RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 PBXIP1Q96AQ6 731 aa11.68□□□□□ -0.54
FAM49B-230ENST00000639004 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
FAM49B-230ENST00000639004 CDV3Q9UKY7 258 aaKnown RBP11.68□□□□□ -0.54
FAM49B-230ENST00000639004 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
FAM49B-230ENST00000639004 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
FAM49B-230ENST00000639004 SPRYD7Q5W111 196 aa11.67□□□□□ -0.54
FAM49B-230ENST00000639004 ESPNB1AK53 854 aa11.66□□□□□ -0.54
FAM49B-230ENST00000639004 MAP4K5Q9Y4K4 846 aa11.66□□□□□ -0.54
FAM49B-230ENST00000639004 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
FAM49B-230ENST00000639004 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
FAM49B-230ENST00000639004 WNT7AO00755 349 aa11.64□□□□□ -0.55
FAM49B-230ENST00000639004 SIAH2O43255 324 aa11.64□□□□□ -0.55
FAM49B-230ENST00000639004 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
FAM49B-230ENST00000639004 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
FAM49B-230ENST00000639004 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
FAM49B-230ENST00000639004 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
FAM49B-230ENST00000639004 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
FAM49B-230ENST00000639004 DEPDC4Q8N2C3 294 aa11.63□□□□□ -0.55
FAM49B-230ENST00000639004 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
FAM49B-230ENST00000639004 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
FAM49B-230ENST00000639004 MAP7D1Q3KQU3 841 aa11.62□□□□□ -0.55
FAM49B-230ENST00000639004 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
FAM49B-230ENST00000639004 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
FAM49B-230ENST00000639004 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
FAM49B-230ENST00000639004 MRGPRX2Q96LB1 330 aa11.62□□□□□ -0.55
FAM49B-230ENST00000639004 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
FAM49B-230ENST00000639004 NCOA4Q13772 614 aa11.61□□□□□ -0.55
FAM49B-230ENST00000639004 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
FAM49B-230ENST00000639004 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
FAM49B-230ENST00000639004 KANK4Q5T7N3 995 aaPredicted RBP11.61□□□□□ -0.55
FAM49B-230ENST00000639004 MPNDQ8N594 471 aa11.61□□□□□ -0.55
FAM49B-230ENST00000639004 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
FAM49B-230ENST00000639004 INTS6LQ5JSJ4 861 aaKnown RBP11.6□□□□□ -0.55
FAM49B-230ENST00000639004 V9GY48 417 aaPredicted RBP11.6□□□□□ -0.55
FAM49B-230ENST00000639004 LZTS3O60299 673 aaPredicted RBP11.59□□□□□ -0.55
FAM49B-230ENST00000639004 VRTNQ9H8Y1 702 aa11.59□□□□□ -0.55
FAM49B-230ENST00000639004 ACIN1Q9UKV3 1341 aaKnown RBP11.59□□□□□ -0.55
FAM49B-230ENST00000639004 GRM5P41594 1212 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 RAB15P59190 212 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 EML3Q32P44 896 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
FAM49B-230ENST00000639004 PKD2L1Q9P0L9 805 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
FAM49B-230ENST00000639004 FSHRP23945 695 aa11.57□□□□□ -0.56
FAM49B-230ENST00000639004 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
FAM49B-230ENST00000639004 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
FAM49B-230ENST00000639004 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
FAM49B-230ENST00000639004 ATG7O95352 703 aa11.56□□□□□ -0.56
FAM49B-230ENST00000639004 ADH1CP00326 375 aa11.56□□□□□ -0.56
FAM49B-230ENST00000639004 FOXC1Q12948 553 aa11.56□□□□□ -0.56
FAM49B-230ENST00000639004 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
FAM49B-230ENST00000639004 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
FAM49B-230ENST00000639004 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
FAM49B-230ENST00000639004 GDF9O60383 454 aa11.52□□□□□ -0.57
FAM49B-230ENST00000639004 NR5A1Q13285 461 aa11.52□□□□□ -0.57
FAM49B-230ENST00000639004 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
FAM49B-230ENST00000639004 NR3C2P08235 984 aa11.51□□□□□ -0.57
FAM49B-230ENST00000639004 CRTC2Q53ET0 693 aaPredicted RBP11.51□□□□□ -0.57
FAM49B-230ENST00000639004 TMPRSS4Q9NRS4 437 aa11.51□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L21D6R901 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 RASA1P20936 1047 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 CLDN10P78369 228 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 DHX9Q08211 1270 aaKnown RBP11.5□□□□□ -0.57
FAM49B-230ENST00000639004 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 ELOAQ14241 798 aaKnown RBP11.5□□□□□ -0.57
FAM49B-230ENST00000639004 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 CCDC116Q8IYX3 515 aa11.5□□□□□ -0.57
FAM49B-230ENST00000639004 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
FAM49B-230ENST00000639004 CSB-PGBD3P0DP91 1061 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 SCTRP47872 440 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 USP4Q13107 963 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 PTK7Q13308 1070 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
FAM49B-230ENST00000639004 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 ZMIZ1Q9ULJ6 1067 aa11.49□□□□□ -0.57
FAM49B-230ENST00000639004 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
FAM49B-230ENST00000639004 GTF2IP78347 998 aa11.48□□□□□ -0.57
FAM49B-230ENST00000639004 PPP1R26Q5T8A7 1209 aaPredicted RBP11.48□□□□□ -0.57
FAM49B-230ENST00000639004 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
FAM49B-230ENST00000639004 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
FAM49B-230ENST00000639004 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
FAM49B-230ENST00000639004 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
FAM49B-230ENST00000639004 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms