RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YLR001CQ07895 862 aa2.64□□□□□ -1.99
TRA1YHR099W LAM6Q08001 693 aa2.64□□□□□ -1.99
TRA1YHR099W SAC7P17121 654 aa2.63□□□□□ -1.99
TRA1YHR099W GNT1Q12096 491 aa2.63□□□□□ -1.99
TRA1YHR099W ATP16Q12165 160 aa2.63□□□□□ -1.99
TRA1YHR099W SNF2P22082 1703 aa2.63□□□□□ -1.99
TRA1YHR099W STO1P34160 861 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W YML6P51998 286 aa2.63□□□□□ -1.99
TRA1YHR099W RDI1Q12434 202 aa2.63□□□□□ -1.99
TRA1YHR099W RPA190P10964 1664 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W SAC3P46674 1301 aa2.63□□□□□ -1.99
TRA1YHR099W ARG4P04076 463 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W YNG2P38806 282 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W YGR054WP53235 642 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W UTP22P53254 1237 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W TFC3P34111 1160 aa2.63□□□□□ -1.99
TRA1YHR099W MTW1P39731 289 aa2.63□□□□□ -1.99
TRA1YHR099W ALK1P43633 760 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W CHA4P43634 648 aa2.63□□□□□ -1.99
TRA1YHR099W CUS1Q02554 436 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W RTC5Q12108 567 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W YDL073WQ07454 984 aa2.63□□□□□ -1.99
TRA1YHR099W CFT2Q12102 859 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W NTO1Q12311 748 aa2.63□□□□□ -1.99
TRA1YHR099W RPT3P33298 428 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W LRG1P35688 1017 aa2.63□□□□□ -1.99
TRA1YHR099W AIM23P47015 356 aa2.63□□□□□ -1.99
TRA1YHR099W YNR068CP53754 272 aa2.63□□□□□ -1.99
TRA1YHR099W IST1P53843 298 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W CSM3Q04659 317 aa2.63□□□□□ -1.99
TRA1YHR099W USO1P25386 1790 aa2.63□□□□□ -1.99
TRA1YHR099W PKC1P24583 1151 aa2.63□□□□□ -1.99
TRA1YHR099W TAF5P38129 798 aa2.63□□□□□ -1.99
TRA1YHR099W SLN1P39928 1220 aaPredicted RBP2.63□□□□□ -1.99
TRA1YHR099W HXT17P53631 564 aa2.63□□□□□ -1.99
TRA1YHR099W SPO21Q12411 609 aa2.63□□□□□ -1.99
TRA1YHR099W BUD14P27637 709 aa2.63□□□□□ -1.99
TRA1YHR099W SLZ1P40167 298 aa2.63□□□□□ -1.99
TRA1YHR099W MFM1Q02783 413 aa2.63□□□□□ -1.99
TRA1YHR099W ARP9Q05123 467 aa2.63□□□□□ -1.99
TRA1YHR099W LCB5Q06147 687 aaKnown RBP2.63□□□□□ -1.99
TRA1YHR099W TY3B-GQ99315 1547 aa2.63□□□□□ -1.99
TRA1YHR099W PRP9P19736 530 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W PRE10P21242 288 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99 RIP-Chip
TRA1YHR099W DBP9Q06218 594 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W SEC10Q06245 871 aa2.62□□□□□ -1.99
TRA1YHR099W SAP190P36123 1033 aa2.62□□□□□ -1.99
TRA1YHR099W LIN1P38852 340 aaPredicted RBP2.62□□□□□ -1.99
TRA1YHR099W MRPL50P53724 139 aa2.62□□□□□ -1.99
TRA1YHR099W SRP54P20424 541 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W TAT2P38967 592 aa2.62□□□□□ -1.99
TRA1YHR099W STM1P39015 273 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W NKP2Q06162 153 aa2.62□□□□□ -1.99
TRA1YHR099W PSR2Q07949 397 aa2.62□□□□□ -1.99
TRA1YHR099W TY4B-PA0A0B7P3V8 1104 aa2.62□□□□□ -1.99
TRA1YHR099W HOM3P10869 527 aa2.62□□□□□ -1.99
TRA1YHR099W BUD2P33314 1104 aa2.62□□□□□ -1.99
TRA1YHR099W RRD1P40454 393 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W RBL2P48606 106 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W CMS1Q07897 291 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W SCC2Q04002 1493 aa2.62□□□□□ -1.99
TRA1YHR099W GEA2P39993 1459 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W SSB1P11484 613 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W SSF1P38789 453 aaPredicted RBP2.62□□□□□ -1.99
TRA1YHR099W BIG1P38813 335 aa2.62□□□□□ -1.99
TRA1YHR099W SSB2P40150 613 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W LAM5P43560 674 aa2.62□□□□□ -1.99
TRA1YHR099W TRE2Q08693 809 aa2.62□□□□□ -1.99
TRA1YHR099W VPS54Q12071 889 aa2.62□□□□□ -1.99
TRA1YHR099W PRP45P28004 379 aaPredicted RBP2.62□□□□□ -1.99
TRA1YHR099W YKR023WP36119 530 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W MNT2P53059 558 aa2.62□□□□□ -1.99
TRA1YHR099W MRS2Q01926 470 aa2.62□□□□□ -1.99
TRA1YHR099W YPD1Q07688 167 aa2.62□□□□□ -1.99
TRA1YHR099W SMC5Q08204 1093 aa2.62□□□□□ -1.99
TRA1YHR099W KRE2P27809 442 aa2.62□□□□□ -1.99
TRA1YHR099W MCM5P29496 775 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W YKL091CP33324 310 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W YIL001WP40560 513 aa2.62□□□□□ -1.99
TRA1YHR099W CPR6P53691 371 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W PDS5Q04264 1277 aa2.62□□□□□ -1.99
TRA1YHR099W MSB4Q12317 492 aa2.62□□□□□ -1.99
TRA1YHR099W MLS1P30952 554 aa2.62□□□□□ -1.99
TRA1YHR099W PSE1P32337 1089 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W NFU1P32860 256 aa2.62□□□□□ -1.99
TRA1YHR099W DRE2P36152 348 aa2.62□□□□□ -1.99
TRA1YHR099W KAP104P38217 918 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W SPC97P38863 823 aa2.62□□□□□ -1.99
TRA1YHR099W RTR1P40084 226 aaPredicted RBP2.62□□□□□ -1.99
TRA1YHR099W ELC1Q03071 99 aa2.62□□□□□ -1.99
TRA1YHR099W STE20Q03497 939 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W VMS1Q04311 632 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W GGA1Q06336 557 aa2.62□□□□□ -1.99
TRA1YHR099W CRT10Q08226 957 aa2.62□□□□□ -1.99
TRA1YHR099W RPN8Q08723 338 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W ESC1Q03661 1658 aaKnown RBP2.62□□□□□ -1.99
TRA1YHR099W POL30P15873 258 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W SCL1P21243 252 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W MIP6P38760 659 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W EPL1P43572 832 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 142.1 ms