YNL086W NTH2P35172 780 aa7.66□□□□□ -1.18
SNN1YNL086W GSM1P42950 618 aa7.66□□□□□ -1.18
SNN1YNL086W POL32P47110 350 aa7.66□□□□□ -1.18
SNN1YNL086W YML082WQ04533 649 aaKnown RBP7.66□□□□□ -1.18
SNN1YNL086W GLO3P38682 493 aaKnown RBP7.65□□□□□ -1.18
SNN1YNL086W ACF4P47129 309 aa7.65□□□□□ -1.18
SNN1YNL086W YVH1Q02256 364 aaKnown RBP7.65□□□□□ -1.18
SNN1YNL086W HAL5P38970 855 aaKnown RBP7.64□□□□□ -1.19
SNN1YNL086W SGD1Q06132 899 aa7.64□□□□□ -1.19
SNN1YNL086W HDA3Q06623 655 aa7.64□□□□□ -1.19
SNN1YNL086W SSK22P25390 1331 aaPredicted RBP7.63□□□□□ -1.19
SNN1YNL086W QDR1P40475 563 aa7.63□□□□□ -1.19
SNN1YNL086W MOD5P07884 428 aa7.62□□□□□ -1.19
SNN1YNL086W UGA3P26370 528 aa7.62□□□□□ -1.19
SNN1YNL086W PKH1Q03407 766 aa7.62□□□□□ -1.19
SNN1YNL086W RBA50Q04418 439 aa7.62□□□□□ -1.19
SNN1YNL086W RRP15Q06511 250 aaPredicted RBP7.62□□□□□ -1.19
SNN1YNL086W FBP1P09201 348 aa7.61□□□□□ -1.19
SNN1YNL086W ZDS2P54786 942 aa7.61□□□□□ -1.19
SNN1YNL086W NSE3Q05541 303 aa7.61□□□□□ -1.19
SNN1YNL086W WHI5Q12416 295 aa7.61□□□□□ -1.19
SNN1YNL086W FLO11P08640 1367 aa7.6□□□□□ -1.19
SNN1YNL086W KIP2P28743 706 aa7.6□□□□□ -1.19
SNN1YNL086W ASH1P34233 588 aa7.6□□□□□ -1.19
SNN1YNL086W PDS5Q04264 1277 aa7.6□□□□□ -1.19
SNN1YNL086W SVF1Q05515 481 aa7.6□□□□□ -1.19
SNN1YNL086W NUT2Q06213 157 aa7.6□□□□□ -1.19
SNN1YNL086W LYS2P07702 1392 aa7.59□□□□□ -1.19
SNN1YNL086W TRK1P12685 1235 aa7.59□□□□□ -1.19
SNN1YNL086W ATE1P16639 503 aa7.59□□□□□ -1.19
SNN1YNL086W KRE2P27809 442 aa7.59□□□□□ -1.19
SNN1YNL086W PAH1P32567 862 aa7.59□□□□□ -1.19
SNN1YNL086W MGE1P38523 228 aa7.59□□□□□ -1.19
SNN1YNL086W RPT4P53549 437 aaKnown RBP7.59□□□□□ -1.19
SNN1YNL086W GYP1Q08484 637 aa7.59□□□□□ -1.19
SNN1YNL086W LSO1Q3E827 93 aa7.59□□□□□ -1.19
SNN1YNL086W CYT1P07143 309 aa7.58□□□□□ -1.2
SNN1YNL086W PRE3P38624 215 aa7.58□□□□□ -1.2
SNN1YNL086W UBX2Q04228 584 aa7.58□□□□□ -1.2
SNN1YNL086W DPH6Q12429 685 aa7.58□□□□□ -1.2
SNN1YNL086W HKR1P41809 1802 aa7.57□□□□□ -1.2
SNN1YNL086W RPS6AP0CX37 236 aaKnown RBP7.57□□□□□ -1.2
SNN1YNL086W RPS6BP0CX38 236 aaPredicted RBP7.57□□□□□ -1.2
SNN1YNL086W SPR3P41901 512 aa7.57□□□□□ -1.2
SNN1YNL086W FCP1Q03254 732 aa7.57□□□□□ -1.2
SNN1YNL086W YLR225CQ05948 407 aaKnown RBP7.57□□□□□ -1.2
SNN1YNL086W FRT1Q99332 602 aa7.57□□□□□ -1.2
SNN1YNL086W SUV3P32580 737 aa7.56□□□□□ -1.2
SNN1YNL086W NGR1P32831 672 aaKnown RBP7.56□□□□□ -1.2
SNN1YNL086W POL5P39985 1022 aaKnown RBP7.56□□□□□ -1.2
SNN1YNL086W AIR2Q12476 344 aaKnown RBP7.56□□□□□ -1.2
SNN1YNL086W UTR2P32623 467 aa7.55□□□□□ -1.2
SNN1YNL086W ICP55P40051 511 aa7.55□□□□□ -1.2
SNN1YNL086W EMW1P42842 904 aaKnown RBP7.55□□□□□ -1.2
SNN1YNL086W ULP1Q02724 621 aa7.55□□□□□ -1.2
SNN1YNL086W YPR117WQ06116 2489 aa7.55□□□□□ -1.2
SNN1YNL086W SPT2P06843 333 aaPredicted RBP7.54□□□□□ -1.2
SNN1YNL086W RPS7AP26786 190 aaKnown RBP7.54□□□□□ -1.2
SNN1YNL086W MRF1P30775 413 aaPredicted RBP7.54□□□□□ -1.2
SNN1YNL086W SEC8P32855 1065 aa7.54□□□□□ -1.2
SNN1YNL086W YBR287WP38355 427 aa7.54□□□□□ -1.2
SNN1YNL086W SYH1Q02875 849 aaKnown RBP7.54□□□□□ -1.2
SNN1YNL086W OYE2Q03558 400 aaKnown RBP7.54□□□□□ -1.2
SNN1YNL086W PRP42Q03776 544 aaKnown RBP7.54□□□□□ -1.2
SNN1YNL086W SWI5P08153 709 aa7.53□□□□□ -1.2
SNN1YNL086W CHL1P22516 861 aaPredicted RBP7.53□□□□□ -1.2
SNN1YNL086W TBS1P38114 1094 aa7.53□□□□□ -1.2
SNN1YNL086W SPL2P38839 148 aa7.53□□□□□ -1.2
SNN1YNL086W UTP7P40055 554 aaKnown RBP7.53□□□□□ -1.2
SNN1YNL086W PSF2P40359 213 aa7.53□□□□□ -1.2
SNN1YNL086W NIT1P40447 199 aa7.53□□□□□ -1.2
SNN1YNL086W TOS4Q06266 489 aa7.53□□□□□ -1.2
SNN1YNL086W RPP2BP02400 110 aaKnown RBP7.52□□□□□ -1.21
SNN1YNL086W MET4P32389 672 aa7.52□□□□□ -1.21
SNN1YNL086W CLA4P48562 842 aa7.52□□□□□ -1.21
SNN1YNL086W YNL050CP53952 270 aa7.52□□□□□ -1.21
SNN1YNL086W ISU1Q03020 165 aa7.52□□□□□ -1.21
SNN1YNL086W TRS120Q04183 1289 aa7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms