RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.26	□□□□□ -1.89
DOT6	YER088C	TY1A-OL	Q92392	440 aa	Known RBP	3.26	□□□□□ -1.89
DOT6	YER088C	ECM2	P38241	364 aa	Known RBP	3.26	□□□□□ -1.89
DOT6	YER088C	EXO5	P38289	585 aa		3.26	□□□□□ -1.89
DOT6	YER088C	SKN7	P38889	622 aa		3.26	□□□□□ -1.89
DOT6	YER088C	RPS26A	P39938	119 aa	Known RBP	3.26	□□□□□ -1.89
DOT6	YER088C	RPS26B	P39939	119 aa	Known RBP	3.26	□□□□□ -1.89
DOT6	YER088C	PIC2	P40035	300 aa		3.26	□□□□□ -1.89
DOT6	YER088C	ICP55	P40051	511 aa		3.26	□□□□□ -1.89
DOT6	YER088C	OXR1	Q08952	273 aa		3.26	□□□□□ -1.89
DOT6	YER088C	ERS1	P17261	260 aa		3.25	□□□□□ -1.89
DOT6	YER088C	RDH54	P38086	958 aa		3.25	□□□□□ -1.89
DOT6	YER088C	RRM3	P38766	723 aa		3.25	□□□□□ -1.89
DOT6	YER088C	OYE2	Q03558	400 aa	Known RBP	3.25	□□□□□ -1.89
DOT6	YER088C	SPO71	Q03868	1245 aa		3.25	□□□□□ -1.89
DOT6	YER088C	GAS5	Q08193	484 aa		3.25	□□□□□ -1.89
DOT6	YER088C	TY1A-NL1	Q12391	440 aa	Known RBP	3.25	□□□□□ -1.89
DOT6	YER088C	AI3	P03877	415 aa		3.24	□□□□□ -1.89
DOT6	YER088C	RAD2	P07276	1031 aa		3.24	□□□□□ -1.89
DOT6	YER088C	SLN1	P39928	1220 aa	Predicted RBP	3.24	□□□□□ -1.89
DOT6	YER088C	NEO1	P40527	1151 aa		3.24	□□□□□ -1.89
DOT6	YER088C	ADI1	Q03677	179 aa		3.24	□□□□□ -1.89
DOT6	YER088C	PHM7	Q12252	991 aa		3.24	□□□□□ -1.89
DOT6	YER088C	PRE9	P23638	258 aa	Known RBP	3.24	□□□□□ -1.89
DOT6	YER088C	PAM1	P37304	830 aa	Known RBP	3.24	□□□□□ -1.89
DOT6	YER088C	DSE4	P53753	1117 aa		3.24	□□□□□ -1.89
DOT6	YER088C	KAR2	P16474	682 aa	Known RBP	3.23	□□□□□ -1.89
DOT6	YER088C	SAC7	P17121	654 aa		3.23	□□□□□ -1.89
DOT6	YER088C	MSH3	P25336	1018 aa		3.23	□□□□□ -1.89
DOT6	YER088C	SFA1	P32771	386 aa		3.23	□□□□□ -1.89
DOT6	YER088C	PRY1	P47032	299 aa		3.23	□□□□□ -1.89
DOT6	YER088C	GCV1	P48015	400 aa		3.23	□□□□□ -1.89
DOT6	YER088C	YGL140C	P53120	1219 aa		3.23	□□□□□ -1.89
DOT6	YER088C	NCE103	P53615	221 aa		3.23	□□□□□ -1.89
DOT6	YER088C	ELG1	Q12050	791 aa		3.23	□□□□□ -1.89
DOT6	YER088C	YPR053C	Q6Q5F3	151 aa		3.23	□□□□□ -1.89
DOT6	YER088C	SEC23	P15303	768 aa	Known RBP	3.22	□□□□□ -1.89
DOT6	YER088C	GNP1	P48813	663 aa		3.22	□□□□□ -1.89
DOT6	YER088C	UTP22	P53254	1237 aa	Predicted RBP	3.22	□□□□□ -1.89
DOT6	YER088C	MEC3	Q02574	474 aa		3.22	□□□□□ -1.89
DOT6	YER088C	YMR187C	Q03236	431 aa		3.22	□□□□□ -1.89
DOT6	YER088C	MCD1	Q12158	566 aa		3.22	□□□□□ -1.89
DOT6	YER088C	PGM1	P33401	570 aa	Known RBP	3.22	□□□□□ -1.89
DOT6	YER088C	NEM1	P38757	446 aa		3.22	□□□□□ -1.89
DOT6	YER088C	PEX28	P38848	579 aa		3.22	□□□□□ -1.89
DOT6	YER088C	MAE1	P36013	669 aa	Known RBP	3.21	□□□□□ -1.9
DOT6	YER088C	ARL1	P38116	183 aa	Known RBP	3.21	□□□□□ -1.9
DOT6	YER088C	HXT13	P39924	564 aa		3.21	□□□□□ -1.9
DOT6	YER088C	MRPS18	P42847	217 aa		3.21	□□□□□ -1.9
DOT6	YER088C	SLS1	P42900	643 aa		3.21	□□□□□ -1.9
DOT6	YER088C	KIP3	P53086	805 aa	Known RBP	3.21	□□□□□ -1.9
DOT6	YER088C	ARI1	P53111	347 aa	Known RBP	3.21	□□□□□ -1.9
DOT6	YER088C	HXT17	P53631	564 aa		3.21	□□□□□ -1.9
DOT6	YER088C	HXT15	P54854	567 aa		3.21	□□□□□ -1.9
DOT6	YER088C	RMD1	Q03441	430 aa		3.21	□□□□□ -1.9
DOT6	YER088C	MCA1	Q08601	432 aa		3.21	□□□□□ -1.9
DOT6	YER088C	SPA2	P23201	1466 aa	Known RBP	3.21	□□□□□ -1.9
DOT6	YER088C	VMA4	P22203	233 aa	Known RBP	3.2	□□□□□ -1.9
DOT6	YER088C	DUT1	P33317	147 aa		3.2	□□□□□ -1.9
DOT6	YER088C	SNU71	P53207	620 aa	Known RBP	3.2	□□□□□ -1.9
DOT6	YER088C	PEX13	P80667	386 aa		3.2	□□□□□ -1.9
DOT6	YER088C	UTP5	Q04177	643 aa	Known RBP	3.2	□□□□□ -1.9
DOT6	YER088C	ESF1	Q06344	628 aa	Known RBP	3.2	□□□□□ -1.9
DOT6	YER088C	REC8	Q12188	680 aa		3.2	□□□□□ -1.9
DOT6	YER088C	SHU2	P38957	223 aa		3.2	□□□□□ -1.9
DOT6	YER088C	CCT8	P47079	568 aa	Known RBP	3.2	□□□□□ -1.9
DOT6	YER088C	RSM26	P47141	266 aa		3.2	□□□□□ -1.9
DOT6	YER088C	HDA2	Q06629	674 aa		3.2	□□□□□ -1.9
DOT6	YER088C	GCR1	P07261	785 aa		3.19	□□□□□ -1.9
DOT6	YER088C	FAR11	P53917	953 aa		3.19	□□□□□ -1.9
DOT6	YER088C	PUS1	Q12211	544 aa	Known RBP	3.19	□□□□□ -1.9
DOT6	YER088C	SQT1	P35184	431 aa		3.19	□□□□□ -1.9
DOT6	YER088C	YKL077W	P36081	392 aa		3.19	□□□□□ -1.9
DOT6	YER088C	REI1	P38344	393 aa	Predicted RBP	3.19	□□□□□ -1.9
DOT6	YER088C	XKS1	P42826	600 aa		3.19	□□□□□ -1.9
DOT6	YER088C	SVF1	Q05515	481 aa		3.19	□□□□□ -1.9
DOT6	YER088C	ALG6	Q12001	544 aa	Known RBP	3.19	□□□□□ -1.9
DOT6	YER088C	YOR223W	Q12015	292 aa		3.19	□□□□□ -1.9
DOT6	YER088C	TAF13	P11747	167 aa		3.18	□□□□□ -1.9
DOT6	YER088C	SPO74	P45819	413 aa		3.18	□□□□□ -1.9
DOT6	YER088C	YGR045C	P53229	120 aa		3.18	□□□□□ -1.9
DOT6	YER088C	AFG2	P32794	780 aa		3.17	□□□□□ -1.9
DOT6	YER088C	TAT1	P38085	619 aa		3.17	□□□□□ -1.9
DOT6	YER088C	SIW14	P53965	281 aa		3.17	□□□□□ -1.9
DOT6	YER088C	MAG2	Q06436	670 aa	Known RBP	3.17	□□□□□ -1.9
DOT6	YER088C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
DOT6	YER088C	CDC34	P14682	295 aa		3.17	□□□□□ -1.9
DOT6	YER088C	RSC6	P25632	483 aa		3.17	□□□□□ -1.9
DOT6	YER088C	GPT2	P36148	743 aa		3.17	□□□□□ -1.9
DOT6	YER088C	YPL034W	Q03083	165 aa		3.17	□□□□□ -1.9
DOT6	YER088C	VPS16	Q03308	798 aa		3.17	□□□□□ -1.9
DOT6	YER088C	RKM2	Q03942	479 aa		3.17	□□□□□ -1.9
DOT6	YER088C	DOT1	Q04089	582 aa	Known RBP	3.17	□□□□□ -1.9
DOT6	YER088C	PIN2	Q12057	282 aa		3.17	□□□□□ -1.9
DOT6	YER088C	NAM7	P30771	971 aa	Known RBP	3.16	□□□□□ -1.9
DOT6	YER088C	PEP7	P32609	515 aa		3.16	□□□□□ -1.9
DOT6	YER088C	MNR2	P35724	969 aa		3.16	□□□□□ -1.9
DOT6	YER088C	ADD66	P36040	267 aa		3.16	□□□□□ -1.9
DOT6	YER088C	MET10	P39692	1035 aa		3.16	□□□□□ -1.9
DOT6	YER088C	MSH4	P40965	878 aa	Predicted RBP	3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms