RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YGR016WP53209 190 aa6.67□□□□□ -1.34
SEC18YBR080C APP1P53933 587 aa6.67□□□□□ -1.34
SEC18YBR080C YNL058CP53947 316 aa6.67□□□□□ -1.34
SEC18YBR080C RRP9Q06506 573 aaKnown RBP6.67□□□□□ -1.34
SEC18YBR080C OXR1Q08952 273 aa6.67□□□□□ -1.34
SEC18YBR080C FAL1Q12099 399 aaKnown RBP6.67□□□□□ -1.34
SEC18YBR080C HSP60P19882 572 aaKnown RBP6.67□□□□□ -1.34
SEC18YBR080C ABZ1P37254 787 aaPredicted RBP6.67□□□□□ -1.34
SEC18YBR080C MNT3P40549 630 aa6.67□□□□□ -1.34
SEC18YBR080C UBA2P52488 636 aa6.67□□□□□ -1.34
SEC18YBR080C PHM6Q05637 104 aa6.67□□□□□ -1.34
SEC18YBR080C HDA3Q06623 655 aa6.67□□□□□ -1.34
SEC18YBR080C NOC3Q07896 663 aaPredicted RBP6.67□□□□□ -1.34
SEC18YBR080C RRP6Q12149 733 aaKnown RBP6.67□□□□□ -1.34
SEC18YBR080C MCD1Q12158 566 aa6.67□□□□□ -1.34
SEC18YBR080C GYP5Q12344 894 aa6.67□□□□□ -1.34
SEC18YBR080C QCR6P00127 147 aa6.66□□□□□ -1.34
SEC18YBR080C ANP1P32629 500 aa6.66□□□□□ -1.34
SEC18YBR080C YHL041WP38730 149 aa6.66□□□□□ -1.34
SEC18YBR080C YCK3P39962 524 aa6.66□□□□□ -1.34
SEC18YBR080C MRPS18P42847 217 aa6.66□□□□□ -1.34
SEC18YBR080C YPL109CQ02981 657 aa6.66□□□□□ -1.34
SEC18YBR080C DAL4Q04895 635 aa6.66□□□□□ -1.34
SEC18YBR080C MED1Q12321 566 aa6.66□□□□□ -1.34
SEC18YBR080C NAT1P12945 854 aaKnown RBP6.66□□□□□ -1.34
SEC18YBR080C IXR1P33417 597 aa6.66□□□□□ -1.34
SEC18YBR080C NTH2P35172 780 aa6.66□□□□□ -1.34
SEC18YBR080C GPP2P40106 250 aaKnown RBP6.66□□□□□ -1.34
SEC18YBR080C TAF1P46677 1066 aa6.66□□□□□ -1.34
SEC18YBR080C MSB4Q12317 492 aa6.66□□□□□ -1.34
SEC18YBR080C BAS1P22035 811 aa6.65□□□□□ -1.34
SEC18YBR080C NOP4P37838 685 aaKnown RBP6.65□□□□□ -1.34
SEC18YBR080C CDC45Q08032 650 aa6.65□□□□□ -1.34
SEC18YBR080C NUP145P49687 1317 aa6.65□□□□□ -1.34
SEC18YBR080C KIP2P28743 706 aa6.65□□□□□ -1.35
SEC18YBR080C BRF1P29056 596 aa6.65□□□□□ -1.35
SEC18YBR080C MRS6P32864 603 aaKnown RBP6.65□□□□□ -1.35
SEC18YBR080C MGS1P40151 587 aa6.65□□□□□ -1.35
SEC18YBR080C HSV2P50079 448 aaPredicted RBP6.65□□□□□ -1.35
SEC18YBR080C ALR1Q08269 859 aa6.65□□□□□ -1.35
SEC18YBR080C SBP1P10080 294 aaKnown RBP6.64□□□□□ -1.35
SEC18YBR080C KTR4P38131 464 aa6.64□□□□□ -1.35
SEC18YBR080C GDH3P39708 457 aa6.64□□□□□ -1.35
SEC18YBR080C DAN4P47179 1161 aa6.64□□□□□ -1.35
SEC18YBR080C SRP1Q02821 542 aaKnown RBP6.64□□□□□ -1.35
SEC18YBR080C BSC2Q05611 235 aa6.64□□□□□ -1.35
SEC18YBR080C SPO75Q07798 868 aa6.64□□□□□ -1.35
SEC18YBR080C HSP82P02829 709 aaKnown RBP6.64□□□□□ -1.35
SEC18YBR080C PTP2P29461 750 aa6.64□□□□□ -1.35
SEC18YBR080C EMW1P42842 904 aaKnown RBP6.64□□□□□ -1.35
SEC18YBR080C BFA1P47113 574 aa6.64□□□□□ -1.35
SEC18YBR080C NPY1P53164 384 aa6.64□□□□□ -1.35
SEC18YBR080C UTP8P53276 713 aaKnown RBP6.64□□□□□ -1.35
SEC18YBR080C FAP7Q12055 197 aaPredicted RBP6.64□□□□□ -1.35
SEC18YBR080C OSH2Q12451 1283 aa6.64□□□□□ -1.35
SEC18YBR080C MDM12Q92328 271 aa6.64□□□□□ -1.35
SEC18YBR080C MCM5P29496 775 aaKnown RBP6.63□□□□□ -1.35
SEC18YBR080C HXT5P38695 592 aa6.63□□□□□ -1.35
SEC18YBR080C CIC1P38779 376 aaKnown RBP6.63□□□□□ -1.35
SEC18YBR080C DOT6P40059 670 aaKnown RBP6.63□□□□□ -1.35
SEC18YBR080C IRR1P40541 1150 aa6.63□□□□□ -1.35
SEC18YBR080C UBP10P53874 792 aaPredicted RBP6.63□□□□□ -1.35
SEC18YBR080C PRP3Q03338 469 aaPredicted RBP6.63□□□□□ -1.35
SEC18YBR080C SHE9Q04172 456 aa6.63□□□□□ -1.35
SEC18YBR080C RTT10Q08924 1013 aa6.63□□□□□ -1.35
SEC18YBR080C GFD2P25370 566 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C AGP1P25376 633 aa6.62□□□□□ -1.35
SEC18YBR080C SLX5P32828 619 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C PRP40P33203 583 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C NPL4P33755 580 aa6.62□□□□□ -1.35
SEC18YBR080C VBA5P36172 582 aa6.62□□□□□ -1.35
SEC18YBR080C JNM1P36224 373 aa6.62□□□□□ -1.35
SEC18YBR080C SUT1P53032 299 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C CIA1Q05583 330 aa6.62□□□□□ -1.35
SEC18YBR080C EAF1Q06337 982 aa6.62□□□□□ -1.35
SEC18YBR080C INP54Q08227 384 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C NUP120P35729 1037 aa6.62□□□□□ -1.35
SEC18YBR080C RXT2P38255 430 aa6.62□□□□□ -1.35
SEC18YBR080C VTC2P43585 828 aa6.62□□□□□ -1.35
SEC18YBR080C HEH2Q03281 663 aa6.62□□□□□ -1.35
SEC18YBR080C MTQ2Q03920 221 aaPredicted RBP6.62□□□□□ -1.35
SEC18YBR080C ISR1Q06098 443 aaKnown RBP6.62□□□□□ -1.35
SEC18YBR080C YLR352WQ06479 807 aa6.62□□□□□ -1.35
SEC18YBR080C PSR2Q07949 397 aa6.62□□□□□ -1.35
SEC18YBR080C KCC4P25389 1037 aa6.61□□□□□ -1.35
SEC18YBR080C BAP2P38084 609 aa6.61□□□□□ -1.35
SEC18YBR080C VPS8P39702 1274 aa6.61□□□□□ -1.35
SEC18YBR080C YDR286CQ05530 114 aa6.61□□□□□ -1.35
SEC18YBR080C YPR097WQ06839 1073 aa6.61□□□□□ -1.35
SEC18YBR080C YPL191CQ08930 360 aa6.61□□□□□ -1.35
SEC18YBR080C MSS18P08593 268 aa6.61□□□□□ -1.35
SEC18YBR080C KRR1P25586 316 aaPredicted RBP6.61□□□□□ -1.35
SEC18YBR080C PPH3P32345 308 aa6.61□□□□□ -1.35
SEC18YBR080C TYS1P36421 394 aaKnown RBP6.61□□□□□ -1.35
SEC18YBR080C BUL2Q03758 920 aaKnown RBP6.61□□□□□ -1.35
SEC18YBR080C VPH1P32563 840 aaKnown RBP6.6□□□□□ -1.35
SEC18YBR080C ABD1P32783 436 aaPredicted RBP6.6□□□□□ -1.35
SEC18YBR080C DCW1P36091 449 aa6.6□□□□□ -1.35
SEC18YBR080C HXT13P39924 564 aa6.6□□□□□ -1.35
SEC18YBR080C RPA14P50106 137 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms