RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ARI1P53111 347 aaKnown RBP5.7□□□□□ -1.5
SHU2YDR078C ITC1P53125 1264 aa5.7□□□□□ -1.5
SHU2YDR078C YNR040WP53736 256 aa5.7□□□□□ -1.5
SHU2YDR078C SSF2Q12153 453 aaPredicted RBP5.7□□□□□ -1.5
SHU2YDR078C PYC2P32327 1180 aaKnown RBP5.69□□□□□ -1.5
SHU2YDR078C UGA4P32837 571 aa5.69□□□□□ -1.5
SHU2YDR078C YKR073CP36153 106 aa5.69□□□□□ -1.5
SHU2YDR078C APM2P38700 605 aa5.69□□□□□ -1.5
SHU2YDR078C YJL049WP47048 450 aa5.69□□□□□ -1.5
SHU2YDR078C NUT1P53114 1132 aa5.69□□□□□ -1.5
SHU2YDR078C TRP3P00937 484 aa5.68□□□□□ -1.5
SHU2YDR078C CWC24P53769 259 aa5.68□□□□□ -1.5
SHU2YDR078C ULP1Q02724 621 aa5.68□□□□□ -1.5
SHU2YDR078C ADI1Q03677 179 aa5.68□□□□□ -1.5
SHU2YDR078C WRS1Q12109 432 aaKnown RBP5.68□□□□□ -1.5
SHU2YDR078C MRP10O75012 95 aa5.67□□□□□ -1.5
SHU2YDR078C DUR3P33413 735 aa5.67□□□□□ -1.5
SHU2YDR078C RVS167P39743 482 aaKnown RBP5.67□□□□□ -1.5
SHU2YDR078C MON1P53129 644 aa5.67□□□□□ -1.5
SHU2YDR078C PMT7Q06644 662 aa5.67□□□□□ -1.5
SHU2YDR078C CDC34P14682 295 aa5.66□□□□□ -1.5
SHU2YDR078C SFA1P32771 386 aa5.66□□□□□ -1.5
SHU2YDR078C PIC2P40035 300 aa5.66□□□□□ -1.5
SHU2YDR078C YER156CP40093 338 aaKnown RBP5.66□□□□□ -1.5
SHU2YDR078C IOC3P43596 787 aa5.66□□□□□ -1.5
SHU2YDR078C SAP155P43612 1002 aa5.66□□□□□ -1.5
SHU2YDR078C COQ2P32378 372 aa5.65□□□□□ -1.5
SHU2YDR078C RIM11P38615 370 aa5.65□□□□□ -1.5
SHU2YDR078C FAA4P47912 694 aaKnown RBP5.65□□□□□ -1.5
SHU2YDR078C GDE1Q02979 1223 aa5.65□□□□□ -1.5
SHU2YDR078C MED7Q08278 222 aa5.65□□□□□ -1.5
SHU2YDR078C YLR122CQ12312 125 aa5.65□□□□□ -1.5
SHU2YDR078C SRP40P32583 406 aaPredicted RBP5.64□□□□□ -1.51
SHU2YDR078C DUT1P33317 147 aa5.64□□□□□ -1.51
SHU2YDR078C KAE1P36132 386 aa5.64□□□□□ -1.51
SHU2YDR078C BRN1P38170 754 aa5.64□□□□□ -1.51
SHU2YDR078C NMD2P38798 1089 aaKnown RBP5.64□□□□□ -1.51
SHU2YDR078C DOS2P54858 310 aa5.64□□□□□ -1.51
SHU2YDR078C NSE3Q05541 303 aa5.64□□□□□ -1.51
SHU2YDR078C PPT1P53043 513 aa5.63□□□□□ -1.51
SHU2YDR078C YAF9P53930 226 aa5.63□□□□□ -1.51
SHU2YDR078C RSC2Q06488 889 aa5.63□□□□□ -1.51
SHU2YDR078C RTT10Q08924 1013 aa5.63□□□□□ -1.51
SHU2YDR078C CMR1Q12510 522 aaKnown RBP5.63□□□□□ -1.51
SHU2YDR078C GCR1P07261 785 aa5.62□□□□□ -1.51
SHU2YDR078C FUS1P11710 512 aa5.62□□□□□ -1.51
SHU2YDR078C IDI1P15496 288 aa5.62□□□□□ -1.51
SHU2YDR078C STI1P15705 589 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
SHU2YDR078C YKL091CP33324 310 aaKnown RBP5.62□□□□□ -1.51
SHU2YDR078C SQT1P35184 431 aa5.62□□□□□ -1.51
SHU2YDR078C SPC42P36094 363 aa5.62□□□□□ -1.51
SHU2YDR078C RSM26P47141 266 aa5.62□□□□□ -1.51
SHU2YDR078C CTH1P47976 325 aa5.62□□□□□ -1.51
SHU2YDR078C YGR053CP53234 283 aa5.62□□□□□ -1.51
SHU2YDR078C PRP5P21372 849 aaPredicted RBP5.61□□□□□ -1.51
SHU2YDR078C NPR1P22211 790 aa5.61□□□□□ -1.51
SHU2YDR078C LIP5P32875 414 aa5.61□□□□□ -1.51
SHU2YDR078C TOS1P38288 455 aa5.61□□□□□ -1.51
SHU2YDR078C TAT2P38967 592 aa5.61□□□□□ -1.51
SHU2YDR078C NOG1Q02892 647 aaKnown RBP5.61□□□□□ -1.51
SHU2YDR078C TAF13P11747 167 aa5.6□□□□□ -1.51
SHU2YDR078C SEC23P15303 768 aaKnown RBP5.6□□□□□ -1.51
SHU2YDR078C XKS1P42826 600 aa5.6□□□□□ -1.51
SHU2YDR078C GNP1P48813 663 aa5.6□□□□□ -1.51
SHU2YDR078C RNH70P53331 553 aa5.6□□□□□ -1.51
SHU2YDR078C RPN4Q03465 531 aa5.6□□□□□ -1.51
SHU2YDR078C BDF2Q07442 638 aa5.6□□□□□ -1.51
SHU2YDR078C OPI10Q08202 246 aa5.6□□□□□ -1.51
SHU2YDR078C CDC53Q12018 815 aaKnown RBP5.6□□□□□ -1.51
SHU2YDR078C GLO4Q12320 285 aa5.6□□□□□ -1.51
SHU2YDR078C CIT2P08679 460 aa5.59□□□□□ -1.51
SHU2YDR078C GRX1P25373 110 aaKnown RBP5.59□□□□□ -1.51
SHU2YDR078C PEX28P38848 579 aa5.59□□□□□ -1.51
SHU2YDR078C OSW7P43611 510 aa5.59□□□□□ -1.51
SHU2YDR078C TDA5Q06417 326 aaKnown RBP5.59□□□□□ -1.51
SHU2YDR078C MRL1Q06815 381 aa5.59□□□□□ -1.51
SHU2YDR078C TMA46Q12000 345 aaKnown RBP5.59□□□□□ -1.51
SHU2YDR078C PRI2P20457 528 aa5.58□□□□□ -1.52
SHU2YDR078C RSC6P25632 483 aa5.58□□□□□ -1.52
SHU2YDR078C PUB1P32588 453 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SHU2YDR078C SPF1P39986 1215 aaKnown RBP5.58□□□□□ -1.52
SHU2YDR078C YGL140CP53120 1219 aa5.58□□□□□ -1.52
SHU2YDR078C EEB1Q02891 456 aa5.58□□□□□ -1.52
SHU2YDR078C NAN1Q02931 896 aaKnown RBP5.58□□□□□ -1.52
SHU2YDR078C IOC4Q04213 475 aa5.58□□□□□ -1.52
SHU2YDR078C AOS1Q06624 347 aa5.58□□□□□ -1.52
SHU2YDR078C SLP1Q12232 587 aa5.58□□□□□ -1.52
SHU2YDR078C HVG1P0CE11 249 aa5.57□□□□□ -1.52
SHU2YDR078C RAD27P26793 382 aa5.57□□□□□ -1.52
SHU2YDR078C PBP2P38151 413 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SHU2YDR078C SHU2P38957 223 aa5.57□□□□□ -1.52
SHU2YDR078C INP51P40559 946 aaKnown RBP5.57□□□□□ -1.52
SHU2YDR078C BUD6P41697 788 aa5.57□□□□□ -1.52
SHU2YDR078C BIO5P53744 561 aaKnown RBP5.57□□□□□ -1.52
SHU2YDR078C PEX13P80667 386 aa5.57□□□□□ -1.52
SHU2YDR078C BRE4Q07660 1125 aa5.57□□□□□ -1.52
SHU2YDR078C FAL1Q12099 399 aaKnown RBP5.57□□□□□ -1.52
SHU2YDR078C TY1A-NL1Q12391 440 aaKnown RBP5.57□□□□□ -1.52
SHU2YDR078C YOR131CQ12486 218 aa5.57□□□□□ -1.52
SHU2YDR078C TY4B-PA0A0B7P3V8 1104 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms