RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ARXQ96QS3 562 aa20.05■□□□□ 0.8
HLA-C-210ENST00000640219 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
HLA-C-210ENST00000640219 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
HLA-C-210ENST00000640219 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
HLA-C-210ENST00000640219 CCDC61Q9Y6R9 512 aa20.04■□□□□ 0.8
HLA-C-210ENST00000640219 PLEKHG3A1L390 1219 aa20.03■□□□□ 0.8
HLA-C-210ENST00000640219 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
HLA-C-210ENST00000640219 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
HLA-C-210ENST00000640219 GPR162Q16538 588 aa20.02■□□□□ 0.8
HLA-C-210ENST00000640219 TOM1L2Q6ZVM7 507 aa20.02■□□□□ 0.8
HLA-C-210ENST00000640219 BCL9O00512 1426 aa20.01■□□□□ 0.79
HLA-C-210ENST00000640219 MAP3K5Q99683 1374 aa20■□□□□ 0.79
HLA-C-210ENST00000640219 AATKQ6ZMQ8 1374 aa19.99■□□□□ 0.79
HLA-C-210ENST00000640219 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
HLA-C-210ENST00000640219 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
HLA-C-210ENST00000640219 CDCA7Q9BWT1 371 aaPredicted RBP19.98■□□□□ 0.79
HLA-C-210ENST00000640219 CEP350Q5VT06 3117 aa19.97■□□□□ 0.79
HLA-C-210ENST00000640219 ARHGEF28Q8N1W1 1705 aaKnown RBP19.97■□□□□ 0.79
HLA-C-210ENST00000640219 WDR17Q8IZU2 1322 aa19.95■□□□□ 0.78
HLA-C-210ENST00000640219 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
HLA-C-210ENST00000640219 NLRP6P59044 892 aa19.93■□□□□ 0.78
HLA-C-210ENST00000640219 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
HLA-C-210ENST00000640219 EXOC5O00471 708 aa19.92■□□□□ 0.78
HLA-C-210ENST00000640219 KLHL34Q8N239 644 aa19.92■□□□□ 0.78
HLA-C-210ENST00000640219 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
HLA-C-210ENST00000640219 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
HLA-C-210ENST00000640219 WNK3Q9BYP7 1800 aa19.92■□□□□ 0.78
HLA-C-210ENST00000640219 BRD4O60885 1362 aaPredicted RBP19.9■□□□□ 0.78
HLA-C-210ENST00000640219 PPIP5K1Q6PFW1 1433 aa19.9■□□□□ 0.78
HLA-C-210ENST00000640219 CSB-PGBD3P0DP91 1061 aa19.89■□□□□ 0.77
HLA-C-210ENST00000640219 CARD10Q9BWT7 1032 aa19.89■□□□□ 0.77
HLA-C-210ENST00000640219 SHANK3Q9BYB0 1731 aa19.88■□□□□ 0.77
HLA-C-210ENST00000640219 SLIT3O75094 1523 aa19.88■□□□□ 0.77
HLA-C-210ENST00000640219 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
HLA-C-210ENST00000640219 COL18A1P39060 1754 aa19.88■□□□□ 0.77
HLA-C-210ENST00000640219 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
HLA-C-210ENST00000640219 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
HLA-C-210ENST00000640219 POLD1P28340 1107 aa19.86■□□□□ 0.77
HLA-C-210ENST00000640219 PAPPAQ13219 1627 aa19.86■□□□□ 0.77
HLA-C-210ENST00000640219 SLC16A10Q8TF71 515 aa19.85■□□□□ 0.77
HLA-C-210ENST00000640219 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
HLA-C-210ENST00000640219 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
HLA-C-210ENST00000640219 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
HLA-C-210ENST00000640219 USP6P35125 1406 aa19.84■□□□□ 0.77
HLA-C-210ENST00000640219 ARHGEF25Q86VW2 580 aa19.83■□□□□ 0.77
HLA-C-210ENST00000640219 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
HLA-C-210ENST00000640219 TNS2Q63HR2 1409 aa19.83■□□□□ 0.76
HLA-C-210ENST00000640219 GRIN3BO60391 1043 aa19.82■□□□□ 0.76
HLA-C-210ENST00000640219 LRRC4BQ9NT99 713 aa19.82■□□□□ 0.76
HLA-C-210ENST00000640219 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
HLA-C-210ENST00000640219 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
HLA-C-210ENST00000640219 GOLGB1Q14789 3259 aaKnown RBP19.81■□□□□ 0.76
HLA-C-210ENST00000640219 KCNH5Q8NCM2 988 aa19.8■□□□□ 0.76
HLA-C-210ENST00000640219 AKT1S1Q96B36 256 aa19.8■□□□□ 0.76
HLA-C-210ENST00000640219 SOX12O15370 315 aa19.79■□□□□ 0.76
HLA-C-210ENST00000640219 RGPD5Q99666 1765 aa19.79■□□□□ 0.76
HLA-C-210ENST00000640219 YBX3P16989 372 aaKnown RBP eCLIP19.78■□□□□ 0.76
HLA-C-210ENST00000640219 HSPA6P17066 643 aa19.78■□□□□ 0.76
HLA-C-210ENST00000640219 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
HLA-C-210ENST00000640219 PIK3C2AO00443 1686 aa19.78■□□□□ 0.76
HLA-C-210ENST00000640219 ATP10DQ9P241 1426 aa19.77■□□□□ 0.76
HLA-C-210ENST00000640219 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.76
HLA-C-210ENST00000640219 GPBP1L1Q9HC44 474 aaPredicted RBP19.76■□□□□ 0.75
HLA-C-210ENST00000640219 BTAF1O14981 1849 aa19.76■□□□□ 0.75
HLA-C-210ENST00000640219 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
HLA-C-210ENST00000640219 ABCC6O95255 1503 aa19.75■□□□□ 0.75
HLA-C-210ENST00000640219 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
HLA-C-210ENST00000640219 COL24A1Q17RW2 1714 aa19.74■□□□□ 0.75
HLA-C-210ENST00000640219 SLC27A3Q5K4L6 730 aa19.74■□□□□ 0.75
HLA-C-210ENST00000640219 TFCP2L1Q9NZI6 479 aa19.74■□□□□ 0.75
HLA-C-210ENST00000640219 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
HLA-C-210ENST00000640219 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
HLA-C-210ENST00000640219 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
HLA-C-210ENST00000640219 IL2RBP14784 551 aa19.72■□□□□ 0.75
HLA-C-210ENST00000640219 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
HLA-C-210ENST00000640219 QRICH2Q9H0J4 1663 aa19.71■□□□□ 0.75
HLA-C-210ENST00000640219 ZNF526Q8TF50 670 aaPredicted RBP19.7■□□□□ 0.74
HLA-C-210ENST00000640219 KIAA1210Q9ULL0 1709 aa19.7■□□□□ 0.74
HLA-C-210ENST00000640219 SIN3AQ96ST3 1273 aa19.69■□□□□ 0.74
HLA-C-210ENST00000640219 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
HLA-C-210ENST00000640219 KAT6BQ8WYB5 2073 aa19.68■□□□□ 0.74
HLA-C-210ENST00000640219 NFAT5O94916 1531 aa19.68■□□□□ 0.74
HLA-C-210ENST00000640219 KCNQ4P56696 695 aa19.68■□□□□ 0.74
HLA-C-210ENST00000640219 TTC21AQ8NDW8 1320 aa19.68■□□□□ 0.74
HLA-C-210ENST00000640219 ERBB3P21860 1342 aa19.67■□□□□ 0.74
HLA-C-210ENST00000640219 MSH5O43196 834 aa19.66■□□□□ 0.74
HLA-C-210ENST00000640219 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
HLA-C-210ENST00000640219 DDX54Q8TDD1 881 aaKnown RBP19.64■□□□□ 0.73
HLA-C-210ENST00000640219 ADCY9O60503 1353 aa19.64■□□□□ 0.73
HLA-C-210ENST00000640219 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
HLA-C-210ENST00000640219 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
HLA-C-210ENST00000640219 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
HLA-C-210ENST00000640219 COL23A1Q86Y22 540 aaPredicted RBP19.62■□□□□ 0.73
HLA-C-210ENST00000640219 SYTL4Q96C24 671 aaPredicted RBP19.62■□□□□ 0.73
HLA-C-210ENST00000640219 ANKRD24Q8TF21 1146 aa19.61■□□□□ 0.73
HLA-C-210ENST00000640219 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
HLA-C-210ENST00000640219 PRIM1P49642 420 aaKnown RBP19.6■□□□□ 0.73
HLA-C-210ENST00000640219 KTN1Q86UP2 1357 aaKnown RBP19.58■□□□□ 0.73
HLA-C-210ENST00000640219 APLP1P51693 650 aa19.58■□□□□ 0.72
HLA-C-210ENST00000640219 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms