RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	GPB2	P39717	880 aa		11.57	□□□□□ -0.56
MRP20	YDR405W	UBP9	P39967	754 aa		11.57	□□□□□ -0.56
MRP20	YDR405W	ATG1	P53104	897 aa		11.57	□□□□□ -0.56
MRP20	YDR405W	RPT6	Q01939	405 aa	Known RBP	11.57	□□□□□ -0.56
MRP20	YDR405W	RPC31	P17890	251 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	MAK31	P23059	88 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	PKC1	P24583	1151 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	RPL8B	P29453	256 aa	Known RBP	11.56	□□□□□ -0.56
MRP20	YDR405W	IMP2'	P32351	346 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	SIS2	P36024	562 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	HXT17	P53631	564 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	VPS30	Q02948	557 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	EST2	Q06163	884 aa		11.56	□□□□□ -0.56
MRP20	YDR405W	VMA2	P16140	517 aa	Known RBP	11.55	□□□□□ -0.56
MRP20	YDR405W	SEC20	P28791	383 aa		11.55	□□□□□ -0.56
MRP20	YDR405W	CIC1	P38779	376 aa	Known RBP	11.55	□□□□□ -0.56
MRP20	YDR405W	VPS45	P38932	577 aa		11.55	□□□□□ -0.56
MRP20	YDR405W	HXT13	P39924	564 aa		11.55	□□□□□ -0.56
MRP20	YDR405W	MYO5	Q04439	1219 aa	Known RBP	11.55	□□□□□ -0.56
MRP20	YDR405W	ESF1	Q06344	628 aa	Known RBP	11.55	□□□□□ -0.56
MRP20	YDR405W	NUC1	P08466	329 aa		11.54	□□□□□ -0.56
MRP20	YDR405W	SAM2	P19358	384 aa	Known RBP	11.54	□□□□□ -0.56
MRP20	YDR405W	ACE2	P21192	770 aa		11.54	□□□□□ -0.56
MRP20	YDR405W	ALD6	P54115	500 aa	Known RBP	11.54	□□□□□ -0.56
MRP20	YDR405W	SRS2	P12954	1174 aa		11.53	□□□□□ -0.56
MRP20	YDR405W	EUG1	P32474	517 aa		11.53	□□□□□ -0.56
MRP20	YDR405W	TFC6	Q06339	672 aa		11.53	□□□□□ -0.56
MRP20	YDR405W	CDC19	P00549	500 aa	Known RBP	11.52	□□□□□ -0.57
MRP20	YDR405W	RAD18	P10862	487 aa		11.52	□□□□□ -0.57
MRP20	YDR405W	LSB1	P53281	241 aa		11.52	□□□□□ -0.57
MRP20	YDR405W	MAL31	P38156	614 aa		11.51	□□□□□ -0.57
MRP20	YDR405W	MXR1	P40029	184 aa		11.51	□□□□□ -0.57
MRP20	YDR405W	HDA1	P53973	706 aa		11.51	□□□□□ -0.57
MRP20	YDR405W	PTK2	P47116	818 aa	Known RBP	11.5	□□□□□ -0.57
MRP20	YDR405W	PGA3	Q12746	312 aa	Known RBP	11.5	□□□□□ -0.57
MRP20	YDR405W	PHO88	P38264	188 aa	Predicted RBP	11.49	□□□□□ -0.57
MRP20	YDR405W	TOM71	P38825	639 aa	Known RBP	11.49	□□□□□ -0.57
MRP20	YDR405W	AIM9	P40053	627 aa	Known RBP	11.49	□□□□□ -0.57
MRP20	YDR405W	PSF2	P40359	213 aa		11.49	□□□□□ -0.57
MRP20	YDR405W	SDH2	P21801	266 aa		11.48	□□□□□ -0.57
MRP20	YDR405W	KRI1	P42846	591 aa	Known RBP	11.48	□□□□□ -0.57
MRP20	YDR405W	YGR125W	P53273	1036 aa		11.48	□□□□□ -0.57
MRP20	YDR405W	MDM1	Q01846	1127 aa		11.48	□□□□□ -0.57
MRP20	YDR405W	CSC1	Q06538	782 aa		11.48	□□□□□ -0.57
MRP20	YDR405W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.48	□□□□□ -0.57	not detected
MRP20	YDR405W	RNR3	P21672	869 aa	Known RBP	11.47	□□□□□ -0.57
MRP20	YDR405W	OPY1	P38271	328 aa		11.47	□□□□□ -0.57
MRP20	YDR405W	TPM2	P40414	161 aa		11.47	□□□□□ -0.57
MRP20	YDR405W	CSM2	P40465	213 aa		11.47	□□□□□ -0.57
MRP20	YDR405W	UTP4	Q06679	776 aa	Known RBP	11.47	□□□□□ -0.57
MRP20	YDR405W	DSE3	Q08729	430 aa		11.47	□□□□□ -0.57
MRP20	YDR405W	ICL2	Q12031	575 aa		11.47	□□□□□ -0.57
MRP20	YDR405W	TRL1	P09880	827 aa	Known RBP	11.46	□□□□□ -0.57
MRP20	YDR405W	SRP54	P20424	541 aa	Known RBP	11.46	□□□□□ -0.57
MRP20	YDR405W	UTR4	P32626	227 aa		11.46	□□□□□ -0.57
MRP20	YDR405W	TGL1	P34163	548 aa		11.46	□□□□□ -0.57
MRP20	YDR405W	ECM23	Q02710	187 aa		11.46	□□□□□ -0.57
MRP20	YDR405W	SPH1	Q06160	661 aa		11.46	□□□□□ -0.57
MRP20	YDR405W	MET7	Q08645	548 aa		11.46	□□□□□ -0.57
MRP20	YDR405W	FBP26	P32604	452 aa		11.45	□□□□□ -0.58
MRP20	YDR405W	RGT1	P32862	1170 aa		11.45	□□□□□ -0.58
MRP20	YDR405W	GUD1	Q07729	489 aa		11.45	□□□□□ -0.58
MRP20	YDR405W	YOR111W	Q99210	232 aa		11.45	□□□□□ -0.58
MRP20	YDR405W	TY1B-A	O13527	1196 aa	Known RBP	11.44	□□□□□ -0.58
MRP20	YDR405W	RPL8A	P17076	256 aa	Known RBP	11.44	□□□□□ -0.58
MRP20	YDR405W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
MRP20	YDR405W	PAH1	P32567	862 aa		11.44	□□□□□ -0.58
MRP20	YDR405W	VIP1	Q06685	1146 aa	Known RBP	11.44	□□□□□ -0.58
MRP20	YDR405W	ISW2	Q08773	1120 aa		11.44	□□□□□ -0.58
MRP20	YDR405W	RNR2	P09938	399 aa	Known RBP	11.43	□□□□□ -0.58
MRP20	YDR405W	MATALPHA2	P0CY08	210 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	HMLALPHA2	P0CY09	210 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	PWP2	P25635	923 aa	Known RBP	11.43	□□□□□ -0.58
MRP20	YDR405W	VID28	P40547	921 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	YKE2	P52553	114 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	UBP10	P53874	792 aa	Predicted RBP	11.43	□□□□□ -0.58
MRP20	YDR405W	ARP5	P53946	755 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	ULP1	Q02724	621 aa		11.43	□□□□□ -0.58
MRP20	YDR405W	TMA64	Q04600	565 aa	Known RBP	11.43	□□□□□ -0.58
MRP20	YDR405W	SAM1	P10659	382 aa	Known RBP	11.42	□□□□□ -0.58
MRP20	YDR405W	SRP40	P32583	406 aa	Predicted RBP	11.42	□□□□□ -0.58
MRP20	YDR405W	SEC8	P32855	1065 aa		11.42	□□□□□ -0.58
MRP20	YDR405W	BMH2	P34730	273 aa	Known RBP	11.42	□□□□□ -0.58
MRP20	YDR405W	VPS29	P38759	282 aa		11.42	□□□□□ -0.58
MRP20	YDR405W	YDR341C	Q05506	607 aa	Known RBP	11.42	□□□□□ -0.58
MRP20	YDR405W	DUS4	Q06063	367 aa		11.42	□□□□□ -0.58
MRP20	YDR405W	MCR1	P36060	302 aa	Known RBP	11.41	□□□□□ -0.58
MRP20	YDR405W	AKR1	P39010	764 aa		11.41	□□□□□ -0.58
MRP20	YDR405W	CCT3	P39077	534 aa	Known RBP	11.41	□□□□□ -0.58
MRP20	YDR405W	AIM21	P40563	679 aa		11.41	□□□□□ -0.58
MRP20	YDR405W	YIR014W	P40570	242 aa		11.41	□□□□□ -0.58
MRP20	YDR405W	FMS1	P50264	508 aa		11.41	□□□□□ -0.58
MRP20	YDR405W	CIT1	P00890	479 aa		11.4	□□□□□ -0.58
MRP20	YDR405W	LIF1	P53150	421 aa		11.4	□□□□□ -0.58
MRP20	YDR405W	GDE1	Q02979	1223 aa		11.4	□□□□□ -0.58
MRP20	YDR405W	SUE1	Q06524	206 aa		11.4	□□□□□ -0.58
MRP20	YDR405W	ISA1	Q07821	250 aa	Predicted RBP	11.4	□□□□□ -0.58
MRP20	YDR405W	MCM4	P30665	933 aa	Known RBP	11.39	□□□□□ -0.59
MRP20	YDR405W	IME2	P32581	645 aa		11.39	□□□□□ -0.59
MRP20	YDR405W	BUL2	Q03758	920 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms