RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A TIF6Q12522 245 aaKnown RBP3.47□□□□□ -1.85
YER088C-AYER088C-A RPS13P05756 151 aaKnown RBP3.46□□□□□ -1.86
YER088C-AYER088C-A SRS2P12954 1174 aa3.46□□□□□ -1.86
YER088C-AYER088C-A PTC7P38797 343 aa3.46□□□□□ -1.86
YER088C-AYER088C-A PSY2P40164 858 aa3.46□□□□□ -1.86
YER088C-AYER088C-A EAR1Q03212 550 aa3.46□□□□□ -1.86
YER088C-AYER088C-A YLR358CO13565 187 aa3.45□□□□□ -1.86
YER088C-AYER088C-A CTS1P29029 562 aa3.45□□□□□ -1.86
YER088C-AYER088C-A SMC1P32908 1225 aa3.45□□□□□ -1.86
YER088C-AYER088C-A KTR2P33550 425 aa3.45□□□□□ -1.86
YER088C-AYER088C-A SUT1P53032 299 aaKnown RBP3.45□□□□□ -1.86
YER088C-AYER088C-A YPL277CQ08989 487 aa3.45□□□□□ -1.86
YER088C-AYER088C-A APC11Q12157 165 aa3.45□□□□□ -1.86
YER088C-AYER088C-A SMY2P32909 740 aaKnown RBP3.44□□□□□ -1.86
YER088C-AYER088C-A SHM2P37291 469 aaKnown RBP3.44□□□□□ -1.86
YER088C-AYER088C-A SNO2P53823 222 aa3.44□□□□□ -1.86
YER088C-AYER088C-A MEC3Q02574 474 aa3.44□□□□□ -1.86
YER088C-AYER088C-A ETP1P38748 585 aaKnown RBP3.43□□□□□ -1.86
YER088C-AYER088C-A GTS1P40956 396 aa3.43□□□□□ -1.86
YER088C-AYER088C-A HTS1P07263 546 aaKnown RBP3.42□□□□□ -1.86
YER088C-AYER088C-A NNK1P36003 928 aa3.42□□□□□ -1.86
YER088C-AYER088C-A TTI1P36097 1038 aa3.42□□□□□ -1.86
YER088C-AYER088C-A REI1P38344 393 aaPredicted RBP3.42□□□□□ -1.86
YER088C-AYER088C-A FOL2P51601 243 aaKnown RBP3.42□□□□□ -1.86
YER088C-AYER088C-A PRE10P21242 288 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
YER088C-AYER088C-A RRN6P32786 894 aa3.41□□□□□ -1.86
YER088C-AYER088C-A ALG6Q12001 544 aaKnown RBP3.4□□□□□ -1.87
YER088C-AYER088C-A RPB10P22139 70 aa3.39□□□□□ -1.87
YER088C-AYER088C-A NPR1P22211 790 aa3.39□□□□□ -1.87
YER088C-AYER088C-A UTP22P53254 1237 aaPredicted RBP3.39□□□□□ -1.87
YER088C-AYER088C-A RIM11P38615 370 aa3.38□□□□□ -1.87
YER088C-AYER088C-A CMR1Q12510 522 aaKnown RBP3.38□□□□□ -1.87
YER088C-AYER088C-A PRP5P21372 849 aaPredicted RBP3.37□□□□□ -1.87
YER088C-AYER088C-A ARL1P38116 183 aaKnown RBP3.37□□□□□ -1.87
YER088C-AYER088C-A TAT2P38967 592 aa3.37□□□□□ -1.87
YER088C-AYER088C-A MPT5P39016 859 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
YER088C-AYER088C-A ELA1P53861 379 aaPredicted RBP3.37□□□□□ -1.87
YER088C-AYER088C-A CTR9P89105 1077 aa3.37□□□□□ -1.87
YER088C-AYER088C-A CWC15Q03772 175 aaKnown RBP3.37□□□□□ -1.87
YER088C-AYER088C-A AVO1Q08236 1176 aa3.37□□□□□ -1.87
YER088C-AYER088C-A PUS7Q08647 676 aaKnown RBP3.37□□□□□ -1.87
YER088C-AYER088C-A PUS9Q12069 462 aa3.37□□□□□ -1.87
YER088C-AYER088C-A TRM2P33753 639 aa3.36□□□□□ -1.87
YER088C-AYER088C-A ECM2P38241 364 aaKnown RBP3.36□□□□□ -1.87
YER088C-AYER088C-A YGR045CP53229 120 aa3.36□□□□□ -1.87
YER088C-AYER088C-A YML122CQ03207 126 aa3.36□□□□□ -1.87
YER088C-AYER088C-A PNP1Q05788 311 aa3.36□□□□□ -1.87
YER088C-AYER088C-A PUP1P25043 261 aa3.35□□□□□ -1.87
YER088C-AYER088C-A ENV11P53246 860 aa3.35□□□□□ -1.87
YER088C-AYER088C-A LSO1Q3E827 93 aa3.35□□□□□ -1.87
YER088C-AYER088C-A COBP00163 385 aa3.34□□□□□ -1.87
YER088C-AYER088C-A YHL012WP38709 493 aa3.34□□□□□ -1.87
YER088C-AYER088C-A MSE1P48525 536 aa3.34□□□□□ -1.87
YER088C-AYER088C-A TPP1Q03796 238 aa3.34□□□□□ -1.87
YER088C-AYER088C-A URN1Q06525 465 aaKnown RBP3.34□□□□□ -1.87
YER088C-AYER088C-A SAM35P14693 329 aa3.33□□□□□ -1.88
YER088C-AYER088C-A MDL2P33311 773 aa3.33□□□□□ -1.88
YER088C-AYER088C-A YDR132CQ03900 495 aa3.33□□□□□ -1.88
YER088C-AYER088C-A YOR352WQ08816 343 aa3.33□□□□□ -1.88
YER088C-AYER088C-A SPT20P50875 604 aa3.32□□□□□ -1.88
YER088C-AYER088C-A CPS1P27614 576 aa3.31□□□□□ -1.88
YER088C-AYER088C-A SRO9P25567 434 aaKnown RBP3.3□□□□□ -1.88
YER088C-AYER088C-A AIM26P32858 118 aa3.3□□□□□ -1.88
YER088C-AYER088C-A SAP155P43612 1002 aa3.3□□□□□ -1.88
YER088C-AYER088C-A GCN5Q03330 439 aa3.3□□□□□ -1.88
YER088C-AYER088C-A FUR4P05316 633 aaKnown RBP3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-LR4P0C2I8 440 aaKnown RBP3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-DR6P0CX70 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-ER1P0CX71 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-LR2P0CX72 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-PLP0CX73 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-JR1P0CX74 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-LR3P0CX75 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-ML2P0CX76 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A SLI1P53304 468 aa3.29□□□□□ -1.88
YER088C-AYER088C-A DMA2P53924 522 aa3.29□□□□□ -1.88
YER088C-AYER088C-A SGD1Q06132 899 aa3.29□□□□□ -1.88
YER088C-AYER088C-A PMT7Q06644 662 aa3.29□□□□□ -1.88
YER088C-AYER088C-A HRK1Q08732 759 aaKnown RBP3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-GR1Q12085 440 aa3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP3.29□□□□□ -1.88
YER088C-AYER088C-A TY1A-OLQ92392 440 aaKnown RBP3.29□□□□□ -1.88
YER088C-AYER088C-A RAD53P22216 821 aa3.28□□□□□ -1.88
YER088C-AYER088C-A DUR3P33413 735 aa3.28□□□□□ -1.88
YER088C-AYER088C-A RSC4Q02206 625 aa3.28□□□□□ -1.88
YER088C-AYER088C-A YLR257WQ06146 321 aaKnown RBP3.28□□□□□ -1.88
YER088C-AYER088C-A SPS1P08458 490 aa3.27□□□□□ -1.89
YER088C-AYER088C-A PUF4P25339 888 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
YER088C-AYER088C-A HCM1P25364 564 aa3.27□□□□□ -1.89
YER088C-AYER088C-A DOM34P33309 386 aa3.27□□□□□ -1.89
YER088C-AYER088C-A HSE1P38753 452 aa3.27□□□□□ -1.89
YER088C-AYER088C-A LAM1P38851 1228 aa3.27□□□□□ -1.89
YER088C-AYER088C-A YAR028WP39548 234 aa3.27□□□□□ -1.89
YER088C-AYER088C-A MEF2P39677 819 aa3.27□□□□□ -1.89
YER088C-AYER088C-A AIM21P40563 679 aa3.27□□□□□ -1.89
YER088C-AYER088C-A UFD2P54860 961 aa3.27□□□□□ -1.89
YER088C-AYER088C-A CTF4Q01454 927 aa3.27□□□□□ -1.89
YER088C-AYER088C-A NBA1Q08229 501 aaKnown RBP3.27□□□□□ -1.89
YER088C-AYER088C-A RET1P22276 1149 aaKnown RBP3.26□□□□□ -1.89
YER088C-AYER088C-A STE11P23561 717 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms