RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 GGCXP38435 758 aa13.25□□□□□ -0.29
CCDC7-212ENST00000639041 PLPP7Q8NBV4 271 aa13.25□□□□□ -0.29
CCDC7-212ENST00000639041 NCOA4Q13772 614 aa13.24□□□□□ -0.29
CCDC7-212ENST00000639041 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
CCDC7-212ENST00000639041 ATG7O95352 703 aa13.23□□□□□ -0.29
CCDC7-212ENST00000639041 TRIM32Q13049 653 aa13.23□□□□□ -0.29
CCDC7-212ENST00000639041 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
CCDC7-212ENST00000639041 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
CCDC7-212ENST00000639041 PLEKHM2Q8IWE5 1019 aa13.22□□□□□ -0.29
CCDC7-212ENST00000639041 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
CCDC7-212ENST00000639041 ZBTB7CA1YPR0 619 aa13.21□□□□□ -0.29
CCDC7-212ENST00000639041 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
CCDC7-212ENST00000639041 RAB15P59190 212 aa13.2□□□□□ -0.3
CCDC7-212ENST00000639041 SKOR1P84550 965 aa13.2□□□□□ -0.3
CCDC7-212ENST00000639041 C1QTNF2Q9BXJ5 285 aa13.19□□□□□ -0.3
CCDC7-212ENST00000639041 OXLD1Q5BKU9 147 aa13.18□□□□□ -0.3
CCDC7-212ENST00000639041 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
CCDC7-212ENST00000639041 DOLKQ9UPQ8 538 aa13.18□□□□□ -0.3
CCDC7-212ENST00000639041 RASA1P20936 1047 aa13.17□□□□□ -0.3
CCDC7-212ENST00000639041 PDE4CQ08493 712 aa13.17□□□□□ -0.3
CCDC7-212ENST00000639041 EML3Q32P44 896 aa13.17□□□□□ -0.3
CCDC7-212ENST00000639041 CRTC2Q53ET0 693 aaPredicted RBP13.17□□□□□ -0.3
CCDC7-212ENST00000639041 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
CCDC7-212ENST00000639041 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-212ENST00000639041 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
CCDC7-212ENST00000639041 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
CCDC7-212ENST00000639041 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
CCDC7-212ENST00000639041 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.3
CCDC7-212ENST00000639041 STK32AQ8WU08 396 aa13.15□□□□□ -0.3
CCDC7-212ENST00000639041 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.3
CCDC7-212ENST00000639041 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L21D6R901 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 ARID5BQ14865 1188 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 KCTD17Q8N5Z5 321 aa13.14□□□□□ -0.31
CCDC7-212ENST00000639041 TMEM88BA6NKF7 163 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 WNT7BP56706 349 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
CCDC7-212ENST00000639041 EHBP1Q8NDI1 1231 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 PCDHB11Q9Y5F2 797 aa13.13□□□□□ -0.31
CCDC7-212ENST00000639041 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
CCDC7-212ENST00000639041 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 VARSP26640 1264 aaKnown RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 RPIAP49247 311 aa13.12□□□□□ -0.31
CCDC7-212ENST00000639041 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
CCDC7-212ENST00000639041 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 KCTD15Q96SI1 283 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-212ENST00000639041 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
CCDC7-212ENST00000639041 FAM196BA6NMK8 535 aa13.11□□□□□ -0.31
CCDC7-212ENST00000639041 ESPNB1AK53 854 aa13.11□□□□□ -0.31
CCDC7-212ENST00000639041 PTK7Q13308 1070 aa13.11□□□□□ -0.31
CCDC7-212ENST00000639041 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
CCDC7-212ENST00000639041 CLDN10P78369 228 aa13.1□□□□□ -0.31
CCDC7-212ENST00000639041 ELOAQ14241 798 aaKnown RBP13.1□□□□□ -0.31
CCDC7-212ENST00000639041 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
CCDC7-212ENST00000639041 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
CCDC7-212ENST00000639041 DNAAF2Q9NVR5 837 aaKnown RBP13.08□□□□□ -0.32
CCDC7-212ENST00000639041 INTS6LQ5JSJ4 861 aaKnown RBP13.07□□□□□ -0.32
CCDC7-212ENST00000639041 TRIM50Q86XT4 487 aa13.07□□□□□ -0.32
CCDC7-212ENST00000639041 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
CCDC7-212ENST00000639041 GTF2IP78347 998 aa13.06□□□□□ -0.32
CCDC7-212ENST00000639041 DPYDQ12882 1025 aa13.06□□□□□ -0.32
CCDC7-212ENST00000639041 ANKMY2Q8IV38 441 aa13.06□□□□□ -0.32
CCDC7-212ENST00000639041 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
CCDC7-212ENST00000639041 TLL2Q9Y6L7 1015 aa13.06□□□□□ -0.32
CCDC7-212ENST00000639041 SLC19A1P41440 591 aa13.05□□□□□ -0.32
CCDC7-212ENST00000639041 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
CCDC7-212ENST00000639041 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
CCDC7-212ENST00000639041 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-212ENST00000639041 BRD1O95696 1058 aa13.04□□□□□ -0.32
CCDC7-212ENST00000639041 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
CCDC7-212ENST00000639041 PSME1Q06323 249 aa13.04□□□□□ -0.32
CCDC7-212ENST00000639041 USP4Q13107 963 aa13.04□□□□□ -0.32
CCDC7-212ENST00000639041 MAP4K5Q9Y4K4 846 aa13.03□□□□□ -0.32
CCDC7-212ENST00000639041 FSHRP23945 695 aa13.02□□□□□ -0.33
CCDC7-212ENST00000639041 SCTRP47872 440 aa13.02□□□□□ -0.33
CCDC7-212ENST00000639041 GZF1Q9H116 711 aaPredicted RBP13.02□□□□□ -0.33
CCDC7-212ENST00000639041 LARGE2Q8N3Y3 721 aa13.01□□□□□ -0.33
CCDC7-212ENST00000639041 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
CCDC7-212ENST00000639041 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
CCDC7-212ENST00000639041 PCDHGA11Q9Y5H2 935 aa13.01□□□□□ -0.33
CCDC7-212ENST00000639041 GRM5P41594 1212 aa13□□□□□ -0.33
CCDC7-212ENST00000639041 CCDC102BQ68D86 513 aa13□□□□□ -0.33
CCDC7-212ENST00000639041 TPCN2Q8NHX9 752 aa13□□□□□ -0.33
CCDC7-212ENST00000639041 SFI1A8K8P3 1242 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms