RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC4	YGR002C	RPS26B	P39939	119 aa	Known RBP	4.65	□□□□□ -1.66
SWC4	YGR002C	POL5	P39985	1022 aa	Known RBP	4.65	□□□□□ -1.66
SWC4	YGR002C	PMT7	Q06644	662 aa		4.65	□□□□□ -1.66
SWC4	YGR002C	TY1A-NL1	Q12391	440 aa	Known RBP	4.65	□□□□□ -1.66
SWC4	YGR002C	HVG1	P0CE11	249 aa		4.64	□□□□□ -1.67
SWC4	YGR002C	COQ2	P32378	372 aa		4.64	□□□□□ -1.67
SWC4	YGR002C	SNU71	P53207	620 aa	Known RBP	4.64	□□□□□ -1.67
SWC4	YGR002C	FAR11	P53917	953 aa		4.64	□□□□□ -1.67
SWC4	YGR002C	KAR2	P16474	682 aa	Known RBP	4.63	□□□□□ -1.67
SWC4	YGR002C	ERS1	P17261	260 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	RVS167	P39743	482 aa	Known RBP	4.63	□□□□□ -1.67
SWC4	YGR002C	YGR122W	P53272	402 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	YAF9	P53930	226 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	ULP1	Q02724	621 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	HXK1	P04806	485 aa	Known RBP	4.63	□□□□□ -1.67
SWC4	YGR002C	PEP7	P32609	515 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	AKR1	P39010	764 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	SAP155	P43612	1002 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	RSM26	P47141	266 aa		4.63	□□□□□ -1.67
SWC4	YGR002C	KIP3	P53086	805 aa	Known RBP	4.63	□□□□□ -1.67
SWC4	YGR002C	SQT1	P35184	431 aa		4.62	□□□□□ -1.67
SWC4	YGR002C	HTS1	P07263	546 aa	Known RBP	4.61	□□□□□ -1.67
SWC4	YGR002C	RAD2	P07276	1031 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	CYC8	P14922	966 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	NAM7	P30771	971 aa	Known RBP	4.61	□□□□□ -1.67
SWC4	YGR002C	PEX13	P80667	386 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	REC8	Q12188	680 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	YLL054C	Q12244	843 aa		4.61	□□□□□ -1.67
SWC4	YGR002C	PRP5	P21372	849 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC4	YGR002C	MRPS18	P42847	217 aa		4.6	□□□□□ -1.67
SWC4	YGR002C	ESF1	Q06344	628 aa	Known RBP	4.6	□□□□□ -1.67
SWC4	YGR002C	YIG1	Q08956	461 aa		4.6	□□□□□ -1.67
SWC4	YGR002C	PRE9	P23638	258 aa	Known RBP	4.59	□□□□□ -1.67
SWC4	YGR002C	YKL077W	P36081	392 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	KAE1	P36132	386 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	SHU2	P38957	223 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	GCV1	P48015	400 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	UTP22	P53254	1237 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC4	YGR002C	NCE103	P53615	221 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	ADI1	Q03677	179 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	YOR223W	Q12015	292 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	MCD1	Q12158	566 aa		4.59	□□□□□ -1.67
SWC4	YGR002C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-DR6	P0CX70	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-ER1	P0CX71	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-LR2	P0CX72	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-PL	P0CX73	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-JR1	P0CX74	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-LR3	P0CX75	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-ML2	P0CX76	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	CHS2	P14180	963 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	REI1	P38344	393 aa	Predicted RBP	4.58	□□□□□ -1.68
SWC4	YGR002C	SAF1	P38352	637 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	PEX28	P38848	579 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-GR1	Q12085	440 aa		4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.58	□□□□□ -1.68
SWC4	YGR002C	TY1A-OL	Q92392	440 aa	Known RBP	4.58	□□□□□ -1.68
SWC4	YGR002C	MSH3	P25336	1018 aa		4.57	□□□□□ -1.68
SWC4	YGR002C	PGM1	P33401	570 aa	Known RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	PAM1	P37304	830 aa	Known RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	PIC2	P40035	300 aa		4.57	□□□□□ -1.68
SWC4	YGR002C	ALO1	P54783	526 aa	Known RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	MEC3	Q02574	474 aa		4.57	□□□□□ -1.68
SWC4	YGR002C	DOT1	Q04089	582 aa	Known RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	JIP5	Q06214	492 aa	Predicted RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SWC4	YGR002C	ALG6	Q12001	544 aa	Known RBP	4.57	□□□□□ -1.68
SWC4	YGR002C	YLR122C	Q12312	125 aa		4.57	□□□□□ -1.68
SWC4	YGR002C	GPT2	P36148	743 aa		4.56	□□□□□ -1.68
SWC4	YGR002C	EXO5	P38289	585 aa		4.56	□□□□□ -1.68
SWC4	YGR002C	NOP7	P53261	605 aa	Known RBP	4.56	□□□□□ -1.68
SWC4	YGR002C	GIC2	Q06648	383 aa		4.56	□□□□□ -1.68
SWC4	YGR002C	MAC1	P35192	417 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	XKS1	P42826	600 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	YGR130C	P53278	816 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	NOG1	Q02892	647 aa	Known RBP	4.55	□□□□□ -1.68
SWC4	YGR002C	RMD1	Q03441	430 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	AVO1	Q08236	1176 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	PET112	P33893	541 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	ATG14	P38270	344 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	NEM1	P38757	446 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	SLS1	P42900	643 aa		4.55	□□□□□ -1.68
SWC4	YGR002C	OMA1	P36163	345 aa		4.54	□□□□□ -1.68
SWC4	YGR002C	MTR4	P47047	1073 aa	Known RBP	4.54	□□□□□ -1.68
SWC4	YGR002C	YGL140C	P53120	1219 aa		4.54	□□□□□ -1.68
SWC4	YGR002C	ELA1	P53861	379 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC4	YGR002C	SVF1	Q05515	481 aa		4.54	□□□□□ -1.68
SWC4	YGR002C	MRL1	Q06815	381 aa		4.54	□□□□□ -1.68
SWC4	YGR002C	MED7	Q08278	222 aa		4.54	□□□□□ -1.68
SWC4	YGR002C	SEC23	P15303	768 aa	Known RBP	4.53	□□□□□ -1.68
SWC4	YGR002C	MET10	P39692	1035 aa		4.53	□□□□□ -1.68
SWC4	YGR002C	MAD1	P40957	749 aa		4.53	□□□□□ -1.68
SWC4	YGR002C	CYC7	P00045	113 aa		4.52	□□□□□ -1.69
SWC4	YGR002C	TRP3	P00937	484 aa		4.52	□□□□□ -1.69
SWC4	YGR002C	DED1	P06634	604 aa	Known RBP	4.52	□□□□□ -1.69
SWC4	YGR002C	HEM13	P11353	328 aa	Known RBP	4.52	□□□□□ -1.69
SWC4	YGR002C	MSB1	P21339	1137 aa	Known RBP	4.52	□□□□□ -1.69
SWC4	YGR002C	MMM1	P41800	426 aa		4.52	□□□□□ -1.69
SWC4	YGR002C	SPO74	P45819	413 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms