RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W AHC1Q12433 566 aa7.91□□□□□ -1.14
MDH1YKL085W UBR2Q07963 1872 aa7.9□□□□□ -1.14
MDH1YKL085W SRM1P21827 482 aa7.9□□□□□ -1.14
MDH1YKL085W YNG2P38806 282 aaKnown RBP7.9□□□□□ -1.14
MDH1YKL085W SPO1P53541 631 aa7.9□□□□□ -1.14
MDH1YKL085W SKG3Q06315 1026 aa7.9□□□□□ -1.14
MDH1YKL085W RLF2Q12495 606 aa7.9□□□□□ -1.14
MDH1YKL085W DAL5P15365 543 aa7.89□□□□□ -1.15
MDH1YKL085W RGT1P32862 1170 aa7.89□□□□□ -1.15
MDH1YKL085W NPL4P33755 580 aa7.89□□□□□ -1.15
MDH1YKL085W YPL260WQ08977 551 aa7.89□□□□□ -1.15
MDH1YKL085W LDB19Q12502 818 aa7.89□□□□□ -1.15
MDH1YKL085W DBP1P24784 617 aaKnown RBP7.88□□□□□ -1.15
MDH1YKL085W KTR2P33550 425 aa7.88□□□□□ -1.15
MDH1YKL085W GEF1P37020 779 aa7.88□□□□□ -1.15
MDH1YKL085W FUN12P39730 1002 aaKnown RBP7.88□□□□□ -1.15
MDH1YKL085W YAP5P40574 245 aa7.88□□□□□ -1.15
MDH1YKL085W YGL242CP53066 181 aa7.88□□□□□ -1.15
MDH1YKL085W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
MDH1YKL085W CDC45Q08032 650 aa7.88□□□□□ -1.15
MDH1YKL085W RVB2Q12464 471 aaKnown RBP7.88□□□□□ -1.15
MDH1YKL085W MIP1P15801 1254 aa7.87□□□□□ -1.15
MDH1YKL085W KAR5Q04746 504 aa7.87□□□□□ -1.15
MDH1YKL085W UTR4P32626 227 aa7.86□□□□□ -1.15
MDH1YKL085W YHL050CP38721 697 aa7.86□□□□□ -1.15
MDH1YKL085W YMR147WP40218 223 aaKnown RBP7.86□□□□□ -1.15
MDH1YKL085W IOC3P43596 787 aa7.86□□□□□ -1.15
MDH1YKL085W VPS70P47161 811 aa7.86□□□□□ -1.15
MDH1YKL085W ALD6P54115 500 aaKnown RBP7.86□□□□□ -1.15
MDH1YKL085W ALO1P54783 526 aaKnown RBP7.86□□□□□ -1.15
MDH1YKL085W BUL2Q03758 920 aaKnown RBP7.86□□□□□ -1.15
MDH1YKL085W CHS3P29465 1165 aa7.85□□□□□ -1.15
MDH1YKL085W RAM2P29703 316 aa7.85□□□□□ -1.15
MDH1YKL085W PTK2P47116 818 aaKnown RBP7.85□□□□□ -1.15
MDH1YKL085W YAF9P53930 226 aa7.85□□□□□ -1.15
MDH1YKL085W NCB2Q92317 146 aa7.85□□□□□ -1.15
MDH1YKL085W CDC19P00549 500 aaKnown RBP7.84□□□□□ -1.15
MDH1YKL085W RAD18P10862 487 aa7.84□□□□□ -1.15
MDH1YKL085W SRP40P32583 406 aaPredicted RBP7.84□□□□□ -1.15
MDH1YKL085W MSC7P38694 644 aa7.84□□□□□ -1.15
MDH1YKL085W NOC2P39744 710 aaKnown RBP7.84□□□□□ -1.15
MDH1YKL085W IRC8P47046 822 aa7.84□□□□□ -1.15
MDH1YKL085W SCS3P53012 380 aa7.84□□□□□ -1.15
MDH1YKL085W YGR125WP53273 1036 aa7.84□□□□□ -1.15
MDH1YKL085W MOT1P32333 1867 aa7.83□□□□□ -1.16
MDH1YKL085W NOT3P06102 836 aaKnown RBP7.83□□□□□ -1.16
MDH1YKL085W SAM2P19358 384 aaKnown RBP7.83□□□□□ -1.16
MDH1YKL085W YUR1P26725 428 aa7.83□□□□□ -1.16
MDH1YKL085W GRS1P38088 690 aaKnown RBP7.83□□□□□ -1.16
MDH1YKL085W BDP1P46678 594 aa7.83□□□□□ -1.16
MDH1YKL085W SOL4P53315 255 aa7.83□□□□□ -1.16
MDH1YKL085W YPR148CQ06523 435 aa7.83□□□□□ -1.16
MDH1YKL085W IOC2Q12072 812 aa7.83□□□□□ -1.16
MDH1YKL085W YKR018CP36114 725 aa7.82□□□□□ -1.16
MDH1YKL085W VPS29P38759 282 aa7.82□□□□□ -1.16
MDH1YKL085W TOM71P38825 639 aaKnown RBP7.82□□□□□ -1.16
MDH1YKL085W RTS1P38903 757 aa7.82□□□□□ -1.16
MDH1YKL085W VID27P40157 782 aa7.82□□□□□ -1.16
MDH1YKL085W SKP2P42843 763 aa7.82□□□□□ -1.16
MDH1YKL085W PIB2P53191 635 aa7.82□□□□□ -1.16
MDH1YKL085W YDR524C-BQ3E6R4 66 aa7.82□□□□□ -1.16
MDH1YKL085W SAM1P10659 382 aaKnown RBP7.81□□□□□ -1.16
MDH1YKL085W TGL1P34163 548 aa7.81□□□□□ -1.16
MDH1YKL085W SHP1P34223 423 aa7.81□□□□□ -1.16
MDH1YKL085W PHO88P38264 188 aaPredicted RBP7.81□□□□□ -1.16
MDH1YKL085W YHR131CP38835 850 aa7.81□□□□□ -1.16
MDH1YKL085W ULI1P43604 169 aa7.81□□□□□ -1.16
MDH1YKL085W YRB30P53107 440 aaPredicted RBP7.81□□□□□ -1.16
MDH1YKL085W MLC1P53141 149 aa7.81□□□□□ -1.16
MDH1YKL085W YGL039WP53183 348 aaKnown RBP7.81□□□□□ -1.16
MDH1YKL085W PKH3Q03306 898 aaPredicted RBP7.81□□□□□ -1.16
MDH1YKL085W RMD1Q03441 430 aa7.81□□□□□ -1.16
MDH1YKL085W TMA64Q04600 565 aaKnown RBP7.81□□□□□ -1.16
MDH1YKL085W RAD61Q99359 647 aa7.81□□□□□ -1.16
MDH1YKL085W TOR2P32600 2474 aaKnown RBP7.8□□□□□ -1.16
MDH1YKL085W PDC1P06169 563 aaKnown RBP7.8□□□□□ -1.16
MDH1YKL085W COQ1P18900 473 aa7.8□□□□□ -1.16
MDH1YKL085W BBC1P47068 1157 aa7.8□□□□□ -1.16
MDH1YKL085W YDR461C-AQ2V2P7 80 aa7.8□□□□□ -1.16
MDH1YKL085W LAM4P38800 1345 aa7.79□□□□□ -1.16
MDH1YKL085W CHO2P05374 869 aaKnown RBP7.79□□□□□ -1.16
MDH1YKL085W HEM1P09950 548 aaPredicted RBP7.79□□□□□ -1.16
MDH1YKL085W POX1P13711 748 aa7.79□□□□□ -1.16
MDH1YKL085W ECM21P38167 1117 aaKnown RBP7.79□□□□□ -1.16
MDH1YKL085W SLD5Q03406 294 aa7.79□□□□□ -1.16
MDH1YKL085W MSC6Q08818 692 aaKnown RBP7.79□□□□□ -1.16
MDH1YKL085W MYO1P08964 1928 aa7.79□□□□□ -1.16
MDH1YKL085W PDR18P53756 1333 aa7.78□□□□□ -1.16
MDH1YKL085W PRO3P32263 286 aaKnown RBP7.78□□□□□ -1.16
MDH1YKL085W DBP7P36120 742 aaKnown RBP7.78□□□□□ -1.16
MDH1YKL085W DAK1P54838 584 aaKnown RBP7.78□□□□□ -1.16
MDH1YKL085W YMR321CQ04898 105 aa7.78□□□□□ -1.16
MDH1YKL085W DUS3Q06053 668 aaKnown RBP7.78□□□□□ -1.16
MDH1YKL085W CSC1Q06538 782 aa7.78□□□□□ -1.16
MDH1YKL085W ERP3Q12403 225 aa7.78□□□□□ -1.16
MDH1YKL085W ACE2P21192 770 aa7.77□□□□□ -1.17
MDH1YKL085W PBY1P38254 753 aa7.77□□□□□ -1.17
MDH1YKL085W POL32P47110 350 aa7.77□□□□□ -1.17
MDH1YKL085W SPH1Q06160 661 aa7.77□□□□□ -1.17
MDH1YKL085W TAH18Q12181 623 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms