RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B PEP3P27801 918 aa16.5■□□□□ 0.23
YER088W-BYER088W-B PES4P39684 611 aa16.5■□□□□ 0.23
YER088W-BYER088W-B RPT6Q01939 405 aaKnown RBP16.5■□□□□ 0.23
YER088W-BYER088W-B VPS30Q02948 557 aa16.5■□□□□ 0.23
YER088W-BYER088W-B SRS2P12954 1174 aa16.49■□□□□ 0.23
YER088W-BYER088W-B TY3A-GQ12173 290 aa16.49■□□□□ 0.23
YER088W-BYER088W-B TY3A-IQ99219 290 aa16.49■□□□□ 0.23
YER088W-BYER088W-B MAK31P23059 88 aa16.48■□□□□ 0.23
YER088W-BYER088W-B RPL8BP29453 256 aaKnown RBP16.48■□□□□ 0.23
YER088W-BYER088W-B MYO5Q04439 1219 aaKnown RBP16.48■□□□□ 0.23
YER088W-BYER088W-B TFC6Q06339 672 aa16.48■□□□□ 0.23
YER088W-BYER088W-B ESF1Q06344 628 aaKnown RBP16.48■□□□□ 0.23
YER088W-BYER088W-B NUC1P08466 329 aa16.47■□□□□ 0.23
YER088W-BYER088W-B VMA2P16140 517 aaKnown RBP16.47■□□□□ 0.23
YER088W-BYER088W-B DIT2P21595 489 aa16.47■□□□□ 0.23
YER088W-BYER088W-B CSM2P40465 213 aa16.47■□□□□ 0.23
YER088W-BYER088W-B ATG1P53104 897 aa16.47■□□□□ 0.23
YER088W-BYER088W-B EST2Q06163 884 aa16.47■□□□□ 0.23
YER088W-BYER088W-B RAD18P10862 487 aa16.45■□□□□ 0.22
YER088W-BYER088W-B VPS45P38932 577 aa16.45■□□□□ 0.22
YER088W-BYER088W-B SDH2P21801 266 aa16.44■□□□□ 0.22
YER088W-BYER088W-B PKC1P24583 1151 aa16.44■□□□□ 0.22
YER088W-BYER088W-B EUG1P32474 517 aa16.44■□□□□ 0.22
YER088W-BYER088W-B GPB2P39717 880 aa16.43■□□□□ 0.22
YER088W-BYER088W-B AIM9P40053 627 aaKnown RBP16.43■□□□□ 0.22
YER088W-BYER088W-B ALD6P54115 500 aaKnown RBP16.43■□□□□ 0.22
YER088W-BYER088W-B CLF1Q12309 687 aaPredicted RBP16.43■□□□□ 0.22
YER088W-BYER088W-B RPC31P17890 251 aa16.42■□□□□ 0.22
YER088W-BYER088W-B SRP54P20424 541 aaKnown RBP16.42■□□□□ 0.22
YER088W-BYER088W-B PHO88P38264 188 aaPredicted RBP16.42■□□□□ 0.22
YER088W-BYER088W-B SPO22P40511 975 aa16.42■□□□□ 0.22
YER088W-BYER088W-B KRI1P42846 591 aaKnown RBP16.42■□□□□ 0.22
YER088W-BYER088W-B ALG2P43636 503 aa16.41■□□□□ 0.22
YER088W-BYER088W-B SUE1Q06524 206 aa16.41■□□□□ 0.22
YER088W-BYER088W-B UTP4Q06679 776 aaKnown RBP16.41■□□□□ 0.22
YER088W-BYER088W-B TRL1P09880 827 aaKnown RBP16.4■□□□□ 0.22
YER088W-BYER088W-B UTR4P32626 227 aa16.4■□□□□ 0.22
YER088W-BYER088W-B PSF2P40359 213 aa16.4■□□□□ 0.22
YER088W-BYER088W-B ECM23Q02710 187 aa16.4■□□□□ 0.22
YER088W-BYER088W-B YOR111WQ99210 232 aa16.4■□□□□ 0.22
YER088W-BYER088W-B SAM1P10659 382 aaKnown RBP16.39■□□□□ 0.21
YER088W-BYER088W-B YKR018CP36114 725 aa16.39■□□□□ 0.21
YER088W-BYER088W-B YAF9P53930 226 aa16.39■□□□□ 0.21
YER088W-BYER088W-B TMA64Q04600 565 aaKnown RBP16.39■□□□□ 0.21
YER088W-BYER088W-B TGL1P34163 548 aa16.38■□□□□ 0.21
YER088W-BYER088W-B VID28P40547 921 aa16.38■□□□□ 0.21
YER088W-BYER088W-B MDM1Q01846 1127 aa16.38■□□□□ 0.21
YER088W-BYER088W-B ULP1Q02724 621 aa16.37■□□□□ 0.21
YER088W-BYER088W-B DUS4Q06063 367 aa16.37■□□□□ 0.21
YER088W-BYER088W-B CSC1Q06538 782 aa16.37■□□□□ 0.21
YER088W-BYER088W-B PAM1P37304 830 aaKnown RBP16.36■□□□□ 0.21
YER088W-BYER088W-B MAL31P38156 614 aa16.36■□□□□ 0.21
YER088W-BYER088W-B CDC19P00549 500 aaKnown RBP16.35■□□□□ 0.21
YER088W-BYER088W-B AKR1P39010 764 aa16.35■□□□□ 0.21
YER088W-BYER088W-B PIB1Q06651 286 aa16.35■□□□□ 0.21
YER088W-BYER088W-B DSE3Q08729 430 aa16.35■□□□□ 0.21
YER088W-BYER088W-B RNR3P21672 869 aaKnown RBP16.34■□□□□ 0.21
YER088W-BYER088W-B FBP26P32604 452 aa16.34■□□□□ 0.21
YER088W-BYER088W-B SIS2P36024 562 aa16.34■□□□□ 0.21
YER088W-BYER088W-B LSB1P53281 241 aa16.34■□□□□ 0.21
YER088W-BYER088W-B SPH1Q06160 661 aa16.34■□□□□ 0.21
YER088W-BYER088W-B SHP1P34223 423 aa16.33■□□□□ 0.2
YER088W-BYER088W-B NDT80P38830 627 aa16.33■□□□□ 0.2
YER088W-BYER088W-B MXR1P40029 184 aa16.33■□□□□ 0.2
YER088W-BYER088W-B YGR125WP53273 1036 aa16.33■□□□□ 0.2
YER088W-BYER088W-B PRE10P21242 288 aaKnown RBP RIP-Chip data16.32■□□□□ 0.2not detected
YER088W-BYER088W-B PAH1P32567 862 aa16.32■□□□□ 0.2
YER088W-BYER088W-B SRP40P32583 406 aaPredicted RBP16.32■□□□□ 0.2
YER088W-BYER088W-B ARP5P53946 755 aa16.32■□□□□ 0.2
YER088W-BYER088W-B BUL2Q03758 920 aaKnown RBP16.32■□□□□ 0.2
YER088W-BYER088W-B ISW2Q08773 1120 aa16.32■□□□□ 0.2
YER088W-BYER088W-B TOM71P38825 639 aaKnown RBP16.31■□□□□ 0.2
YER088W-BYER088W-B FMS1P50264 508 aa16.31■□□□□ 0.2
YER088W-BYER088W-B DUS3Q06053 668 aaKnown RBP16.31■□□□□ 0.2
YER088W-BYER088W-B MET7Q08645 548 aa16.31■□□□□ 0.2
YER088W-BYER088W-B ICL2Q12031 575 aa16.3■□□□□ 0.2
YER088W-BYER088W-B PHR1P05066 565 aaKnown RBP RIP-Chip data16.29■□□□□ 0.2not detected
YER088W-BYER088W-B SEC20P28791 383 aa16.29■□□□□ 0.2
YER088W-BYER088W-B RGT1P32862 1170 aa16.29■□□□□ 0.2
YER088W-BYER088W-B EPL1P43572 832 aa16.29■□□□□ 0.2
YER088W-BYER088W-B SLD5Q03406 294 aa16.29■□□□□ 0.2
YER088W-BYER088W-B YDR341CQ05506 607 aaKnown RBP16.29■□□□□ 0.2
YER088W-BYER088W-B MATALPHA2P0CY08 210 aa16.28■□□□□ 0.2
YER088W-BYER088W-B HMLALPHA2P0CY09 210 aa16.28■□□□□ 0.2
YER088W-BYER088W-B RPL8AP17076 256 aaKnown RBP16.28■□□□□ 0.2
YER088W-BYER088W-B MCR1P36060 302 aaKnown RBP16.28■□□□□ 0.2
YER088W-BYER088W-B VPS29P38759 282 aa16.28■□□□□ 0.2
YER088W-BYER088W-B TPM2P40414 161 aa16.28■□□□□ 0.2
YER088W-BYER088W-B YKE2P52553 114 aa16.28■□□□□ 0.2
YER088W-BYER088W-B VIP1Q06685 1146 aaKnown RBP16.28■□□□□ 0.2
YER088W-BYER088W-B GUD1Q07729 489 aa16.28■□□□□ 0.2
YER088W-BYER088W-B TSR3Q12094 313 aaKnown RBP16.28■□□□□ 0.2
YER088W-BYER088W-B CIT1P00890 479 aa16.27■□□□□ 0.2
YER088W-BYER088W-B ASE1P50275 885 aa16.27■□□□□ 0.2
YER088W-BYER088W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data16.27■□□□□ 0.2not detected
YER088W-BYER088W-B ERP3Q12403 225 aa16.27■□□□□ 0.2
YER088W-BYER088W-B RKM4Q12504 494 aa16.27■□□□□ 0.2
YER088W-BYER088W-B MET6P05694 767 aaKnown RBP16.26■□□□□ 0.19
YER088W-BYER088W-B BRE5P53741 515 aaKnown RBP16.26■□□□□ 0.19
YER088W-BYER088W-B MYO1P08964 1928 aa16.25■□□□□ 0.19
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms