RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 EVA1CP58658 441 aa11.14□□□□□ -0.63
PNKP-229ENST00000637897 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
PNKP-229ENST00000637897 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
PNKP-229ENST00000637897 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
PNKP-229ENST00000637897 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
PNKP-229ENST00000637897 RGPD1P0DJD0 1748 aa11.14□□□□□ -0.63
PNKP-229ENST00000637897 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
PNKP-229ENST00000637897 TRIM37O94972 964 aa11.13□□□□□ -0.63
PNKP-229ENST00000637897 EZH2Q15910 746 aaKnown RBP11.13□□□□□ -0.63
PNKP-229ENST00000637897 THRAP3Q9Y2W1 955 aaKnown RBP11.13□□□□□ -0.63
PNKP-229ENST00000637897 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
PNKP-229ENST00000637897 WDR17Q8IZU2 1322 aa11.12□□□□□ -0.63
PNKP-229ENST00000637897 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
PNKP-229ENST00000637897 EDC4Q6P2E9 1401 aaKnown RBP11.11□□□□□ -0.63
PNKP-229ENST00000637897 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
PNKP-229ENST00000637897 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
PNKP-229ENST00000637897 USP47Q96K76 1375 aa11.11□□□□□ -0.63
PNKP-229ENST00000637897 SBF2Q86WG5 1849 aa11.11□□□□□ -0.63
PNKP-229ENST00000637897 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
PNKP-229ENST00000637897 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
PNKP-229ENST00000637897 LTN1O94822 1766 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 RREB1Q92766 1687 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 BAG6P46379 1132 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 ABCC6O95255 1503 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 ERBB3P21860 1342 aa11.09□□□□□ -0.63
PNKP-229ENST00000637897 SF3B2Q13435 895 aaKnown RBP11.08□□□□□ -0.64
PNKP-229ENST00000637897 PROM2Q8N271 834 aa11.08□□□□□ -0.64
PNKP-229ENST00000637897 NUP188Q5SRE5 1749 aa11.08□□□□□ -0.64
PNKP-229ENST00000637897 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 APBA3O96018 575 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 BCL9O00512 1426 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 MYOM1P52179 1685 aa11.07□□□□□ -0.64
PNKP-229ENST00000637897 FYB1O15117 783 aa11.06□□□□□ -0.64
PNKP-229ENST00000637897 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
PNKP-229ENST00000637897 MAP3K19Q56UN5 1328 aa11.06□□□□□ -0.64
PNKP-229ENST00000637897 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
PNKP-229ENST00000637897 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
PNKP-229ENST00000637897 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
PNKP-229ENST00000637897 DDB1Q16531 1140 aa11.05□□□□□ -0.64
PNKP-229ENST00000637897 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
PNKP-229ENST00000637897 LRP5O75197 1615 aa11.05□□□□□ -0.64
PNKP-229ENST00000637897 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
PNKP-229ENST00000637897 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
PNKP-229ENST00000637897 KCNQ2O43526 872 aa11.04□□□□□ -0.64
PNKP-229ENST00000637897 ANKRD24Q8TF21 1146 aa11.04□□□□□ -0.64
PNKP-229ENST00000637897 IP6K1Q92551 441 aa11.04□□□□□ -0.64
PNKP-229ENST00000637897 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
PNKP-229ENST00000637897 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
PNKP-229ENST00000637897 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
PNKP-229ENST00000637897 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
PNKP-229ENST00000637897 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
PNKP-229ENST00000637897 ANO8Q9HCE9 1232 aaPredicted RBP11.03□□□□□ -0.64
PNKP-229ENST00000637897 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
PNKP-229ENST00000637897 HOXC9P31274 260 aa11.02□□□□□ -0.65
PNKP-229ENST00000637897 TMF1P82094 1093 aa11.02□□□□□ -0.65
PNKP-229ENST00000637897 RRS1Q15050 365 aaKnown RBP11.02□□□□□ -0.65
PNKP-229ENST00000637897 PDGFDQ9GZP0 370 aaPredicted RBP11.02□□□□□ -0.65
PNKP-229ENST00000637897 PARD3Q8TEW0 1356 aa11.02□□□□□ -0.65
PNKP-229ENST00000637897 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
PNKP-229ENST00000637897 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
PNKP-229ENST00000637897 PLSCR1O15162 318 aa11.01□□□□□ -0.65
PNKP-229ENST00000637897 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
PNKP-229ENST00000637897 NLRP2Q9NX02 1062 aa11.01□□□□□ -0.65
PNKP-229ENST00000637897 RGPD3A6NKT7 1758 aaPredicted RBP11□□□□□ -0.65
PNKP-229ENST00000637897 RGPD4Q7Z3J3 1758 aa11□□□□□ -0.65
PNKP-229ENST00000637897 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
PNKP-229ENST00000637897 COG3Q96JB2 828 aa11□□□□□ -0.65
PNKP-229ENST00000637897 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
PNKP-229ENST00000637897 MEGF6O75095 1541 aa10.99□□□□□ -0.65
PNKP-229ENST00000637897 EXOC5O00471 708 aa10.99□□□□□ -0.65
PNKP-229ENST00000637897 IL2RBP14784 551 aa10.99□□□□□ -0.65
PNKP-229ENST00000637897 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
PNKP-229ENST00000637897 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
PNKP-229ENST00000637897 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
PNKP-229ENST00000637897 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 HSPA5P11021 654 aaKnown RBP10.98□□□□□ -0.65
PNKP-229ENST00000637897 HSP90AB2PQ58FF8 381 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 NSD3Q9BZ95 1437 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
PNKP-229ENST00000637897 NSD2O96028 1365 aa10.97□□□□□ -0.65
PNKP-229ENST00000637897 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 TXNRD1Q16881 649 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
PNKP-229ENST00000637897 BTAF1O14981 1849 aa10.95□□□□□ -0.66
PNKP-229ENST00000637897 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
PNKP-229ENST00000637897 RTL1A6NKG5 1358 aa10.95□□□□□ -0.66
PNKP-229ENST00000637897 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
PNKP-229ENST00000637897 AMPHP49418 695 aa10.94□□□□□ -0.66
PNKP-229ENST00000637897 INSRP06213 1382 aa10.93□□□□□ -0.66
PNKP-229ENST00000637897 PTGER2P43116 358 aa10.92□□□□□ -0.66
PNKP-229ENST00000637897 ZNF827Q17R98 1081 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms