RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	NOP8	Q08287	484 aa	Predicted RBP	5.06	□□□□□ -1.6
YDL228C	YDL228C	RRG1	Q12167	365 aa	Predicted RBP	5.06	□□□□□ -1.6
YDL228C	YDL228C	RPS19A	P07280	144 aa	Known RBP	5.05	□□□□□ -1.6
YDL228C	YDL228C	RPS19B	P07281	144 aa	Predicted RBP	5.05	□□□□□ -1.6
YDL228C	YDL228C	ISF1	P32488	338 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	SLA1	P32790	1244 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	PRS1	P32895	427 aa	Known RBP	5.05	□□□□□ -1.6
YDL228C	YDL228C	BIM1	P40013	344 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	YIL089W	P40500	205 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	YGR117C	P53270	476 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	YNL108C	P53929	270 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	TIM50	Q02776	476 aa		5.05	□□□□□ -1.6
YDL228C	YDL228C	DUR1,2	P32528	1835 aa	Known RBP	5.04	□□□□□ -1.6
YDL228C	YDL228C	ADR1	P07248	1323 aa		5.04	□□□□□ -1.6
YDL228C	YDL228C	HPR1	P17629	752 aa	Known RBP	5.04	□□□□□ -1.6
YDL228C	YDL228C	UTP7	P40055	554 aa	Known RBP	5.04	□□□□□ -1.6
YDL228C	YDL228C	EMP47	P43555	445 aa		5.04	□□□□□ -1.6
YDL228C	YDL228C	PRP42	Q03776	544 aa	Known RBP	5.04	□□□□□ -1.6
YDL228C	YDL228C	ENO2	P00925	437 aa	Known RBP	5.03	□□□□□ -1.6
YDL228C	YDL228C	SEC18	P18759	758 aa	Known RBP	5.03	□□□□□ -1.6
YDL228C	YDL228C	ETP1	P38748	585 aa	Known RBP	5.03	□□□□□ -1.6
YDL228C	YDL228C	FUN12	P39730	1002 aa	Known RBP	5.03	□□□□□ -1.6
YDL228C	YDL228C	MTC3	P53077	123 aa		5.03	□□□□□ -1.6
YDL228C	YDL228C	UBX2	Q04228	584 aa		5.03	□□□□□ -1.6
YDL228C	YDL228C	MET32	Q12041	191 aa		5.03	□□□□□ -1.6
YDL228C	YDL228C	SNU66	Q12420	587 aa	Predicted RBP	5.03	□□□□□ -1.6
YDL228C	YDL228C	ARG82	P07250	355 aa		5.02	□□□□□ -1.61
YDL228C	YDL228C	VAC17	P25591	423 aa		5.02	□□□□□ -1.61
YDL228C	YDL228C	RPS7A	P26786	190 aa	Known RBP	5.02	□□□□□ -1.61
YDL228C	YDL228C	RPT3	P33298	428 aa	Known RBP	5.02	□□□□□ -1.61
YDL228C	YDL228C	GLO3	P38682	493 aa	Known RBP	5.02	□□□□□ -1.61
YDL228C	YDL228C	PNT1	P38969	423 aa		5.02	□□□□□ -1.61
YDL228C	YDL228C	HAL5	P38970	855 aa	Known RBP	5.02	□□□□□ -1.61
YDL228C	YDL228C	PEA2	P40091	420 aa		5.02	□□□□□ -1.61
YDL228C	YDL228C	CRF1	Q04930	467 aa		5.02	□□□□□ -1.61
YDL228C	YDL228C	WRS1	Q12109	432 aa	Known RBP	5.02	□□□□□ -1.61
YDL228C	YDL228C	POM152	P39685	1337 aa		5.01	□□□□□ -1.61
YDL228C	YDL228C	CBP1	P07252	654 aa		5.01	□□□□□ -1.61
YDL228C	YDL228C	YNG2	P38806	282 aa	Known RBP	5.01	□□□□□ -1.61
YDL228C	YDL228C	YNL193W	P53870	558 aa		5.01	□□□□□ -1.61
YDL228C	YDL228C	RPN7	Q06103	429 aa	Known RBP	5.01	□□□□□ -1.61
YDL228C	YDL228C	SUP35	P05453	685 aa	Known RBP	5	□□□□□ -1.61
YDL228C	YDL228C	SUP45	P12385	437 aa	Known RBP	5	□□□□□ -1.61
YDL228C	YDL228C	TEC1	P18412	486 aa		5	□□□□□ -1.61
YDL228C	YDL228C	GCD7	P32502	381 aa	Predicted RBP	5	□□□□□ -1.61
YDL228C	YDL228C	KTR3	P38130	404 aa	Predicted RBP	5	□□□□□ -1.61
YDL228C	YDL228C	NUG1	P40010	520 aa	Known RBP	5	□□□□□ -1.61
YDL228C	YDL228C	YIR042C	P40586	236 aa		5	□□□□□ -1.61
YDL228C	YDL228C	YFH7	P43591	353 aa		5	□□□□□ -1.61
YDL228C	YDL228C	YRB30	P53107	440 aa	Predicted RBP	5	□□□□□ -1.61
YDL228C	YDL228C	SPO1	P53541	631 aa		5	□□□□□ -1.61
YDL228C	YDL228C	DUS1	P53759	423 aa	Known RBP	5	□□□□□ -1.61
YDL228C	YDL228C	NSG2	P53898	299 aa		5	□□□□□ -1.61
YDL228C	YDL228C	CWC15	Q03772	175 aa	Known RBP	5	□□□□□ -1.61
YDL228C	YDL228C	MCM16	Q12262	181 aa		5	□□□□□ -1.61
YDL228C	YDL228C	TIF1	P10081	395 aa	Known RBP	4.99	□□□□□ -1.61
YDL228C	YDL228C	SNF3	P10870	884 aa		4.99	□□□□□ -1.61
YDL228C	YDL228C	JJJ2	P46997	583 aa		4.99	□□□□□ -1.61
YDL228C	YDL228C	SEN54	Q02825	467 aa	Predicted RBP	4.99	□□□□□ -1.61
YDL228C	YDL228C	VPS13	Q07878	3144 aa		4.99	□□□□□ -1.61
YDL228C	YDL228C	RAD2	P07276	1031 aa		4.98	□□□□□ -1.61
YDL228C	YDL228C	RDS2	P19541	446 aa	Known RBP	4.98	□□□□□ -1.61
YDL228C	YDL228C	IXR1	P33417	597 aa		4.98	□□□□□ -1.61
YDL228C	YDL228C	PTK1	P36002	662 aa	Predicted RBP	4.98	□□□□□ -1.61
YDL228C	YDL228C	POL32	P47110	350 aa		4.98	□□□□□ -1.61
YDL228C	YDL228C	INM2	Q05533	292 aa		4.98	□□□□□ -1.61
YDL228C	YDL228C	ENO1	P00924	437 aa	Known RBP	4.97	□□□□□ -1.61
YDL228C	YDL228C	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	KIP2	P28743	706 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	SSF1	P38789	453 aa	Predicted RBP	4.97	□□□□□ -1.61
YDL228C	YDL228C	RIM21	P48565	533 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	HED1	Q03937	162 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	PUF6	Q04373	656 aa	Known RBP	4.97	□□□□□ -1.61
YDL228C	YDL228C	ACK1	Q07622	623 aa	Predicted RBP	4.97	□□□□□ -1.61
YDL228C	YDL228C	PSF3	Q12146	194 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	CSR2	Q12734	1121 aa		4.97	□□□□□ -1.61
YDL228C	YDL228C	GSC2	P40989	1895 aa		4.96	□□□□□ -1.61
YDL228C	YDL228C	KEL1	P38853	1164 aa	Known RBP	4.96	□□□□□ -1.62
YDL228C	YDL228C	NIT1	P40447	199 aa		4.96	□□□□□ -1.62
YDL228C	YDL228C	HGH1	P48362	394 aa	Known RBP	4.96	□□□□□ -1.62
YDL228C	YDL228C	NAF1	P53919	492 aa	Known RBP	4.96	□□□□□ -1.62
YDL228C	YDL228C	RRI2	Q12348	645 aa		4.96	□□□□□ -1.62
YDL228C	YDL228C	FLO1	P32768	1537 aa		4.96	□□□□□ -1.62
YDL228C	YDL228C	GRX7	P38068	203 aa		4.95	□□□□□ -1.62
YDL228C	YDL228C	APL6	P46682	809 aa		4.95	□□□□□ -1.62
YDL228C	YDL228C	YGL242C	P53066	181 aa		4.95	□□□□□ -1.62
YDL228C	YDL228C	ALO1	P54783	526 aa	Known RBP	4.95	□□□□□ -1.62
YDL228C	YDL228C	SYH1	Q02875	849 aa	Known RBP	4.95	□□□□□ -1.62
YDL228C	YDL228C	MRX10	Q05648	414 aa		4.95	□□□□□ -1.62
YDL228C	YDL228C	CDC4	P07834	779 aa		4.94	□□□□□ -1.62
YDL228C	YDL228C	RAD53	P22216	821 aa		4.94	□□□□□ -1.62
YDL228C	YDL228C	MDL2	P33311	773 aa		4.94	□□□□□ -1.62
YDL228C	YDL228C	RRT6	P53117	311 aa	Predicted RBP	4.94	□□□□□ -1.62
YDL228C	YDL228C	PIB2	P53191	635 aa		4.94	□□□□□ -1.62
YDL228C	YDL228C	FRA1	Q07825	749 aa		4.94	□□□□□ -1.62
YDL228C	YDL228C	NOT3	P06102	836 aa	Known RBP	4.93	□□□□□ -1.62
YDL228C	YDL228C	PIF1	P07271	859 aa		4.93	□□□□□ -1.62
YDL228C	YDL228C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
YDL228C	YDL228C	SPT5	P27692	1063 aa	Known RBP	4.93	□□□□□ -1.62
YDL228C	YDL228C	GUT2	P32191	649 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms