RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	YNR040W	P53736	256 aa		4.98	□□□□□ -1.61
CFD1	YIL003W	DOS2	P54858	310 aa		4.98	□□□□□ -1.61
CFD1	YIL003W	GAS5	Q08193	484 aa		4.98	□□□□□ -1.61
CFD1	YIL003W	OXR1	Q08952	273 aa		4.98	□□□□□ -1.61
CFD1	YIL003W	SLP1	Q12232	587 aa		4.98	□□□□□ -1.61
CFD1	YIL003W	PAN1	P32521	1480 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	HXK1	P04806	485 aa	Known RBP	4.97	□□□□□ -1.61
CFD1	YIL003W	RAD2	P07276	1031 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	NMD2	P38798	1089 aa	Known RBP	4.97	□□□□□ -1.61
CFD1	YIL003W	RAD55	P38953	406 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	FAA3	P39002	694 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	IOC3	P43596	787 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	BSC2	Q05611	235 aa		4.97	□□□□□ -1.61
CFD1	YIL003W	TY2B-LR1	P0C2J3	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-F	P0CX63	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-GR2	P0CX64	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-C	P25384	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-DR2	Q03494	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY1B-DR1	Q03855	1755 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-OR1	Q12113	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-DR1	Q12472	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	TY2B-OR2	Q12501	1770 aa		4.96	□□□□□ -1.61
CFD1	YIL003W	RKR1	Q04781	1562 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	MSN1	P22148	382 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	PET112	P33893	541 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	NTA1	P40354	457 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	QDR2	P40474	542 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	RGD2	P43556	714 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	RNH70	P53331	553 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	YAF9	P53930	226 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	SSF2	Q12153	453 aa	Predicted RBP	4.96	□□□□□ -1.62
CFD1	YIL003W	TY1B-BR	Q12193	1756 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	TY1B-GR3	Q12316	1755 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	TY1B-OR	Q92393	1755 aa		4.96	□□□□□ -1.62
CFD1	YIL003W	ESC1	Q03661	1658 aa	Known RBP	4.96	□□□□□ -1.62
CFD1	YIL003W	DNF1	P32660	1571 aa		4.95	□□□□□ -1.62
CFD1	YIL003W	SRP40	P32583	406 aa	Predicted RBP	4.95	□□□□□ -1.62
CFD1	YIL003W	MNR2	P35724	969 aa		4.95	□□□□□ -1.62
CFD1	YIL003W	DYS1	P38791	387 aa		4.95	□□□□□ -1.62
CFD1	YIL003W	DAL4	Q04895	635 aa		4.95	□□□□□ -1.62
CFD1	YIL003W	INP54	Q08227	384 aa	Known RBP	4.95	□□□□□ -1.62
CFD1	YIL003W	WRS1	Q12109	432 aa	Known RBP	4.95	□□□□□ -1.62
CFD1	YIL003W	TIF6	Q12522	245 aa	Known RBP	4.95	□□□□□ -1.62
CFD1	YIL003W	TOP2	P06786	1428 aa	Known RBP	4.95	□□□□□ -1.62
CFD1	YIL003W	RPA190	P10964	1664 aa	Known RBP	4.94	□□□□□ -1.62
CFD1	YIL003W	IDI1	P15496	288 aa		4.94	□□□□□ -1.62
CFD1	YIL003W	COQ2	P32378	372 aa		4.94	□□□□□ -1.62
CFD1	YIL003W	YER156C	P40093	338 aa	Known RBP	4.94	□□□□□ -1.62
CFD1	YIL003W	PSY2	P40164	858 aa		4.94	□□□□□ -1.62
CFD1	YIL003W	CWC24	P53769	259 aa		4.94	□□□□□ -1.62
CFD1	YIL003W	MED7	Q08278	222 aa		4.94	□□□□□ -1.62
CFD1	YIL003W	MRP10	O75012	95 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	CIT2	P08679	460 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	YKL091C	P33324	310 aa	Known RBP	4.93	□□□□□ -1.62
CFD1	YIL003W	IRS4	P36115	615 aa	Known RBP	4.93	□□□□□ -1.62
CFD1	YIL003W	KAE1	P36132	386 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	FIR1	P40020	876 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	NSE3	Q05541	303 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	GEA2	P39993	1459 aa	Known RBP	4.93	□□□□□ -1.62
CFD1	YIL003W	BNI1	P41832	1953 aa		4.93	□□□□□ -1.62
CFD1	YIL003W	FLP1	P03870	423 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	RSC6	P25632	483 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	PRP40	P33203	583 aa	Known RBP	4.92	□□□□□ -1.62
CFD1	YIL003W	BSD2	P38356	321 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	YHL008C	P38750	627 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	YJL049W	P47048	450 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	YCS4	Q06156	1176 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	YLR122C	Q12312	125 aa		4.92	□□□□□ -1.62
CFD1	YIL003W	TY1B-H	O13535	1793 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-DR5	P0C2I2	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-DR6	P0C2I3	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-LR2	P0C2I5	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-PR2	P0C2J0	1756 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-JR1	P47098	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-ER1	Q03612	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-GR2	Q12269	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-OL	Q12273	1755 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY1B-PL	Q12414	1755 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	TY4B-P	A0A0B7P3V8	1104 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TRP3	P00937	484 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	PRE9	P23638	258 aa	Known RBP	4.91	□□□□□ -1.62
CFD1	YIL003W	PPG1	P32838	368 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	YKR073C	P36153	106 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	MRPS18	P42847	217 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	AVT1	P47082	602 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	ITC1	P53125	1264 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	FAR11	P53917	953 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	TY4A-H	Q6Q5P6	413 aa		4.91	□□□□□ -1.62
CFD1	YIL003W	MCM5	P29496	775 aa	Known RBP	4.9	□□□□□ -1.63
CFD1	YIL003W	UGA4	P32837	571 aa		4.9	□□□□□ -1.63
CFD1	YIL003W	ISW1	P38144	1129 aa		4.9	□□□□□ -1.63
CFD1	YIL003W	SAF1	P38352	637 aa		4.9	□□□□□ -1.63
CFD1	YIL003W	GDE1	Q02979	1223 aa		4.9	□□□□□ -1.63
CFD1	YIL003W	YOR296W	Q08748	1289 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms