RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 CLCN1P35523 988 aa12.06□□□□□ -0.48
PAX6-273ENST00000640610 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
PAX6-273ENST00000640610 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
PAX6-273ENST00000640610 PROSER2Q86WR7 435 aaPredicted RBP12.05□□□□□ -0.48
PAX6-273ENST00000640610 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
PAX6-273ENST00000640610 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
PAX6-273ENST00000640610 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
PAX6-273ENST00000640610 HDGFL2Q7Z4V5 671 aaPredicted RBP12.05□□□□□ -0.48
PAX6-273ENST00000640610 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
PAX6-273ENST00000640610 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
PAX6-273ENST00000640610 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
PAX6-273ENST00000640610 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
PAX6-273ENST00000640610 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
PAX6-273ENST00000640610 ATP7BP35670 1465 aa12.04□□□□□ -0.48
PAX6-273ENST00000640610 SEC24BO95487 1268 aa12.04□□□□□ -0.48
PAX6-273ENST00000640610 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
PAX6-273ENST00000640610 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
PAX6-273ENST00000640610 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
PAX6-273ENST00000640610 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
PAX6-273ENST00000640610 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
PAX6-273ENST00000640610 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
PAX6-273ENST00000640610 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
PAX6-273ENST00000640610 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
PAX6-273ENST00000640610 RIPK4P57078 832 aa12.03□□□□□ -0.48
PAX6-273ENST00000640610 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
PAX6-273ENST00000640610 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
PAX6-273ENST00000640610 FSD2A1L4K1 749 aa12.02□□□□□ -0.48
PAX6-273ENST00000640610 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.48
PAX6-273ENST00000640610 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.48
PAX6-273ENST00000640610 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
PAX6-273ENST00000640610 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
PAX6-273ENST00000640610 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
PAX6-273ENST00000640610 HSP90AA2PQ14568 343 aaPredicted RBP12.02□□□□□ -0.49
PAX6-273ENST00000640610 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.49
PAX6-273ENST00000640610 SMC4Q9NTJ3 1288 aa12.02□□□□□ -0.49
PAX6-273ENST00000640610 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 HMOX1P09601 288 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 XRCC6P12956 609 aaKnown RBP eCLIP12.01□□□□□ -0.49
PAX6-273ENST00000640610 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 ANKRD26Q9UPS8 1709 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 NME9Q86XW9 330 aa12.01□□□□□ -0.49
PAX6-273ENST00000640610 TRIM27P14373 513 aa12□□□□□ -0.49
PAX6-273ENST00000640610 MVPQ14764 893 aaKnown RBP12□□□□□ -0.49
PAX6-273ENST00000640610 THUMPD2Q9BTF0 503 aaKnown RBP12□□□□□ -0.49
PAX6-273ENST00000640610 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
PAX6-273ENST00000640610 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
PAX6-273ENST00000640610 AKAP12Q02952 1782 aa12□□□□□ -0.49
PAX6-273ENST00000640610 PRKAR2BP31323 418 aa12□□□□□ -0.49
PAX6-273ENST00000640610 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
PAX6-273ENST00000640610 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
PAX6-273ENST00000640610 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
PAX6-273ENST00000640610 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
PAX6-273ENST00000640610 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
PAX6-273ENST00000640610 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
PAX6-273ENST00000640610 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
PAX6-273ENST00000640610 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 AAMPQ13685 434 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 TBC1D32Q96NH3 1257 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 C19orf44Q9H6X5 657 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
PAX6-273ENST00000640610 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
PAX6-273ENST00000640610 MON2Q7Z3U7 1717 aa11.98□□□□□ -0.49
PAX6-273ENST00000640610 MCM4P33991 863 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 MRE11P49959 708 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 NCOA3Q9Y6Q9 1424 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
PAX6-273ENST00000640610 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
PAX6-273ENST00000640610 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
PAX6-273ENST00000640610 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
PAX6-273ENST00000640610 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
PAX6-273ENST00000640610 ACEP12821 1306 aa11.96□□□□□ -0.49
PAX6-273ENST00000640610 TMEM57Q8N5G2 664 aa11.96□□□□□ -0.49
PAX6-273ENST00000640610 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
PAX6-273ENST00000640610 FCHSD2O94868 740 aa11.95□□□□□ -0.5
PAX6-273ENST00000640610 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
PAX6-273ENST00000640610 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 CHMP5Q9NZZ3 219 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
PAX6-273ENST00000640610 ELL2O00472 640 aaPredicted RBP11.94□□□□□ -0.5
PAX6-273ENST00000640610 ATF3P18847 181 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 IL13P35225 146 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 IL16Q14005 1332 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
PAX6-273ENST00000640610 CT47B1P0C2W7 299 aaPredicted RBP11.93□□□□□ -0.5
PAX6-273ENST00000640610 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
PAX6-273ENST00000640610 DCCP43146 1447 aa11.93□□□□□ -0.5
PAX6-273ENST00000640610 MSH6P52701 1360 aa11.93□□□□□ -0.5
PAX6-273ENST00000640610 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
PAX6-273ENST00000640610 ARXQ96QS3 562 aa11.93□□□□□ -0.5
PAX6-273ENST00000640610 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
PAX6-273ENST00000640610 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
PAX6-273ENST00000640610 NGDNQ8NEJ9 315 aaKnown RBP11.93□□□□□ -0.5
PAX6-273ENST00000640610 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms