RNA–Protein interactions for RNA: YKL014C

URB1, Transcript of Protein required for the normal accumulation of 25S and 5.8S rRNAs, yeastyeast

Gene URB1, Length 5,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URB1YKL014C DLD3P39976 496 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C LSM4P40070 187 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C LAM4P38800 1345 aa-0.28□□□□□ -2.45
URB1YKL014C AI3P03877 415 aa-0.28□□□□□ -2.45
URB1YKL014C UBP15P50101 1230 aa-0.28□□□□□ -2.45
URB1YKL014C SSL1Q04673 461 aaPredicted RBP-0.28□□□□□ -2.45
URB1YKL014C SEC3P33332 1336 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C PEP7P32609 515 aa-0.28□□□□□ -2.45
URB1YKL014C SKG6P32900 734 aaPredicted RBP-0.28□□□□□ -2.45
URB1YKL014C MRT4P33201 236 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C TOD6P34219 525 aa-0.28□□□□□ -2.45
URB1YKL014C SEF1P34228 1148 aa-0.28□□□□□ -2.45
URB1YKL014C PXL1P36166 706 aa-0.28□□□□□ -2.45
URB1YKL014C AHP1P38013 176 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C WSC4P38739 605 aa-0.28□□□□□ -2.45
URB1YKL014C RBG1P39729 369 aa-0.28□□□□□ -2.45
URB1YKL014C RPL34BP40525 121 aaKnown RBP-0.28□□□□□ -2.45
URB1YKL014C RPL34AP87262 121 aaPredicted RBP-0.28□□□□□ -2.45
URB1YKL014C YPR109WQ06104 294 aa-0.28□□□□□ -2.45
URB1YKL014C LST4P34239 828 aa-0.29□□□□□ -2.46
URB1YKL014C PGM2P37012 569 aaKnown RBP-0.29□□□□□ -2.46
URB1YKL014C MSE1P48525 536 aa-0.29□□□□□ -2.46
URB1YKL014C GIP3Q03016 1276 aa-0.29□□□□□ -2.46
URB1YKL014C APC11Q12157 165 aa-0.29□□□□□ -2.46
URB1YKL014C MAM1P40065 302 aa-0.29□□□□□ -2.46
URB1YKL014C DDI1P40087 428 aa-0.29□□□□□ -2.46
URB1YKL014C HLJ1P48353 224 aa-0.29□□□□□ -2.46
URB1YKL014C CRT10Q08226 957 aa-0.29□□□□□ -2.46
URB1YKL014C FLO9P39712 1322 aa-0.29□□□□□ -2.46
URB1YKL014C MSB1P21339 1137 aaKnown RBP-0.29□□□□□ -2.46
URB1YKL014C BDH2P39713 417 aa-0.29□□□□□ -2.46
URB1YKL014C YNL208WP40159 199 aaKnown RBP-0.29□□□□□ -2.46
URB1YKL014C SSM4P40318 1319 aa-0.29□□□□□ -2.46
URB1YKL014C PRP2P20095 876 aaPredicted RBP-0.29□□□□□ -2.46
URB1YKL014C PRI2P20457 528 aa-0.29□□□□□ -2.46
URB1YKL014C YJR120WP47157 116 aa-0.29□□□□□ -2.46
URB1YKL014C TOF2Q02208 771 aa-0.29□□□□□ -2.46
URB1YKL014C GAS3Q03655 524 aa-0.29□□□□□ -2.46
URB1YKL014C ITT1Q04638 464 aa-0.29□□□□□ -2.46
URB1YKL014C PUF3Q07807 879 aaKnown RBP RIP-Chip data-0.29□□□□□ -2.46 RIP-Chip
URB1YKL014C HAP4P14064 554 aa-0.29□□□□□ -2.46
URB1YKL014C PGM1P33401 570 aaKnown RBP-0.29□□□□□ -2.46
URB1YKL014C GEM1P39722 662 aa-0.29□□□□□ -2.46
URB1YKL014C ADR1P07248 1323 aa-0.3□□□□□ -2.46
URB1YKL014C STH1P32597 1359 aa-0.3□□□□□ -2.46
URB1YKL014C FUB1P25659 250 aa-0.3□□□□□ -2.46
URB1YKL014C AGP2P38090 596 aa-0.3□□□□□ -2.46
URB1YKL014C PUF4P25339 888 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46 RIP-Chip
URB1YKL014C SPI1P40092 148 aa-0.3□□□□□ -2.46
URB1YKL014C DIG2Q03373 323 aaKnown RBP-0.3□□□□□ -2.46
URB1YKL014C OPY2Q06810 360 aa-0.3□□□□□ -2.46
URB1YKL014C PUS9Q12069 462 aa-0.3□□□□□ -2.46
URB1YKL014C STB3Q12427 513 aa-0.3□□□□□ -2.46
URB1YKL014C YBL086CP38177 466 aa-0.3□□□□□ -2.46
URB1YKL014C MTC4P38335 694 aaKnown RBP-0.3□□□□□ -2.46
URB1YKL014C ECM16Q04217 1267 aaKnown RBP-0.3□□□□□ -2.46
URB1YKL014C ALR1Q08269 859 aa-0.3□□□□□ -2.46
URB1YKL014C ALA1P40825 983 aaKnown RBP-0.3□□□□□ -2.46
URB1YKL014C CDA2Q06703 312 aa-0.3□□□□□ -2.46
URB1YKL014C YOR389WQ08912 624 aa-0.3□□□□□ -2.46
URB1YKL014C CYT1P07143 309 aa-0.31□□□□□ -2.46
URB1YKL014C MRPL16P38064 232 aa-0.31□□□□□ -2.46
URB1YKL014C BIR1P47134 954 aa-0.31□□□□□ -2.46
URB1YKL014C KIN4Q01919 800 aa-0.31□□□□□ -2.46
URB1YKL014C ECM23Q02710 187 aa-0.31□□□□□ -2.46
URB1YKL014C RSC2Q06488 889 aa-0.31□□□□□ -2.46
URB1YKL014C RDR1Q08904 546 aa-0.31□□□□□ -2.46
URB1YKL014C ISF1P32488 338 aa-0.31□□□□□ -2.46
URB1YKL014C SPS18P32572 300 aa-0.31□□□□□ -2.46
URB1YKL014C SIP5P40210 489 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C DIG1Q03063 452 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C YOR352WQ08816 343 aa-0.31□□□□□ -2.46
URB1YKL014C RAD59Q12223 238 aa-0.31□□□□□ -2.46
URB1YKL014C RTC1Q08281 1341 aa-0.31□□□□□ -2.46
URB1YKL014C RAP1P11938 827 aa-0.31□□□□□ -2.46
URB1YKL014C MAK11P20484 414 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C RAD53P22216 821 aa-0.31□□□□□ -2.46
URB1YKL014C PCS60P38137 543 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
URB1YKL014C YJL045WP47052 634 aa-0.31□□□□□ -2.46
URB1YKL014C RIM8P53179 542 aa-0.31□□□□□ -2.46
URB1YKL014C ERV29P53337 310 aa-0.31□□□□□ -2.46
URB1YKL014C BOP3P53958 396 aa-0.31□□□□□ -2.46
URB1YKL014C ELP3Q02908 557 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C MYO5Q04439 1219 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C RPL4AP10664 362 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C TRM2P33753 639 aa-0.31□□□□□ -2.46
URB1YKL014C APE4P38821 490 aa-0.31□□□□□ -2.46
URB1YKL014C NAB3P38996 802 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
URB1YKL014C PTR3P43606 678 aa-0.31□□□□□ -2.46
URB1YKL014C RPL4BP49626 362 aaKnown RBP-0.31□□□□□ -2.46
URB1YKL014C SPT5P27692 1063 aaKnown RBP-0.32□□□□□ -2.46
URB1YKL014C GAC1P28006 793 aa-0.32□□□□□ -2.46
URB1YKL014C MKK2P32491 506 aa-0.32□□□□□ -2.46
URB1YKL014C WHI3P34761 661 aaKnown RBP-0.32□□□□□ -2.46
URB1YKL014C SDH8P38345 138 aa-0.32□□□□□ -2.46
URB1YKL014C MPT5P39016 859 aaKnown RBP RIP-Chip data-0.32□□□□□ -2.46not detected
URB1YKL014C YGR210CP42942 411 aa-0.32□□□□□ -2.46
URB1YKL014C GAT1P43574 510 aa-0.32□□□□□ -2.46
URB1YKL014C CKB1P43639 278 aa-0.32□□□□□ -2.46
URB1YKL014C PIB2P53191 635 aa-0.32□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms