RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ECM23Q02710 187 aa4.49□□□□□ -1.69
USA1YML029W RBA50Q04418 439 aa4.49□□□□□ -1.69
USA1YML029W YDL124WQ07551 312 aaKnown RBP4.49□□□□□ -1.69
USA1YML029W ANP1P32629 500 aa4.49□□□□□ -1.69
USA1YML029W PTK2P47116 818 aaKnown RBP4.49□□□□□ -1.69
USA1YML029W UFD2P54860 961 aa4.49□□□□□ -1.69
USA1YML029W TRL1P09880 827 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W GAP1P19145 602 aaPredicted RBP4.48□□□□□ -1.69
USA1YML029W MOT2P34909 587 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W RER2P35196 286 aa4.48□□□□□ -1.69
USA1YML029W ACA1P39970 489 aa4.48□□□□□ -1.69
USA1YML029W AIM9P40053 627 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W MYO5Q04439 1219 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W EST2Q06163 884 aa4.48□□□□□ -1.69
USA1YML029W TY1B-AO13527 1196 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W CBP3P21560 335 aa4.48□□□□□ -1.69
USA1YML029W SIS1P25294 352 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W APE3P37302 537 aaKnown RBP4.48□□□□□ -1.69
USA1YML029W MAL31P38156 614 aa4.48□□□□□ -1.69
USA1YML029W YHL017WP38745 532 aa4.48□□□□□ -1.69
USA1YML029W VPS8P39702 1274 aa4.48□□□□□ -1.69
USA1YML029W VID27P40157 782 aa4.48□□□□□ -1.69
USA1YML029W AIM44Q99299 758 aa4.48□□□□□ -1.69
USA1YML029W MATALPHA2P0CY08 210 aa4.47□□□□□ -1.69
USA1YML029W HMLALPHA2P0CY09 210 aa4.47□□□□□ -1.69
USA1YML029W PCT1P13259 424 aa4.47□□□□□ -1.69
USA1YML029W BMH2P34730 273 aaKnown RBP4.47□□□□□ -1.69
USA1YML029W TTI1P36097 1038 aa4.47□□□□□ -1.69
USA1YML029W YHL050CP38721 697 aa4.47□□□□□ -1.69
USA1YML029W GPB2P39717 880 aa4.47□□□□□ -1.69
USA1YML029W SLX8P40072 274 aa4.47□□□□□ -1.69
USA1YML029W TPM2P40414 161 aa4.47□□□□□ -1.69
USA1YML029W SPR3P41901 512 aa4.47□□□□□ -1.69
USA1YML029W FOL1P53848 824 aa4.47□□□□□ -1.69
USA1YML029W NSG2P53898 299 aa4.47□□□□□ -1.69
USA1YML029W GUD1Q07729 489 aa4.47□□□□□ -1.69
USA1YML029W MAM3Q12296 706 aa4.47□□□□□ -1.69
USA1YML029W MAK31P23059 88 aa4.47□□□□□ -1.69
USA1YML029W YKE2P52553 114 aa4.47□□□□□ -1.69
USA1YML029W RPT6Q01939 405 aaKnown RBP4.47□□□□□ -1.69
USA1YML029W CEX1Q12453 761 aa4.47□□□□□ -1.69
USA1YML029W NUC1P08466 329 aa4.46□□□□□ -1.69
USA1YML029W PFK2P16862 959 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
USA1YML029W TIM23P32897 222 aa4.46□□□□□ -1.69
USA1YML029W VPS45P38932 577 aa4.46□□□□□ -1.69
USA1YML029W CCT3P39077 534 aaKnown RBP4.46□□□□□ -1.69
USA1YML029W KRI1P42846 591 aaKnown RBP4.46□□□□□ -1.69
USA1YML029W LSB1P53281 241 aa4.46□□□□□ -1.69
USA1YML029W GDE1Q02979 1223 aa4.46□□□□□ -1.69
USA1YML029W LSP1Q12230 341 aaKnown RBP4.46□□□□□ -1.69
USA1YML029W CDC19P00549 500 aaKnown RBP4.46□□□□□ -1.7
USA1YML029W SRS2P12954 1174 aa4.46□□□□□ -1.7
USA1YML029W RNR3P21672 869 aaKnown RBP4.46□□□□□ -1.7
USA1YML029W PKC1P24583 1151 aa4.46□□□□□ -1.7
USA1YML029W FBP26P32604 452 aa4.46□□□□□ -1.7
USA1YML029W CIC1P38779 376 aaKnown RBP4.46□□□□□ -1.7
USA1YML029W ALD6P54115 500 aaKnown RBP4.46□□□□□ -1.7
USA1YML029W RPL8BP29453 256 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W SEC8P32855 1065 aa4.45□□□□□ -1.7
USA1YML029W ERG7P38604 731 aa4.45□□□□□ -1.7
USA1YML029W MXR1P40029 184 aa4.45□□□□□ -1.7
USA1YML029W NCS6P53088 359 aa4.45□□□□□ -1.7
USA1YML029W DUS1P53759 423 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W CFT2Q12102 859 aaPredicted RBP4.45□□□□□ -1.7
USA1YML029W PGA3Q12746 312 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W TUB2P02557 457 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W RIT1P23796 513 aa4.45□□□□□ -1.7
USA1YML029W MRM1P25270 412 aa4.45□□□□□ -1.7
USA1YML029W SRO9P25567 434 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W CDC60P26637 1090 aaKnown RBP4.45□□□□□ -1.7
USA1YML029W IME2P32581 645 aa4.45□□□□□ -1.7
USA1YML029W MCD4P36051 919 aa4.45□□□□□ -1.7
USA1YML029W MDM1Q01846 1127 aa4.45□□□□□ -1.7
USA1YML029W TFC6Q06339 672 aa4.45□□□□□ -1.7
USA1YML029W MAK11P20484 414 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W TFB3Q03290 321 aa4.44□□□□□ -1.7
USA1YML029W YLR407WQ06070 228 aa4.44□□□□□ -1.7
USA1YML029W ESF1Q06344 628 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W DSE3Q08729 430 aa4.44□□□□□ -1.7
USA1YML029W CHO2P05374 869 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W IMP2'P32351 346 aa4.44□□□□□ -1.7
USA1YML029W BCH2P36122 765 aa4.44□□□□□ -1.7
USA1YML029W HYR1P40581 163 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W NAF1P53919 492 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W VPS30Q02948 557 aa4.44□□□□□ -1.7
USA1YML029W VPS20Q04272 221 aa4.44□□□□□ -1.7
USA1YML029W YLR225CQ05948 407 aaKnown RBP4.44□□□□□ -1.7
USA1YML029W LAP2Q10740 671 aa4.44□□□□□ -1.7
USA1YML029W YPL150WQ12152 901 aa4.44□□□□□ -1.7
USA1YML029W PGI1P12709 554 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W AIM21P40563 679 aa4.43□□□□□ -1.7
USA1YML029W YGR125WP53273 1036 aa4.43□□□□□ -1.7
USA1YML029W VIP1Q06685 1146 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W RPL22AP05749 121 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W PWP2P25635 923 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W CHS3P29465 1165 aa4.43□□□□□ -1.7
USA1YML029W VPS24P36095 224 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W UBP9P39967 754 aa4.43□□□□□ -1.7
USA1YML029W VID28P40547 921 aa4.43□□□□□ -1.7
USA1YML029W NPA3P47122 385 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms