RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W EAR1Q03212 550 aa3.93□□□□□ -1.78
YCK3YER123W PTC7P38797 343 aa3.93□□□□□ -1.78
YCK3YER123W CLU1Q03690 1277 aaKnown RBP3.93□□□□□ -1.78
YCK3YER123W YPL277CQ08989 487 aa3.93□□□□□ -1.78
YCK3YER123W KTR2P33550 425 aa3.92□□□□□ -1.78
YCK3YER123W TTI1P36097 1038 aa3.92□□□□□ -1.78
YCK3YER123W APC11Q12157 165 aa3.92□□□□□ -1.78
YCK3YER123W RPS13P05756 151 aaKnown RBP3.91□□□□□ -1.78
YCK3YER123W SMC1P32908 1225 aa3.91□□□□□ -1.78
YCK3YER123W SHM2P37291 469 aaKnown RBP3.91□□□□□ -1.78
YCK3YER123W MEC3Q02574 474 aa3.91□□□□□ -1.78
YCK3YER123W YLR358CO13565 187 aa3.9□□□□□ -1.78
YCK3YER123W ETP1P38748 585 aaKnown RBP3.9□□□□□ -1.78
YCK3YER123W GTS1P40956 396 aa3.89□□□□□ -1.79
YCK3YER123W HTS1P07263 546 aaKnown RBP3.89□□□□□ -1.79
YCK3YER123W CTS1P29029 562 aa3.89□□□□□ -1.79
YCK3YER123W RRN6P32786 894 aa3.89□□□□□ -1.79
YCK3YER123W SMY2P32909 740 aaKnown RBP3.89□□□□□ -1.79
YCK3YER123W REI1P38344 393 aaPredicted RBP3.89□□□□□ -1.79
YCK3YER123W ALG6Q12001 544 aaKnown RBP3.89□□□□□ -1.79
YCK3YER123W SNO2P53823 222 aa3.88□□□□□ -1.79
YCK3YER123W NNK1P36003 928 aa3.87□□□□□ -1.79
YCK3YER123W PRE10P21242 288 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YCK3YER123W FOL2P51601 243 aaKnown RBP3.86□□□□□ -1.79
YCK3YER123W UTP22P53254 1237 aaPredicted RBP3.86□□□□□ -1.79
YCK3YER123W RQC2Q12532 1038 aaKnown RBP3.86□□□□□ -1.79
YCK3YER123W RPB10P22139 70 aa3.85□□□□□ -1.79
YCK3YER123W NPR1P22211 790 aa3.85□□□□□ -1.79
YCK3YER123W CTR9P89105 1077 aa3.85□□□□□ -1.79
YCK3YER123W CWC15Q03772 175 aaKnown RBP3.85□□□□□ -1.79
YCK3YER123W RIM11P38615 370 aa3.84□□□□□ -1.8
YCK3YER123W YGR045CP53229 120 aa3.84□□□□□ -1.8
YCK3YER123W ELA1P53861 379 aaPredicted RBP3.84□□□□□ -1.8
YCK3YER123W CMR1Q12510 522 aaKnown RBP3.84□□□□□ -1.8
YCK3YER123W PRP5P21372 849 aaPredicted RBP3.83□□□□□ -1.8
YCK3YER123W PUP1P25043 261 aa3.83□□□□□ -1.8
YCK3YER123W MPT5P39016 859 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
YCK3YER123W PNP1Q05788 311 aa3.83□□□□□ -1.8
YCK3YER123W AVO1Q08236 1176 aa3.83□□□□□ -1.8
YCK3YER123W YML122CQ03207 126 aa3.82□□□□□ -1.8
YCK3YER123W PUS7Q08647 676 aaKnown RBP3.82□□□□□ -1.8
YCK3YER123W LSO1Q3E827 93 aa3.82□□□□□ -1.8
YCK3YER123W ECM2P38241 364 aaKnown RBP3.81□□□□□ -1.8
YCK3YER123W TAT2P38967 592 aa3.81□□□□□ -1.8
YCK3YER123W PUS9Q12069 462 aa3.81□□□□□ -1.8
YCK3YER123W ARL1P38116 183 aaKnown RBP3.8□□□□□ -1.8
YCK3YER123W TPP1Q03796 238 aa3.8□□□□□ -1.8
YCK3YER123W COBP00163 385 aa3.8□□□□□ -1.8
YCK3YER123W TRM2P33753 639 aa3.8□□□□□ -1.8
YCK3YER123W CPS1P27614 576 aa3.79□□□□□ -1.8
YCK3YER123W YHL012WP38709 493 aa3.78□□□□□ -1.8
YCK3YER123W SAM35P14693 329 aa3.77□□□□□ -1.81
YCK3YER123W MDL2P33311 773 aa3.77□□□□□ -1.81
YCK3YER123W MSE1P48525 536 aa3.77□□□□□ -1.81
YCK3YER123W YDR132CQ03900 495 aa3.77□□□□□ -1.81
YCK3YER123W YOR352WQ08816 343 aa3.77□□□□□ -1.81
YCK3YER123W DUR3P33413 735 aa3.76□□□□□ -1.81
YCK3YER123W SPT20P50875 604 aa3.76□□□□□ -1.81
YCK3YER123W ENV11P53246 860 aa3.76□□□□□ -1.81
YCK3YER123W SLI1P53304 468 aa3.76□□□□□ -1.81
YCK3YER123W FUR4P05316 633 aaKnown RBP3.75□□□□□ -1.81
YCK3YER123W AIM26P32858 118 aa3.75□□□□□ -1.81
YCK3YER123W RSC4Q02206 625 aa3.74□□□□□ -1.81
YCK3YER123W TY1A-LR4P0C2I8 440 aaKnown RBP3.73□□□□□ -1.81
YCK3YER123W TY1A-DR6P0CX70 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-ER1P0CX71 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-LR2P0CX72 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-PLP0CX73 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-JR1P0CX74 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-LR3P0CX75 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-ML2P0CX76 440 aa3.73□□□□□ -1.81
YCK3YER123W SRO9P25567 434 aaKnown RBP3.73□□□□□ -1.81
YCK3YER123W SAP155P43612 1002 aa3.73□□□□□ -1.81
YCK3YER123W GCN5Q03330 439 aa3.73□□□□□ -1.81
YCK3YER123W SGD1Q06132 899 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-GR1Q12085 440 aa3.73□□□□□ -1.81
YCK3YER123W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.73□□□□□ -1.81
YCK3YER123W TY1A-OLQ92392 440 aaKnown RBP3.73□□□□□ -1.81
YCK3YER123W LAM1P38851 1228 aa3.72□□□□□ -1.81
YCK3YER123W MEF2P39677 819 aa3.72□□□□□ -1.81
YCK3YER123W YLR257WQ06146 321 aaKnown RBP3.72□□□□□ -1.81
YCK3YER123W URN1Q06525 465 aaKnown RBP3.72□□□□□ -1.81
YCK3YER123W PMT7Q06644 662 aa3.72□□□□□ -1.81
YCK3YER123W RET1P22276 1149 aaKnown RBP3.72□□□□□ -1.81
YCK3YER123W HRK1Q08732 759 aaKnown RBP3.72□□□□□ -1.81
YCK3YER123W YKL077WP36081 392 aa3.71□□□□□ -1.82
YCK3YER123W YAR028WP39548 234 aa3.71□□□□□ -1.82
YCK3YER123W YAF9P53930 226 aa3.71□□□□□ -1.82
YCK3YER123W CTF4Q01454 927 aa3.71□□□□□ -1.82
YCK3YER123W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
YCK3YER123W SPS1P08458 490 aa3.7□□□□□ -1.82
YCK3YER123W NMD3P38861 518 aaKnown RBP3.7□□□□□ -1.82
YCK3YER123W SUN4P53616 420 aa3.7□□□□□ -1.82
YCK3YER123W UFD2P54860 961 aa3.7□□□□□ -1.82
YCK3YER123W YML083CQ04526 418 aa3.7□□□□□ -1.82
YCK3YER123W RAD53P22216 821 aa3.69□□□□□ -1.82
YCK3YER123W PUF4P25339 888 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
YCK3YER123W HCM1P25364 564 aa3.69□□□□□ -1.82
YCK3YER123W HSE1P38753 452 aa3.69□□□□□ -1.82
YCK3YER123W DOM34P33309 386 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms