RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W TPD3P31383 635 aa2.37□□□□□ -2.03
TRM3YDL112W NUP85P46673 744 aa2.37□□□□□ -2.03
TRM3YDL112W RSM26P47141 266 aa2.37□□□□□ -2.03
TRM3YDL112W MSB3P48566 633 aaPredicted RBP2.37□□□□□ -2.03
TRM3YDL112W UBP2Q01476 1272 aa2.37□□□□□ -2.03
TRM3YDL112W TAF8Q03750 510 aa2.37□□□□□ -2.03
TRM3YDL112W PDC6P26263 563 aaKnown RBP2.36□□□□□ -2.03
TRM3YDL112W MRT4P33201 236 aaKnown RBP2.36□□□□□ -2.03
TRM3YDL112W ATG14P38270 344 aa2.36□□□□□ -2.03
TRM3YDL112W RPS26AP39938 119 aaKnown RBP2.36□□□□□ -2.03
TRM3YDL112W RPS26BP39939 119 aaKnown RBP2.36□□□□□ -2.03
TRM3YDL112W APL6P46682 809 aa2.36□□□□□ -2.03
TRM3YDL112W PRE9P23638 258 aaKnown RBP2.36□□□□□ -2.03
TRM3YDL112W SEC8P32855 1065 aa2.36□□□□□ -2.03
TRM3YDL112W SHM1P37292 490 aaPredicted RBP2.36□□□□□ -2.03
TRM3YDL112W RCM1P53972 490 aa2.36□□□□□ -2.03
TRM3YDL112W PEX13P80667 386 aa2.36□□□□□ -2.03
TRM3YDL112W YML133CQ03099 1374 aa2.36□□□□□ -2.03
TRM3YDL112W YLL067CQ07888 1374 aa2.36□□□□□ -2.03
TRM3YDL112W SPT2P06843 333 aaPredicted RBP2.36□□□□□ -2.03
TRM3YDL112W PRI2P20457 528 aa2.36□□□□□ -2.03
TRM3YDL112W PSH1Q12161 406 aa2.36□□□□□ -2.03
TRM3YDL112W LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
TRM3YDL112W HXT8P40886 569 aa2.36□□□□□ -2.03
TRM3YDL112W PPT1P53043 513 aa2.36□□□□□ -2.03
TRM3YDL112W MEC3Q02574 474 aa2.36□□□□□ -2.03
TRM3YDL112W DAL4Q04895 635 aa2.36□□□□□ -2.03
TRM3YDL112W WHI5Q12416 295 aa2.36□□□□□ -2.03
TRM3YDL112W TY1A-DR3Q12441 440 aa2.36□□□□□ -2.03
TRM3YDL112W KAP122P32767 1081 aa2.35□□□□□ -2.03
TRM3YDL112W CEM1P39525 442 aa2.35□□□□□ -2.03
TRM3YDL112W UTP22P53254 1237 aaPredicted RBP2.35□□□□□ -2.03
TRM3YDL112W INP54Q08227 384 aaKnown RBP2.35□□□□□ -2.03
TRM3YDL112W ATE1P16639 503 aa2.35□□□□□ -2.03
TRM3YDL112W FPS1P23900 669 aa2.35□□□□□ -2.03
TRM3YDL112W NGR1P32831 672 aaKnown RBP2.35□□□□□ -2.03
TRM3YDL112W AIM46P38885 310 aa2.35□□□□□ -2.03
TRM3YDL112W ALD3P54114 506 aa2.35□□□□□ -2.03
TRM3YDL112W CUS1Q02554 436 aaPredicted RBP2.35□□□□□ -2.03
TRM3YDL112W RAD4P14736 754 aa2.35□□□□□ -2.03
TRM3YDL112W MSN1P22148 382 aa2.35□□□□□ -2.03
TRM3YDL112W SEC20P28791 383 aa2.35□□□□□ -2.03
TRM3YDL112W MET22P32179 357 aa2.35□□□□□ -2.03
TRM3YDL112W FYV10P40492 516 aa2.35□□□□□ -2.03
TRM3YDL112W NEO1P40527 1151 aa2.35□□□□□ -2.03
TRM3YDL112W NOC3Q07896 663 aaPredicted RBP2.35□□□□□ -2.03
TRM3YDL112W MHP1P43638 1398 aa2.34□□□□□ -2.03
TRM3YDL112W NCL1P38205 684 aaKnown RBP2.34□□□□□ -2.03
TRM3YDL112W DYS1P38791 387 aa2.34□□□□□ -2.03
TRM3YDL112W OXR1Q08952 273 aa2.34□□□□□ -2.03
TRM3YDL112W SPE2P21182 396 aa2.34□□□□□ -2.04
TRM3YDL112W NAB2P32505 525 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04not detected
TRM3YDL112W SQT1P35184 431 aa2.34□□□□□ -2.04
TRM3YDL112W YKL133CP36066 463 aa2.34□□□□□ -2.04
TRM3YDL112W YNR014WP53719 212 aa2.34□□□□□ -2.04
TRM3YDL112W TOS1P38288 455 aa2.33□□□□□ -2.04
TRM3YDL112W VAC8P39968 578 aa2.33□□□□□ -2.04
TRM3YDL112W LYS4P49367 693 aaPredicted RBP2.33□□□□□ -2.04
TRM3YDL112W ATG1P53104 897 aa2.33□□□□□ -2.04
TRM3YDL112W SRC1Q03707 834 aa2.33□□□□□ -2.04
TRM3YDL112W SEC3P33332 1336 aaKnown RBP2.33□□□□□ -2.04
TRM3YDL112W SCD5P34758 872 aa2.33□□□□□ -2.04
TRM3YDL112W SSN3P39073 555 aa2.33□□□□□ -2.04
TRM3YDL112W SPR3P41901 512 aa2.33□□□□□ -2.04
TRM3YDL112W XKS1P42826 600 aa2.33□□□□□ -2.04
TRM3YDL112W SOK2P53438 785 aaPredicted RBP2.33□□□□□ -2.04
TRM3YDL112W TRS120Q04183 1289 aa2.33□□□□□ -2.04
TRM3YDL112W TAP42Q04372 366 aa2.33□□□□□ -2.04
TRM3YDL112W UGA4P32837 571 aa2.33□□□□□ -2.04
TRM3YDL112W MSC6Q08818 692 aaKnown RBP2.33□□□□□ -2.04
TRM3YDL112W YRF1-4O13559 1382 aa2.32□□□□□ -2.04
TRM3YDL112W COBP00163 385 aa2.32□□□□□ -2.04
TRM3YDL112W MCM5P29496 775 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W NMD3P38861 518 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W YIR007WP40566 764 aa2.32□□□□□ -2.04
TRM3YDL112W SNU71P53207 620 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W YNR040WP53736 256 aa2.32□□□□□ -2.04
TRM3YDL112W TIF6Q12522 245 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W GRX1P25373 110 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W GRX4P32642 244 aa2.32□□□□□ -2.04
TRM3YDL112W CTF4Q01454 927 aa2.32□□□□□ -2.04
TRM3YDL112W FIG2P25653 1609 aa2.32□□□□□ -2.04
TRM3YDL112W CTT1P06115 562 aa2.32□□□□□ -2.04
TRM3YDL112W HEM3P28789 327 aa2.32□□□□□ -2.04
TRM3YDL112W SMC1P32908 1225 aa2.32□□□□□ -2.04
TRM3YDL112W ERT1P38140 529 aa2.32□□□□□ -2.04
TRM3YDL112W NAM8Q00539 523 aaKnown RBP2.32□□□□□ -2.04
TRM3YDL112W MRL1Q06815 381 aa2.32□□□□□ -2.04
TRM3YDL112W BUG1Q12191 341 aa2.32□□□□□ -2.04
TRM3YDL112W POM152P39685 1337 aa2.31□□□□□ -2.04
TRM3YDL112W MOT2P34909 587 aaKnown RBP2.31□□□□□ -2.04
TRM3YDL112W ISW1P38144 1129 aa2.31□□□□□ -2.04
TRM3YDL112W HXT5P38695 592 aa2.31□□□□□ -2.04
TRM3YDL112W OSH7P38755 437 aa2.31□□□□□ -2.04
TRM3YDL112W PSY2P40164 858 aa2.31□□□□□ -2.04
TRM3YDL112W ALD6P54115 500 aaKnown RBP2.31□□□□□ -2.04
TRM3YDL112W RPO41P13433 1351 aaKnown RBP2.31□□□□□ -2.04
TRM3YDL112W ROG3P43602 733 aa2.31□□□□□ -2.04
TRM3YDL112W HKR1P41809 1802 aa2.31□□□□□ -2.04
TRM3YDL112W GIP1P38229 639 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms