RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C UTP22P53254 1237 aaPredicted RBP4.7□□□□□ -1.66
AFB1YLR040C ULP1Q02724 621 aa4.7□□□□□ -1.66
AFB1YLR040C RRP15Q06511 250 aaPredicted RBP4.7□□□□□ -1.66
AFB1YLR040C YIG1Q08956 461 aa4.7□□□□□ -1.66
AFB1YLR040C REC8Q12188 680 aa4.7□□□□□ -1.66
AFB1YLR040C HXK1P04806 485 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C TY1A-LR4P0C2I8 440 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C TY1A-DR6P0CX70 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-ER1P0CX71 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-LR2P0CX72 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-PLP0CX73 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-JR1P0CX74 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-LR3P0CX75 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-ML2P0CX76 440 aa4.69□□□□□ -1.66
AFB1YLR040C PGM1P33401 570 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C EXO5P38289 585 aa4.69□□□□□ -1.66
AFB1YLR040C FAR11P53917 953 aa4.69□□□□□ -1.66
AFB1YLR040C YMR074CQ04773 145 aa4.69□□□□□ -1.66
AFB1YLR040C OXR1Q08952 273 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-GR1Q12085 440 aa4.69□□□□□ -1.66
AFB1YLR040C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C TY1A-OLQ92392 440 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C GLT1Q12680 2145 aaKnown RBP4.69□□□□□ -1.66
AFB1YLR040C MCM2P29469 868 aa4.68□□□□□ -1.66
AFB1YLR040C SLS1P42900 643 aa4.68□□□□□ -1.66
AFB1YLR040C MEC3Q02574 474 aa4.68□□□□□ -1.66
AFB1YLR040C NOG1Q02892 647 aaKnown RBP4.68□□□□□ -1.66
AFB1YLR040C ALG6Q12001 544 aaKnown RBP4.68□□□□□ -1.66
AFB1YLR040C YKL077WP36081 392 aa4.67□□□□□ -1.66
AFB1YLR040C AKR1P39010 764 aa4.67□□□□□ -1.66
AFB1YLR040C GCV1P48015 400 aa4.67□□□□□ -1.66
AFB1YLR040C PEX13P80667 386 aa4.67□□□□□ -1.66
AFB1YLR040C KAR2P16474 682 aaKnown RBP4.66□□□□□ -1.66
AFB1YLR040C MSH3P25336 1018 aa4.66□□□□□ -1.66
AFB1YLR040C SEC8P32855 1065 aa4.66□□□□□ -1.66
AFB1YLR040C REI1P38344 393 aaPredicted RBP4.66□□□□□ -1.66
AFB1YLR040C YPL109CQ02981 657 aa4.66□□□□□ -1.66
AFB1YLR040C ADI1Q03677 179 aa4.66□□□□□ -1.66
AFB1YLR040C YOR223WQ12015 292 aa4.66□□□□□ -1.66
AFB1YLR040C HEM13P11353 328 aaKnown RBP4.65□□□□□ -1.67
AFB1YLR040C GPT2P36148 743 aa4.65□□□□□ -1.67
AFB1YLR040C SAF1P38352 637 aa4.65□□□□□ -1.67
AFB1YLR040C MGE1P38523 228 aa4.65□□□□□ -1.67
AFB1YLR040C NEM1P38757 446 aa4.65□□□□□ -1.67
AFB1YLR040C PEX28P38848 579 aa4.65□□□□□ -1.67
AFB1YLR040C RPS26AP39938 119 aaKnown RBP4.65□□□□□ -1.67
AFB1YLR040C RPS26BP39939 119 aaKnown RBP4.65□□□□□ -1.67
AFB1YLR040C PIC2P40035 300 aa4.65□□□□□ -1.67
AFB1YLR040C YJR107WP47145 328 aa4.65□□□□□ -1.67
AFB1YLR040C YGR045CP53229 120 aa4.65□□□□□ -1.67
AFB1YLR040C DOT1Q04089 582 aaKnown RBP4.65□□□□□ -1.67
AFB1YLR040C SPR28Q04921 423 aa4.65□□□□□ -1.67
AFB1YLR040C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
AFB1YLR040C SBP1P10080 294 aaKnown RBP4.64□□□□□ -1.67
AFB1YLR040C COQ2P32378 372 aa4.64□□□□□ -1.67
AFB1YLR040C FYV10P40492 516 aa4.64□□□□□ -1.67
AFB1YLR040C RSM26P47141 266 aa4.64□□□□□ -1.67
AFB1YLR040C YGR122WP53272 402 aa4.64□□□□□ -1.67
AFB1YLR040C GIC2Q06648 383 aa4.64□□□□□ -1.67
AFB1YLR040C YLL054CQ12244 843 aa4.64□□□□□ -1.67
AFB1YLR040C YLR122CQ12312 125 aa4.64□□□□□ -1.67
AFB1YLR040C RAD2P07276 1031 aa4.63□□□□□ -1.67
AFB1YLR040C CYC8P14922 966 aa4.63□□□□□ -1.67
AFB1YLR040C ARL1P38116 183 aaKnown RBP4.63□□□□□ -1.67
AFB1YLR040C SHU2P38957 223 aa4.63□□□□□ -1.67
AFB1YLR040C YGL140CP53120 1219 aa4.63□□□□□ -1.67
AFB1YLR040C ELA1P53861 379 aaPredicted RBP4.63□□□□□ -1.67
AFB1YLR040C UTP5Q04177 643 aaKnown RBP4.63□□□□□ -1.67
AFB1YLR040C TRP3P00937 484 aa4.62□□□□□ -1.67
AFB1YLR040C SQT1P35184 431 aa4.62□□□□□ -1.67
AFB1YLR040C KAE1P36132 386 aa4.62□□□□□ -1.67
AFB1YLR040C RDH54P38086 958 aa4.62□□□□□ -1.67
AFB1YLR040C MRPS18P42847 217 aa4.62□□□□□ -1.67
AFB1YLR040C SPO74P45819 413 aa4.62□□□□□ -1.67
AFB1YLR040C ALO1P54783 526 aaKnown RBP4.62□□□□□ -1.67
AFB1YLR040C CHS2P14180 963 aa4.61□□□□□ -1.67
AFB1YLR040C PRE9P23638 258 aaKnown RBP4.61□□□□□ -1.67
AFB1YLR040C MSH4P40965 878 aaPredicted RBP4.61□□□□□ -1.67
AFB1YLR040C YGR130CP53278 816 aa4.61□□□□□ -1.67
AFB1YLR040C OYE2Q03558 400 aaKnown RBP4.61□□□□□ -1.67
AFB1YLR040C AVO1Q08236 1176 aa4.61□□□□□ -1.67
AFB1YLR040C XKS1P42826 600 aa4.6□□□□□ -1.67
AFB1YLR040C MTR4P47047 1073 aaKnown RBP4.6□□□□□ -1.67
AFB1YLR040C EAR1Q03212 550 aa4.6□□□□□ -1.67
AFB1YLR040C SEC23P15303 768 aaKnown RBP4.59□□□□□ -1.67
AFB1YLR040C VMA4P22203 233 aaKnown RBP4.59□□□□□ -1.67
AFB1YLR040C WHI3P34761 661 aaKnown RBP4.59□□□□□ -1.67
AFB1YLR040C YNR063WP53749 607 aa4.59□□□□□ -1.67
AFB1YLR040C MCD1Q12158 566 aa4.59□□□□□ -1.67
AFB1YLR040C RPS4AP0CX35 261 aaKnown RBP4.58□□□□□ -1.68
AFB1YLR040C RPS4BP0CX36 261 aaKnown RBP4.58□□□□□ -1.68
AFB1YLR040C ASF1P32447 279 aa4.58□□□□□ -1.68
AFB1YLR040C PEP7P32609 515 aa4.58□□□□□ -1.68
AFB1YLR040C YKR073CP36153 106 aa4.58□□□□□ -1.68
AFB1YLR040C ALT1P52893 592 aa4.58□□□□□ -1.68
AFB1YLR040C GCR1P07261 785 aa4.57□□□□□ -1.68
AFB1YLR040C MSB1P21339 1137 aaKnown RBP4.57□□□□□ -1.68
AFB1YLR040C NFS1P25374 497 aa4.57□□□□□ -1.68
AFB1YLR040C YAR028WP39548 234 aa4.57□□□□□ -1.68
AFB1YLR040C EST2Q06163 884 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms