RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W TAF13P11747 167 aa5.69□□□□□ -1.5
PRP18YGR006W PEX28P38848 579 aa5.69□□□□□ -1.5
PRP18YGR006W PIC2P40035 300 aa5.69□□□□□ -1.5
PRP18YGR006W YNR014WP53719 212 aa5.69□□□□□ -1.5
PRP18YGR006W PEX13P80667 386 aa5.69□□□□□ -1.5
PRP18YGR006W PIN2Q12057 282 aa5.69□□□□□ -1.5
PRP18YGR006W SAC7P17121 654 aa5.68□□□□□ -1.5
PRP18YGR006W MSH3P25336 1018 aa5.68□□□□□ -1.5
PRP18YGR006W UTP22P53254 1237 aaPredicted RBP5.68□□□□□ -1.5
PRP18YGR006W VPS16Q03308 798 aa5.68□□□□□ -1.5
PRP18YGR006W YIG1Q08956 461 aa5.68□□□□□ -1.5
PRP18YGR006W PAN5P38787 379 aa5.67□□□□□ -1.5
PRP18YGR006W TED1P40533 473 aa5.67□□□□□ -1.5
PRP18YGR006W YFL066CP43538 392 aa5.67□□□□□ -1.5
PRP18YGR006W YGL140CP53120 1219 aa5.67□□□□□ -1.5
PRP18YGR006W SEC23P15303 768 aaKnown RBP5.66□□□□□ -1.5
PRP18YGR006W VMA4P22203 233 aaKnown RBP5.66□□□□□ -1.5
PRP18YGR006W ARL1P38116 183 aaKnown RBP5.66□□□□□ -1.5
PRP18YGR006W EXO5P38289 585 aa5.66□□□□□ -1.5
PRP18YGR006W GCV1P48015 400 aa5.66□□□□□ -1.5
PRP18YGR006W RTT10Q08924 1013 aa5.66□□□□□ -1.5
PRP18YGR006W YLL054CQ12244 843 aa5.66□□□□□ -1.5
PRP18YGR006W TY4B-PA0A0B7P3V8 1104 aa5.65□□□□□ -1.5
PRP18YGR006W BOI2P39969 1040 aa5.65□□□□□ -1.5
PRP18YGR006W POL5P39985 1022 aaKnown RBP5.65□□□□□ -1.5
PRP18YGR006W ICP55P40051 511 aa5.65□□□□□ -1.5
PRP18YGR006W XKS1P42826 600 aa5.65□□□□□ -1.5
PRP18YGR006W FAR11P53917 953 aa5.65□□□□□ -1.5
PRP18YGR006W MAG2Q06436 670 aaKnown RBP5.65□□□□□ -1.5
PRP18YGR006W TDA6Q06466 467 aa5.65□□□□□ -1.5
PRP18YGR006W PHM7Q12252 991 aa5.65□□□□□ -1.5
PRP18YGR006W TY4A-HQ6Q5P6 413 aa5.65□□□□□ -1.5
PRP18YGR006W CDC34P14682 295 aa5.64□□□□□ -1.51
PRP18YGR006W RAD27P26793 382 aa5.64□□□□□ -1.51
PRP18YGR006W MTR4P47047 1073 aaKnown RBP5.64□□□□□ -1.51
PRP18YGR006W ENT3P47160 408 aa5.64□□□□□ -1.51
PRP18YGR006W DSE4P53753 1117 aa5.64□□□□□ -1.51
PRP18YGR006W CWC24P53769 259 aa5.64□□□□□ -1.51
PRP18YGR006W MEC3Q02574 474 aa5.64□□□□□ -1.51
PRP18YGR006W MRL1Q06815 381 aa5.64□□□□□ -1.51
PRP18YGR006W TMA46Q12000 345 aaKnown RBP5.64□□□□□ -1.51
PRP18YGR006W ELG1Q12050 791 aa5.64□□□□□ -1.51
PRP18YGR006W PUS1Q12211 544 aaKnown RBP5.64□□□□□ -1.51
PRP18YGR006W GCR1P07261 785 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-LR4P0C2I8 440 aaKnown RBP5.63□□□□□ -1.51
PRP18YGR006W TY1A-DR6P0CX70 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-ER1P0CX71 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-LR2P0CX72 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-PLP0CX73 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-JR1P0CX74 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-LR3P0CX75 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-ML2P0CX76 440 aa5.63□□□□□ -1.51
PRP18YGR006W MAE1P36013 669 aaKnown RBP5.63□□□□□ -1.51
PRP18YGR006W RDH54P38086 958 aa5.63□□□□□ -1.51
PRP18YGR006W ATG14P38270 344 aa5.63□□□□□ -1.51
PRP18YGR006W VAC8P39968 578 aa5.63□□□□□ -1.51
PRP18YGR006W ALD6P54115 500 aaKnown RBP5.63□□□□□ -1.51
PRP18YGR006W TY1A-GR1Q12085 440 aa5.63□□□□□ -1.51
PRP18YGR006W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.63□□□□□ -1.51
PRP18YGR006W TY1A-OLQ92392 440 aaKnown RBP5.63□□□□□ -1.51
PRP18YGR006W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
PRP18YGR006W YMR074CQ04773 145 aa5.62□□□□□ -1.51
PRP18YGR006W REI1P38344 393 aaPredicted RBP5.61□□□□□ -1.51
PRP18YGR006W NNF1P47149 201 aa5.61□□□□□ -1.51
PRP18YGR006W SIW14P53965 281 aa5.61□□□□□ -1.51
PRP18YGR006W UTP5Q04177 643 aaKnown RBP5.61□□□□□ -1.51
PRP18YGR006W HDA2Q06629 674 aa5.61□□□□□ -1.51
PRP18YGR006W YPR053CQ6Q5F3 151 aa5.61□□□□□ -1.51
PRP18YGR006W HEM13P11353 328 aaKnown RBP5.6□□□□□ -1.51
PRP18YGR006W DUT1P33317 147 aa5.6□□□□□ -1.51
PRP18YGR006W ADD66P36040 267 aa5.6□□□□□ -1.51
PRP18YGR006W NEM1P38757 446 aa5.6□□□□□ -1.51
PRP18YGR006W RRM3P38766 723 aa5.6□□□□□ -1.51
PRP18YGR006W SLS1P42900 643 aa5.6□□□□□ -1.51
PRP18YGR006W GNP1P48813 663 aa5.6□□□□□ -1.51
PRP18YGR006W GDE1Q02979 1223 aa5.6□□□□□ -1.51
PRP18YGR006W RKM2Q03942 479 aa5.6□□□□□ -1.51
PRP18YGR006W MCX1P38323 520 aaPredicted RBP5.59□□□□□ -1.51
PRP18YGR006W KRI1P42846 591 aaKnown RBP5.59□□□□□ -1.51
PRP18YGR006W YGR053CP53234 283 aa5.59□□□□□ -1.51
PRP18YGR006W EST2Q06163 884 aa5.59□□□□□ -1.51
PRP18YGR006W YOR223WQ12015 292 aa5.59□□□□□ -1.51
PRP18YGR006W ERS1P17261 260 aa5.58□□□□□ -1.52
PRP18YGR006W SFA1P32771 386 aa5.58□□□□□ -1.52
PRP18YGR006W FAA4P47912 694 aaKnown RBP5.58□□□□□ -1.52
PRP18YGR006W YMR187CQ03236 431 aa5.58□□□□□ -1.52
PRP18YGR006W AVO1Q08236 1176 aa5.58□□□□□ -1.52
PRP18YGR006W WRS1Q12109 432 aaKnown RBP5.58□□□□□ -1.52
PRP18YGR006W HSE1P38753 452 aa5.57□□□□□ -1.52
PRP18YGR006W LAP2Q10740 671 aa5.57□□□□□ -1.52
PRP18YGR006W REC8Q12188 680 aa5.57□□□□□ -1.52
PRP18YGR006W YAR028WP39548 234 aa5.56□□□□□ -1.52
PRP18YGR006W HXT13P39924 564 aa5.56□□□□□ -1.52
PRP18YGR006W KIP3P53086 805 aaKnown RBP5.56□□□□□ -1.52
PRP18YGR006W HXT17P53631 564 aa5.56□□□□□ -1.52
PRP18YGR006W HXT15P54854 567 aa5.56□□□□□ -1.52
PRP18YGR006W ROD1Q02805 837 aa5.56□□□□□ -1.52
PRP18YGR006W MTC5Q03897 1148 aa5.56□□□□□ -1.52
PRP18YGR006W SSF2Q12153 453 aaPredicted RBP5.56□□□□□ -1.52
PRP18YGR006W YDR215CQ12240 137 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms