RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	TY4A-H	Q6Q5P6	413 aa		3.59	□□□□□ -1.83
NUP82	YJL061W	UTP22	P53254	1237 aa	Predicted RBP	3.59	□□□□□ -1.84
NUP82	YJL061W	FAR11	P53917	953 aa		3.59	□□□□□ -1.84
NUP82	YJL061W	NOG1	Q02892	647 aa	Known RBP	3.59	□□□□□ -1.84
NUP82	YJL061W	YLL054C	Q12244	843 aa		3.59	□□□□□ -1.84
NUP82	YJL061W	MCX1	P38323	520 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP82	YJL061W	RRM3	P38766	723 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	POL5	P39985	1022 aa	Known RBP	3.58	□□□□□ -1.84
NUP82	YJL061W	GCV1	P48015	400 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	PEX13	P80667	386 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	ELG1	Q12050	791 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	PHM7	Q12252	991 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	MAE1	P36013	669 aa	Known RBP	3.58	□□□□□ -1.84
NUP82	YJL061W	PEX28	P38848	579 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	YFL066C	P43538	392 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	TDA6	Q06466	467 aa		3.58	□□□□□ -1.84
NUP82	YJL061W	TAF13	P11747	167 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	MSH3	P25336	1018 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	ARL1	P38116	183 aa	Known RBP	3.57	□□□□□ -1.84
NUP82	YJL061W	EXO5	P38289	585 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	MET10	P39692	1035 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	MEC3	Q02574	474 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	YMR074C	Q04773	145 aa		3.57	□□□□□ -1.84
NUP82	YJL061W	CLN2	P20438	545 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	SFA1	P32771	386 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	PET112	P33893	541 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	MNR2	P35724	969 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	PIC2	P40035	300 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	MTR4	P47047	1073 aa	Known RBP	3.56	□□□□□ -1.84
NUP82	YJL061W	SEC23	P15303	768 aa	Known RBP	3.56	□□□□□ -1.84
NUP82	YJL061W	VMA4	P22203	233 aa	Known RBP	3.56	□□□□□ -1.84
NUP82	YJL061W	MDJ1	P35191	511 aa		3.56	□□□□□ -1.84
NUP82	YJL061W	JIP5	Q06214	492 aa	Predicted RBP	3.56	□□□□□ -1.84
NUP82	YJL061W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-DR6	P0CX70	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-ER1	P0CX71	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-LR2	P0CX72	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-PL	P0CX73	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-JR1	P0CX74	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-LR3	P0CX75	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-ML2	P0CX76	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	ATG14	P38270	344 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	ICP55	P40051	511 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	MAD1	P40957	749 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	YGL140C	P53120	1219 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	BUD9	P53226	547 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	YMR187C	Q03236	431 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-GR1	Q12085	440 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	YPR053C	Q6Q5F3	151 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-OL	Q92392	440 aa	Known RBP	3.55	□□□□□ -1.84
NUP82	YJL061W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	RIP-Chip
NUP82	YJL061W	ERS1	P17261	260 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	REI1	P38344	393 aa	Predicted RBP	3.55	□□□□□ -1.84
NUP82	YJL061W	XKS1	P42826	600 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	YOR223W	Q12015	292 aa		3.55	□□□□□ -1.84
NUP82	YJL061W	TY1A-NL1	Q12391	440 aa	Known RBP	3.55	□□□□□ -1.84
NUP82	YJL061W	AI3	P03877	415 aa		3.54	□□□□□ -1.84
NUP82	YJL061W	RSC6	P25632	483 aa		3.54	□□□□□ -1.84
NUP82	YJL061W	NEM1	P38757	446 aa		3.54	□□□□□ -1.84
NUP82	YJL061W	KIP3	P53086	805 aa	Known RBP	3.54	□□□□□ -1.84
NUP82	YJL061W	MRL1	Q06815	381 aa		3.54	□□□□□ -1.84
NUP82	YJL061W	PUS1	Q12211	544 aa	Known RBP	3.54	□□□□□ -1.84
NUP82	YJL061W	SLS1	P42900	643 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	ENT3	P47160	408 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	UTP5	Q04177	643 aa	Known RBP	3.53	□□□□□ -1.84
NUP82	YJL061W	AVO1	Q08236	1176 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	RTT10	Q08924	1013 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	YDR215C	Q12240	137 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	RAD27	P26793	382 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	TAT1	P38085	619 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	RDH54	P38086	958 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	PRY1	P47032	299 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	GAS5	Q08193	484 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	PIN2	Q12057	282 aa		3.53	□□□□□ -1.84
NUP82	YJL061W	GCR1	P07261	785 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	ADD66	P36040	267 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	ARI1	P53111	347 aa	Known RBP	3.52	□□□□□ -1.85
NUP82	YJL061W	SIW14	P53965	281 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	VPS16	Q03308	798 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	RKM2	Q03942	479 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	DOT1	Q04089	582 aa	Known RBP	3.52	□□□□□ -1.85
NUP82	YJL061W	HDA2	Q06629	674 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	TMA46	Q12000	345 aa	Known RBP	3.52	□□□□□ -1.85
NUP82	YJL061W	CDC34	P14682	295 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	HSE1	P38753	452 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	YAR028W	P39548	234 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	NCE103	P53615	221 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	EST2	Q06163	884 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	LAP2	Q10740	671 aa		3.52	□□□□□ -1.85
NUP82	YJL061W	ALG6	Q12001	544 aa	Known RBP	3.52	□□□□□ -1.85
NUP82	YJL061W	YCK2	P23292	546 aa	Known RBP	3.51	□□□□□ -1.85
NUP82	YJL061W	SKN7	P38889	622 aa		3.51	□□□□□ -1.85
NUP82	YJL061W	CWC24	P53769	259 aa		3.51	□□□□□ -1.85
NUP82	YJL061W	REC8	Q12188	680 aa		3.51	□□□□□ -1.85
NUP82	YJL061W	DED1	P06634	604 aa	Known RBP	3.5	□□□□□ -1.85
NUP82	YJL061W	HEM13	P11353	328 aa	Known RBP	3.5	□□□□□ -1.85
NUP82	YJL061W	SLN1	P39928	1220 aa	Predicted RBP	3.5	□□□□□ -1.85
NUP82	YJL061W	SPO74	P45819	413 aa		3.5	□□□□□ -1.85
NUP82	YJL061W	GNP1	P48813	663 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms