RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C ANP1P32629 500 aa11.13□□□□□ -0.63
RIB3YDR487C GPB2P39717 880 aa11.13□□□□□ -0.63
RIB3YDR487C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
RIB3YDR487C TUS1Q06412 1307 aa11.12□□□□□ -0.63
RIB3YDR487C RAD18P10862 487 aa11.12□□□□□ -0.63
RIB3YDR487C SKI2P35207 1287 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
RIB3YDR487C YKR018CP36114 725 aa11.12□□□□□ -0.63
RIB3YDR487C AAP1P37898 856 aaKnown RBP11.12□□□□□ -0.63
RIB3YDR487C PES4P39684 611 aa11.12□□□□□ -0.63
RIB3YDR487C FOL1P53848 824 aa11.12□□□□□ -0.63
RIB3YDR487C SPN1Q06505 410 aaPredicted RBP11.12□□□□□ -0.63
RIB3YDR487C TSR3Q12094 313 aaKnown RBP11.12□□□□□ -0.63
RIB3YDR487C MYO3P36006 1272 aa11.11□□□□□ -0.63
RIB3YDR487C MXR1P40029 184 aa11.11□□□□□ -0.63
RIB3YDR487C VPS30Q02948 557 aa11.11□□□□□ -0.63
RIB3YDR487C MET7Q08645 548 aa11.11□□□□□ -0.63
RIB3YDR487C ICL2Q12031 575 aa11.11□□□□□ -0.63
RIB3YDR487C HAA1Q12753 694 aaKnown RBP11.11□□□□□ -0.63
RIB3YDR487C CDC19P00549 500 aaKnown RBP11.1□□□□□ -0.63
RIB3YDR487C PRE10P21242 288 aaKnown RBP RIP-Chip data11.1□□□□□ -0.63not detected
RIB3YDR487C RPL8BP29453 256 aaKnown RBP11.1□□□□□ -0.63
RIB3YDR487C CRG1P38892 291 aaRIP-Chip data11.1□□□□□ -0.63not detected
RIB3YDR487C VPS45P38932 577 aa11.1□□□□□ -0.63
RIB3YDR487C VPS62P53285 467 aa11.1□□□□□ -0.63
RIB3YDR487C ALD6P54115 500 aaKnown RBP11.1□□□□□ -0.63
RIB3YDR487C TPM1P17536 199 aaKnown RBP11.09□□□□□ -0.63
RIB3YDR487C SRP40P32583 406 aaPredicted RBP11.09□□□□□ -0.63
RIB3YDR487C UTR4P32626 227 aa11.09□□□□□ -0.63
RIB3YDR487C RER2P35196 286 aa11.09□□□□□ -0.63
RIB3YDR487C RPT6Q01939 405 aaKnown RBP11.09□□□□□ -0.63
RIB3YDR487C DUS4Q06063 367 aa11.09□□□□□ -0.63
RIB3YDR487C YOR131CQ12486 218 aa11.09□□□□□ -0.63
RIB3YDR487C IMP2'P32351 346 aa11.08□□□□□ -0.64
RIB3YDR487C LDH1P38139 375 aa11.08□□□□□ -0.64
RIB3YDR487C PHO88P38264 188 aaPredicted RBP11.08□□□□□ -0.64
RIB3YDR487C HDA1P53973 706 aa11.08□□□□□ -0.64
RIB3YDR487C BUL2Q03758 920 aaKnown RBP11.08□□□□□ -0.64
RIB3YDR487C NUC1P08466 329 aa11.07□□□□□ -0.64
RIB3YDR487C SAM1P10659 382 aaKnown RBP11.07□□□□□ -0.64
RIB3YDR487C TOM71P38825 639 aaKnown RBP11.07□□□□□ -0.64
RIB3YDR487C PTK2P47116 818 aaKnown RBP11.07□□□□□ -0.64
RIB3YDR487C RGT1P32862 1170 aa11.06□□□□□ -0.64
RIB3YDR487C BRN1P38170 754 aa11.06□□□□□ -0.64
RIB3YDR487C CIC1P38779 376 aaKnown RBP11.06□□□□□ -0.64
RIB3YDR487C YGR125WP53273 1036 aa11.06□□□□□ -0.64
RIB3YDR487C BRE5P53741 515 aaKnown RBP11.06□□□□□ -0.64
RIB3YDR487C ESF1Q06344 628 aaKnown RBP11.06□□□□□ -0.64
RIB3YDR487C CSC1Q06538 782 aa11.06□□□□□ -0.64
RIB3YDR487C UTP4Q06679 776 aaKnown RBP11.06□□□□□ -0.64
RIB3YDR487C CLF1Q12309 687 aaPredicted RBP11.06□□□□□ -0.64
RIB3YDR487C MAK31P23059 88 aa11.05□□□□□ -0.64
RIB3YDR487C YJR107WP47145 328 aa11.05□□□□□ -0.64
RIB3YDR487C SUT2Q12286 268 aa11.05□□□□□ -0.64
RIB3YDR487C PGA3Q12746 312 aaKnown RBP11.05□□□□□ -0.64
RIB3YDR487C ALG2P43636 503 aa11.04□□□□□ -0.64
RIB3YDR487C LSB1P53281 241 aa11.04□□□□□ -0.64
RIB3YDR487C TMA64Q04600 565 aaKnown RBP11.04□□□□□ -0.64
RIB3YDR487C TGL1P34163 548 aa11.03□□□□□ -0.64
RIB3YDR487C SHP1P34223 423 aa11.03□□□□□ -0.64
RIB3YDR487C GCR2Q01722 534 aa11.03□□□□□ -0.64
RIB3YDR487C SLD5Q03406 294 aa11.03□□□□□ -0.64
RIB3YDR487C MYO5Q04439 1219 aaKnown RBP11.03□□□□□ -0.64
RIB3YDR487C SPH1Q06160 661 aa11.03□□□□□ -0.64
RIB3YDR487C EST2Q06163 884 aa11.03□□□□□ -0.64
RIB3YDR487C TFC6Q06339 672 aa11.03□□□□□ -0.64
RIB3YDR487C SUE1Q06524 206 aa11.03□□□□□ -0.64
RIB3YDR487C MSC6Q08818 692 aaKnown RBP11.03□□□□□ -0.64
RIB3YDR487C MAM3Q12296 706 aa11.03□□□□□ -0.64
RIB3YDR487C PEP3P27801 918 aa11.02□□□□□ -0.65
RIB3YDR487C CSM2P40465 213 aa11.02□□□□□ -0.65
RIB3YDR487C HXT17P53631 564 aa11.02□□□□□ -0.65
RIB3YDR487C RKM4Q12504 494 aa11.02□□□□□ -0.65
RIB3YDR487C UIP5P36137 443 aa11.01□□□□□ -0.65
RIB3YDR487C AIM21P40563 679 aa11.01□□□□□ -0.65
RIB3YDR487C DUS3Q06053 668 aaKnown RBP11.01□□□□□ -0.65
RIB3YDR487C SIS2P36024 562 aa11□□□□□ -0.65
RIB3YDR487C MAL31P38156 614 aa11□□□□□ -0.65
RIB3YDR487C VPS29P38759 282 aa11□□□□□ -0.65
RIB3YDR487C MDM1Q01846 1127 aa11□□□□□ -0.65
RIB3YDR487C MDM20Q12387 796 aaKnown RBP11□□□□□ -0.65
RIB3YDR487C SRP54P20424 541 aaKnown RBP10.99□□□□□ -0.65
RIB3YDR487C DBP1P24784 617 aaKnown RBP10.99□□□□□ -0.65
RIB3YDR487C SEC20P28791 383 aa10.99□□□□□ -0.65
RIB3YDR487C MCR1P36060 302 aaKnown RBP10.99□□□□□ -0.65
RIB3YDR487C HXT13P39924 564 aa10.99□□□□□ -0.65
RIB3YDR487C AFG3P39925 761 aa10.99□□□□□ -0.65
RIB3YDR487C KRI1P42846 591 aaKnown RBP10.99□□□□□ -0.65
RIB3YDR487C VPS53P47061 822 aa10.99□□□□□ -0.65
RIB3YDR487C ERP3Q12403 225 aa10.99□□□□□ -0.65
RIB3YDR487C MCM4P30665 933 aaKnown RBP10.98□□□□□ -0.65
RIB3YDR487C BCS1P32839 456 aa10.98□□□□□ -0.65
RIB3YDR487C DLD1P32891 587 aa10.98□□□□□ -0.65
RIB3YDR487C KSP1P38691 1029 aaKnown RBP10.98□□□□□ -0.65
RIB3YDR487C TPM2P40414 161 aa10.98□□□□□ -0.65
RIB3YDR487C FMS1P50264 508 aa10.98□□□□□ -0.65
RIB3YDR487C YDR461C-AQ2V2P7 80 aa10.98□□□□□ -0.65
RIB3YDR487C RPL8AP17076 256 aaKnown RBP10.97□□□□□ -0.65
RIB3YDR487C PWP2P25635 923 aaKnown RBP10.97□□□□□ -0.65
RIB3YDR487C NDT80P38830 627 aa10.97□□□□□ -0.65
RIB3YDR487C YPL034WQ03083 165 aa10.97□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms