RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	EXO5	P38289	585 aa		4.96	□□□□□ -1.62
TPK3	YKL166C	RSM26	P47141	266 aa		4.96	□□□□□ -1.62
TPK3	YKL166C	UTP22	P53254	1237 aa	Predicted RBP	4.96	□□□□□ -1.62
TPK3	YKL166C	TDA6	Q06466	467 aa		4.96	□□□□□ -1.62
TPK3	YKL166C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-DR6	P0CX70	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-ER1	P0CX71	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-LR2	P0CX72	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-PL	P0CX73	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-JR1	P0CX74	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-LR3	P0CX75	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-ML2	P0CX76	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	SQT1	P35184	431 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	MCX1	P38323	520 aa	Predicted RBP	4.95	□□□□□ -1.62
TPK3	YKL166C	PEX28	P38848	579 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	SHU2	P38957	223 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
TPK3	YKL166C	NSG2	P53898	299 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-GR1	Q12085	440 aa		4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.95	□□□□□ -1.62
TPK3	YKL166C	TY1A-OL	Q92392	440 aa	Known RBP	4.95	□□□□□ -1.62
TPK3	YKL166C	YKL077W	P36081	392 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	RRM3	P38766	723 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	GCV1	P48015	400 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	YGL140C	P53120	1219 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	NOP7	P53261	605 aa	Known RBP	4.94	□□□□□ -1.62
TPK3	YKL166C	DSE4	P53753	1117 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	PEX13	P80667	386 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	ELG1	Q12050	791 aa		4.94	□□□□□ -1.62
TPK3	YKL166C	HEM13	P11353	328 aa	Known RBP	4.93	□□□□□ -1.62
TPK3	YKL166C	SEC23	P15303	768 aa	Known RBP	4.93	□□□□□ -1.62
TPK3	YKL166C	RDH54	P38086	958 aa		4.93	□□□□□ -1.62
TPK3	YKL166C	ICP55	P40051	511 aa		4.93	□□□□□ -1.62
TPK3	YKL166C	BUD9	P53226	547 aa		4.93	□□□□□ -1.62
TPK3	YKL166C	MEC3	Q02574	474 aa		4.93	□□□□□ -1.62
TPK3	YKL166C	PUS1	Q12211	544 aa	Known RBP	4.93	□□□□□ -1.62
TPK3	YKL166C	ERS1	P17261	260 aa		4.92	□□□□□ -1.62
TPK3	YKL166C	MAE1	P36013	669 aa	Known RBP	4.92	□□□□□ -1.62
TPK3	YKL166C	ARL1	P38116	183 aa	Known RBP	4.92	□□□□□ -1.62
TPK3	YKL166C	NEM1	P38757	446 aa		4.92	□□□□□ -1.62
TPK3	YKL166C	FAR11	P53917	953 aa		4.92	□□□□□ -1.62
TPK3	YKL166C	GAS5	Q08193	484 aa		4.92	□□□□□ -1.62
TPK3	YKL166C	TY1A-NL1	Q12391	440 aa	Known RBP	4.92	□□□□□ -1.62
TPK3	YKL166C	VMA4	P22203	233 aa	Known RBP	4.91	□□□□□ -1.62
TPK3	YKL166C	NAP1	P25293	417 aa	Known RBP	4.91	□□□□□ -1.62
TPK3	YKL166C	MNR2	P35724	969 aa		4.91	□□□□□ -1.62
TPK3	YKL166C	MET10	P39692	1035 aa		4.91	□□□□□ -1.62
TPK3	YKL166C	XKS1	P42826	600 aa		4.91	□□□□□ -1.62
TPK3	YKL166C	SLS1	P42900	643 aa		4.91	□□□□□ -1.62
TPK3	YKL166C	JIP5	Q06214	492 aa	Predicted RBP	4.91	□□□□□ -1.62
TPK3	YKL166C	PHM7	Q12252	991 aa		4.91	□□□□□ -1.62
TPK3	YKL166C	AI3	P03877	415 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	GCR1	P07261	785 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	TAF13	P11747	167 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	YCK2	P23292	546 aa	Known RBP	4.9	□□□□□ -1.63
TPK3	YKL166C	SFA1	P32771	386 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	PET112	P33893	541 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	REI1	P38344	393 aa	Predicted RBP	4.9	□□□□□ -1.63
TPK3	YKL166C	GNP1	P48813	663 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	YMR187C	Q03236	431 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	UTP5	Q04177	643 aa	Known RBP	4.9	□□□□□ -1.63
TPK3	YKL166C	YDR215C	Q12240	137 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	YLL054C	Q12244	843 aa		4.9	□□□□□ -1.63
TPK3	YKL166C	DUT1	P33317	147 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	PRY1	P47032	299 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	MTR4	P47047	1073 aa	Known RBP	4.89	□□□□□ -1.63
TPK3	YKL166C	KIP3	P53086	805 aa	Known RBP	4.89	□□□□□ -1.63
TPK3	YKL166C	NCE103	P53615	221 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	VPS16	Q03308	798 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	YMR074C	Q04773	145 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	HDA2	Q06629	674 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	PIN2	Q12057	282 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	YPR053C	Q6Q5F3	151 aa		4.89	□□□□□ -1.63
TPK3	YKL166C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TPK3	YKL166C	CDC34	P14682	295 aa		4.88	□□□□□ -1.63
TPK3	YKL166C	SLN1	P39928	1220 aa	Predicted RBP	4.88	□□□□□ -1.63
TPK3	YKL166C	MAG2	Q06436	670 aa	Known RBP	4.88	□□□□□ -1.63
TPK3	YKL166C	MRL1	Q06815	381 aa		4.88	□□□□□ -1.63
TPK3	YKL166C	RTT10	Q08924	1013 aa		4.88	□□□□□ -1.63
TPK3	YKL166C	YOR223W	Q12015	292 aa		4.88	□□□□□ -1.63
TPK3	YKL166C	REC8	Q12188	680 aa		4.88	□□□□□ -1.63
TPK3	YKL166C	CLN2	P20438	545 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	SKN7	P38889	622 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	HXT13	P39924	564 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	MAD1	P40957	749 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	HXT17	P53631	564 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	SIW14	P53965	281 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	HXT15	P54854	567 aa		4.87	□□□□□ -1.63
TPK3	YKL166C	ALG6	Q12001	544 aa	Known RBP	4.87	□□□□□ -1.63
TPK3	YKL166C	RSC6	P25632	483 aa		4.86	□□□□□ -1.63
TPK3	YKL166C	ENT3	P47160	408 aa		4.86	□□□□□ -1.63
TPK3	YKL166C	ARI1	P53111	347 aa	Known RBP	4.86	□□□□□ -1.63
TPK3	YKL166C	YGR045C	P53229	120 aa		4.86	□□□□□ -1.63
TPK3	YKL166C	DOT1	Q04089	582 aa	Known RBP	4.86	□□□□□ -1.63
TPK3	YKL166C	ADD66	P36040	267 aa		4.85	□□□□□ -1.63
TPK3	YKL166C	SPO74	P45819	413 aa		4.85	□□□□□ -1.63
TPK3	YKL166C	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
TPK3	YKL166C	EST2	Q06163	884 aa		4.85	□□□□□ -1.63
TPK3	YKL166C	TAT1	P38085	619 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms