RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	LSB6	P42951	607 aa		5.06	□□□□□ -1.6
HCM1	YCR065W	NUT1	P53114	1132 aa		5.06	□□□□□ -1.6
HCM1	YCR065W	YNR065C	P53751	1116 aa		5.06	□□□□□ -1.6
HCM1	YCR065W	SOG2	Q08817	791 aa		5.06	□□□□□ -1.6
HCM1	YCR065W	PLP2	Q12017	286 aa		5.06	□□□□□ -1.6
HCM1	YCR065W	NPR1	P22211	790 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	NMD2	P38798	1089 aa	Known RBP	5.05	□□□□□ -1.6
HCM1	YCR065W	FAA3	P39002	694 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	TED1	P40533	473 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	YNR014W	P53719	212 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	GIR2	Q03768	265 aa	Predicted RBP	5.05	□□□□□ -1.6
HCM1	YCR065W	FPR4	Q06205	392 aa	Predicted RBP	5.05	□□□□□ -1.6
HCM1	YCR065W	THI72	Q08579	599 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	HSP82	P02829	709 aa	Known RBP	5.05	□□□□□ -1.6
HCM1	YCR065W	MCM2	P29469	868 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	BOI2	P39969	1040 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	SAP155	P43612	1002 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	YJR107W	P47145	328 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	DAL4	Q04895	635 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	SPR28	Q04921	423 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	TDA6	Q06466	467 aa		5.05	□□□□□ -1.6
HCM1	YCR065W	GIP2	P40036	548 aa		5.04	□□□□□ -1.6
HCM1	YCR065W	NSG2	P53898	299 aa		5.04	□□□□□ -1.6
HCM1	YCR065W	YCS4	Q06156	1176 aa		5.04	□□□□□ -1.6
HCM1	YCR065W	SEC8	P32855	1065 aa		5.03	□□□□□ -1.6
HCM1	YCR065W	PRP40	P33203	583 aa	Known RBP	5.03	□□□□□ -1.6
HCM1	YCR065W	PMC1	P38929	1173 aa	Predicted RBP	5.03	□□□□□ -1.6
HCM1	YCR065W	HAS1	Q03532	505 aa	Known RBP	5.03	□□□□□ -1.6
HCM1	YCR065W	QCR6	P00127	147 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	PRP5	P21372	849 aa	Predicted RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	MET1	P36150	593 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	MGE1	P38523	228 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	PAN5	P38787	379 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	NEO1	P40527	1151 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	FET4	P40988	552 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	HXK1	P04806	485 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	RPA135	P22138	1203 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	MCM5	P29496	775 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	MPE1	P35728	441 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	RPS26A	P39938	119 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	RPS26B	P39939	119 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	GUP1	P53154	560 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	OYE2	Q03558	400 aa	Known RBP	5.02	□□□□□ -1.61
HCM1	YCR065W	OXR1	Q08952	273 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	SLP1	Q12232	587 aa		5.02	□□□□□ -1.61
HCM1	YCR065W	RNA1	P11745	407 aa	Known RBP	5.01	□□□□□ -1.61
HCM1	YCR065W	PMT7	Q06644	662 aa		5.01	□□□□□ -1.61
HCM1	YCR065W	GAS5	Q08193	484 aa		5.01	□□□□□ -1.61
HCM1	YCR065W	MFT1	P33441	392 aa	Known RBP	5	□□□□□ -1.61
HCM1	YCR065W	RRM3	P38766	723 aa		5	□□□□□ -1.61
HCM1	YCR065W	RVS167	P39743	482 aa	Known RBP	5	□□□□□ -1.61
HCM1	YCR065W	POL5	P39985	1022 aa	Known RBP	5	□□□□□ -1.61
HCM1	YCR065W	MEH1	Q02205	184 aa		5	□□□□□ -1.61
HCM1	YCR065W	ULP1	Q02724	621 aa		5	□□□□□ -1.61
HCM1	YCR065W	YDL121C	Q07541	149 aa		5	□□□□□ -1.61
HCM1	YCR065W	TY4B-P	A0A0B7P3V8	1104 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-DR6	P0CX70	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-ER1	P0CX71	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-LR2	P0CX72	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-PL	P0CX73	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-JR1	P0CX74	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-LR3	P0CX75	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-ML2	P0CX76	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	VMA4	P22203	233 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	TPM2	P40414	161 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	YGR122W	P53272	402 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-GR1	Q12085	440 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	TY4A-H	Q6Q5P6	413 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	TY1A-OL	Q92392	440 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	HTS1	P07263	546 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	CYC8	P14922	966 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	MCX1	P38323	520 aa	Predicted RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	ERP2	P39704	215 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	NOC2	P39744	710 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	TMA64	Q04600	565 aa	Known RBP	4.99	□□□□□ -1.61
HCM1	YCR065W	PSK2	Q08217	1101 aa		4.99	□□□□□ -1.61
HCM1	YCR065W	ERS1	P17261	260 aa		4.98	□□□□□ -1.61
HCM1	YCR065W	YCK2	P23292	546 aa	Known RBP	4.98	□□□□□ -1.61
HCM1	YCR065W	SLN1	P39928	1220 aa	Predicted RBP	4.98	□□□□□ -1.61
HCM1	YCR065W	VPS27	P40343	622 aa	Known RBP	4.98	□□□□□ -1.61
HCM1	YCR065W	LEM3	P42838	414 aa		4.98	□□□□□ -1.61
HCM1	YCR065W	PRY1	P47032	299 aa		4.98	□□□□□ -1.61
HCM1	YCR065W	YPL109C	Q02981	657 aa		4.98	□□□□□ -1.61
HCM1	YCR065W	YDR215C	Q12240	137 aa		4.98	□□□□□ -1.61
HCM1	YCR065W	PIC2	P40035	300 aa		4.97	□□□□□ -1.61
HCM1	YCR065W	BUD9	P53226	547 aa		4.97	□□□□□ -1.61
HCM1	YCR065W	SPO71	Q03868	1245 aa		4.97	□□□□□ -1.61
HCM1	YCR065W	YIG1	Q08956	461 aa		4.97	□□□□□ -1.61
HCM1	YCR065W	HSC82	P15108	705 aa	Known RBP	4.96	□□□□□ -1.61
HCM1	YCR065W	SAC7	P17121	654 aa		4.96	□□□□□ -1.61
HCM1	YCR065W	EXO5	P38289	585 aa		4.96	□□□□□ -1.61
HCM1	YCR065W	GRX3	Q03835	250 aa		4.96	□□□□□ -1.61
HCM1	YCR065W	IES1	P43579	692 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	LSB3	P43603	459 aa	Known RBP	4.96	□□□□□ -1.62
HCM1	YCR065W	RSM26	P47141	266 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	NNF1	P47149	201 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	RNH70	P53331	553 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	PEX13	P80667	386 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms