RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 FLT4P35916 1363 aa28.41■■■□□ 2.14
SCARB2-212ENST00000638663 NEFMP07197 916 aa28.41■■■□□ 2.14
SCARB2-212ENST00000638663 XIRP1Q702N8 1843 aaKnown RBP28.4■■■□□ 2.14
SCARB2-212ENST00000638663 KRT28Q7Z3Y7 464 aa28.39■■■□□ 2.14
SCARB2-212ENST00000638663 RRP1P56182 461 aaKnown RBP28.39■■■□□ 2.13
SCARB2-212ENST00000638663 RIPK4P57078 832 aa28.38■■■□□ 2.13
SCARB2-212ENST00000638663 ERICH6BQ5W0A0 696 aa28.38■■■□□ 2.13
SCARB2-212ENST00000638663 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
SCARB2-212ENST00000638663 TRIM35Q9UPQ4 493 aa28.37■■■□□ 2.13
SCARB2-212ENST00000638663 LMOD2Q6P5Q4 547 aa28.35■■■□□ 2.13
SCARB2-212ENST00000638663 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
SCARB2-212ENST00000638663 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
SCARB2-212ENST00000638663 AEBP1Q8IUX7 1158 aa28.34■■■□□ 2.13
SCARB2-212ENST00000638663 HOXC9P31274 260 aa28.33■■■□□ 2.13
SCARB2-212ENST00000638663 KIF24Q5T7B8 1368 aa28.33■■■□□ 2.12
SCARB2-212ENST00000638663 NFE2L2Q16236 605 aa28.32■■■□□ 2.12
SCARB2-212ENST00000638663 DDX17Q92841 729 aaKnown RBP28.32■■■□□ 2.12
SCARB2-212ENST00000638663 NFAT5O94916 1531 aa28.31■■■□□ 2.12
SCARB2-212ENST00000638663 KCNH5Q8NCM2 988 aa28.31■■■□□ 2.12
SCARB2-212ENST00000638663 RGPD1P0DJD0 1748 aa28.31■■■□□ 2.12
SCARB2-212ENST00000638663 PLEKHG5O94827 1062 aa28.3■■■□□ 2.12
SCARB2-212ENST00000638663 ARHGEF10O15013 1369 aa28.28■■■□□ 2.12
SCARB2-212ENST00000638663 MYH16Q9H6N6 1097 aa28.28■■■□□ 2.12
SCARB2-212ENST00000638663 RTL1A6NKG5 1358 aa28.27■■■□□ 2.12
SCARB2-212ENST00000638663 LTN1O94822 1766 aa28.27■■■□□ 2.12
SCARB2-212ENST00000638663 PLIN1O60240 522 aa28.27■■■□□ 2.12
SCARB2-212ENST00000638663 PPP4R2Q9NY27 417 aa28.27■■■□□ 2.12
SCARB2-212ENST00000638663 NPHP3Q7Z494 1330 aa28.26■■■□□ 2.11
SCARB2-212ENST00000638663 ZBTB7CA1YPR0 619 aa28.26■■■□□ 2.11
SCARB2-212ENST00000638663 GCP02774 474 aa28.26■■■□□ 2.11
SCARB2-212ENST00000638663 EYA1Q99502 592 aa28.26■■■□□ 2.11
SCARB2-212ENST00000638663 SLIT3O75094 1523 aa28.25■■■□□ 2.11
SCARB2-212ENST00000638663 USP19O94966 1318 aa28.25■■■□□ 2.11
SCARB2-212ENST00000638663 IP6K1Q92551 441 aa28.24■■■□□ 2.11
SCARB2-212ENST00000638663 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
SCARB2-212ENST00000638663 IL16Q14005 1332 aa28.23■■■□□ 2.11
SCARB2-212ENST00000638663 ALS2Q96Q42 1657 aa28.23■■■□□ 2.11
SCARB2-212ENST00000638663 IGSF1Q8N6C5 1336 aa28.23■■■□□ 2.11
SCARB2-212ENST00000638663 BRINP3Q76B58 766 aa28.22■■■□□ 2.11
SCARB2-212ENST00000638663 TSR2Q969E8 191 aaKnown RBP28.22■■■□□ 2.11
SCARB2-212ENST00000638663 SLAIN2Q9P270 581 aa28.21■■■□□ 2.11
SCARB2-212ENST00000638663 FANCIQ9NVI1 1328 aa28.21■■■□□ 2.11
SCARB2-212ENST00000638663 KDRP35968 1356 aa28.2■■■□□ 2.1
SCARB2-212ENST00000638663 THUMPD2Q9BTF0 503 aaKnown RBP28.19■■■□□ 2.1
SCARB2-212ENST00000638663 PXDNQ92626 1479 aa28.19■■■□□ 2.1
SCARB2-212ENST00000638663 ARHGEF25Q86VW2 580 aa28.18■■■□□ 2.1
SCARB2-212ENST00000638663 DLG5Q8TDM6 1919 aa28.18■■■□□ 2.1
SCARB2-212ENST00000638663 BCAR3O75815 825 aa28.18■■■□□ 2.1
SCARB2-212ENST00000638663 LMOD3Q0VAK6 560 aa28.18■■■□□ 2.1
SCARB2-212ENST00000638663 TNS3Q68CZ2 1445 aa28.16■■■□□ 2.1
SCARB2-212ENST00000638663 PHRF1Q9P1Y6 1649 aaKnown RBP28.16■■■□□ 2.1
SCARB2-212ENST00000638663 EXOC6Q8TAG9 804 aa28.16■■■□□ 2.1
SCARB2-212ENST00000638663 MED1Q15648 1581 aaPredicted RBP28.15■■■□□ 2.1
SCARB2-212ENST00000638663 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.15■■■□□ 2.1
SCARB2-212ENST00000638663 FAM83GA6ND36 823 aa28.14■■■□□ 2.1
SCARB2-212ENST00000638663 B4GALNT3Q6L9W6 998 aa28.14■■■□□ 2.1
SCARB2-212ENST00000638663 CALD1Q05682 793 aaKnown RBP28.14■■■□□ 2.09
SCARB2-212ENST00000638663 LAS1LQ9Y4W2 734 aaKnown RBP28.14■■■□□ 2.09
SCARB2-212ENST00000638663 SPATA31A3Q5VYP0 1347 aa28.13■■■□□ 2.09
SCARB2-212ENST00000638663 EXOSC9Q06265 439 aaKnown RBP28.13■■■□□ 2.09
SCARB2-212ENST00000638663 C20orf194Q5TEA3 1177 aa28.13■■■□□ 2.09
SCARB2-212ENST00000638663 RARSP54136 660 aaKnown RBP28.12■■■□□ 2.09
SCARB2-212ENST00000638663 DCTN1Q14203 1278 aa28.12■■■□□ 2.09
SCARB2-212ENST00000638663 ZC3H6P61129 1189 aaKnown RBP28.11■■■□□ 2.09
SCARB2-212ENST00000638663 USHBP1Q8N6Y0 703 aa28.11■■■□□ 2.09
SCARB2-212ENST00000638663 MTHFSDQ2M296 383 aaKnown RBP28.1■■■□□ 2.09
SCARB2-212ENST00000638663 CABLES1Q8TDN4 633 aa28.09■■■□□ 2.09
SCARB2-212ENST00000638663 NBPF6Q5VWK0 638 aa28.08■■■□□ 2.09
SCARB2-212ENST00000638663 NBPF4Q96M43 638 aa28.08■■■□□ 2.09
SCARB2-212ENST00000638663 CRBNQ96SW2 442 aa28.08■■■□□ 2.09
SCARB2-212ENST00000638663 IFT57Q9NWB7 429 aa28.08■■■□□ 2.09
SCARB2-212ENST00000638663 GNAI1P63096 354 aa28.08■■■□□ 2.09
SCARB2-212ENST00000638663 CT47B1P0C2W7 299 aaPredicted RBP28.07■■■□□ 2.08
SCARB2-212ENST00000638663 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
SCARB2-212ENST00000638663 AXIN2Q9Y2T1 843 aa28.06■■■□□ 2.08
SCARB2-212ENST00000638663 ZNF853P0CG23 659 aa28.06■■■□□ 2.08
SCARB2-212ENST00000638663 LRRC59Q96AG4 307 aaKnown RBP28.06■■■□□ 2.08
SCARB2-212ENST00000638663 MCM10Q7L590 875 aa28.05■■■□□ 2.08
SCARB2-212ENST00000638663 GAS2L2Q8NHY3 880 aa28.05■■■□□ 2.08
SCARB2-212ENST00000638663 SOS2Q07890 1332 aaPredicted RBP28.05■■■□□ 2.08
SCARB2-212ENST00000638663 ANKRD24Q8TF21 1146 aa28.04■■■□□ 2.08
SCARB2-212ENST00000638663 CCDC136Q96JN2 1154 aa28.04■■■□□ 2.08
SCARB2-212ENST00000638663 BCL2L13Q9BXK5 485 aa28.04■■■□□ 2.08
SCARB2-212ENST00000638663 CFAP44Q96MT7 982 aa28.04■■■□□ 2.08
SCARB2-212ENST00000638663 MBIPQ9NS73 344 aa28.03■■■□□ 2.08
SCARB2-212ENST00000638663 CANXP27824 592 aaKnown RBP28.02■■■□□ 2.08
SCARB2-212ENST00000638663 RGPD2P0DJD1 1756 aa28.02■■■□□ 2.08
SCARB2-212ENST00000638663 FRAT1Q92837 279 aaPredicted RBP28.01■■■□□ 2.07
SCARB2-212ENST00000638663 CRYBG1Q9Y4K1 1723 aa28■■■□□ 2.07
SCARB2-212ENST00000638663 RTF1Q92541 710 aaKnown RBP28■■■□□ 2.07
SCARB2-212ENST00000638663 RGPD5Q99666 1765 aa27.98■■■□□ 2.07
SCARB2-212ENST00000638663 ERBB3P21860 1342 aa27.97■■■□□ 2.07
SCARB2-212ENST00000638663 SMC4Q9NTJ3 1288 aa27.96■■■□□ 2.07
SCARB2-212ENST00000638663 SSH1Q8WYL5 1049 aa27.96■■■□□ 2.07
SCARB2-212ENST00000638663 LTBP4Q8N2S1 1624 aa27.95■■■□□ 2.07
SCARB2-212ENST00000638663 CHRNA2Q15822 529 aa27.95■■■□□ 2.06
SCARB2-212ENST00000638663 NHSL1Q5SYE7 1610 aa27.95■■■□□ 2.06
SCARB2-212ENST00000638663 CRB1P82279 1406 aa27.95■■■□□ 2.06
SCARB2-212ENST00000638663 KIAA0232Q92628 1395 aa27.94■■■□□ 2.06
SCARB2-212ENST00000638663 GNAT3A8MTJ3 354 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms