RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0
CHD2-229ENST00000637789 SIRT1Q96EB6 747 aa15.06■□□□□ 0
CHD2-229ENST00000637789 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ -0
CHD2-229ENST00000637789 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
CHD2-229ENST00000637789 COL5A2P05997 1499 aaPredicted RBP15.04■□□□□ -0
CHD2-229ENST00000637789 CRB1P82279 1406 aa15.04■□□□□ -0
CHD2-229ENST00000637789 TNS2Q63HR2 1409 aa15.04■□□□□ -0
CHD2-229ENST00000637789 ROCK1Q13464 1354 aa15.04■□□□□ -0
CHD2-229ENST00000637789 AKAP12Q02952 1782 aa15.03■□□□□ -0
CHD2-229ENST00000637789 HSPA1AP0DMV8 641 aaKnown RBP15.03■□□□□ -0
CHD2-229ENST00000637789 HSPA1BP0DMV9 641 aaKnown RBP15.03■□□□□ -0
CHD2-229ENST00000637789 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
CHD2-229ENST00000637789 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
CHD2-229ENST00000637789 NGDNQ8NEJ9 315 aaKnown RBP15.02■□□□□ -0
CHD2-229ENST00000637789 TULP4Q9NRJ4 1543 aa15.01□□□□□ -0.01
CHD2-229ENST00000637789 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
CHD2-229ENST00000637789 CPDO75976 1380 aa15□□□□□ -0.01
CHD2-229ENST00000637789 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
CHD2-229ENST00000637789 FAM161AQ3B820 660 aa15□□□□□ -0.01
CHD2-229ENST00000637789 AKT1S1Q96B36 256 aa15□□□□□ -0.01
CHD2-229ENST00000637789 PRAM1Q96QH2 718 aa15□□□□□ -0.01
CHD2-229ENST00000637789 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
CHD2-229ENST00000637789 WNK3Q9BYP7 1800 aa14.98□□□□□ -0.01
CHD2-229ENST00000637789 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
CHD2-229ENST00000637789 NHSQ6T4R5 1651 aa14.97□□□□□ -0.01
CHD2-229ENST00000637789 RBM46Q8TBY0 533 aaKnown RBP14.97□□□□□ -0.01
CHD2-229ENST00000637789 NMRK2Q9NPI5 230 aa14.96□□□□□ -0.01
CHD2-229ENST00000637789 PIK3C2GO75747 1445 aa14.95□□□□□ -0.02
CHD2-229ENST00000637789 TUBGCP6Q96RT7 1819 aa14.95□□□□□ -0.02
CHD2-229ENST00000637789 APLP2Q06481 763 aa14.94□□□□□ -0.02
CHD2-229ENST00000637789 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
CHD2-229ENST00000637789 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
CHD2-229ENST00000637789 ACSBG1Q96GR2 724 aa14.93□□□□□ -0.02
CHD2-229ENST00000637789 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
CHD2-229ENST00000637789 FSTL1Q12841 308 aa14.92□□□□□ -0.02
CHD2-229ENST00000637789 CDCA7Q9BWT1 371 aaPredicted RBP14.92□□□□□ -0.02
CHD2-229ENST00000637789 TFCP2L1Q9NZI6 479 aa14.92□□□□□ -0.02
CHD2-229ENST00000637789 POGKQ9P215 609 aa14.92□□□□□ -0.02
CHD2-229ENST00000637789 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
CHD2-229ENST00000637789 EIF3AQ14152 1382 aaKnown RBP14.92□□□□□ -0.02
CHD2-229ENST00000637789 BTAF1O14981 1849 aa14.91□□□□□ -0.02
CHD2-229ENST00000637789 USP19O94966 1318 aa14.91□□□□□ -0.02
CHD2-229ENST00000637789 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
CHD2-229ENST00000637789 EXOC5O00471 708 aa14.89□□□□□ -0.03
CHD2-229ENST00000637789 GCP02774 474 aa14.89□□□□□ -0.03
CHD2-229ENST00000637789 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
CHD2-229ENST00000637789 C16orf71Q8IYS4 520 aaPredicted RBP14.89□□□□□ -0.03
CHD2-229ENST00000637789 USP6P35125 1406 aa14.89□□□□□ -0.03
CHD2-229ENST00000637789 MSL1Q68DK7 614 aa14.88□□□□□ -0.03
CHD2-229ENST00000637789 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
CHD2-229ENST00000637789 WASLO00401 505 aaPredicted RBP14.87□□□□□ -0.03
CHD2-229ENST00000637789 ABTB2Q8N961 1025 aa14.87□□□□□ -0.03
CHD2-229ENST00000637789 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
CHD2-229ENST00000637789 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
CHD2-229ENST00000637789 IGSF1Q8N6C5 1336 aa14.87□□□□□ -0.03
CHD2-229ENST00000637789 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
CHD2-229ENST00000637789 MSH5O43196 834 aa14.85□□□□□ -0.03
CHD2-229ENST00000637789 SLC27A3Q5K4L6 730 aa14.85□□□□□ -0.03
CHD2-229ENST00000637789 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
CHD2-229ENST00000637789 KCNQ4P56696 695 aa14.84□□□□□ -0.03
CHD2-229ENST00000637789 MLLT1Q03111 559 aaPredicted RBP14.84□□□□□ -0.03
CHD2-229ENST00000637789 CFAP70Q5T0N1 1121 aa14.84□□□□□ -0.03
CHD2-229ENST00000637789 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
CHD2-229ENST00000637789 SPATA31E1Q6ZUB1 1445 aa14.83□□□□□ -0.03
CHD2-229ENST00000637789 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.03
CHD2-229ENST00000637789 ITGAEP38570 1179 aa14.83□□□□□ -0.04
CHD2-229ENST00000637789 COL23A1Q86Y22 540 aaPredicted RBP14.83□□□□□ -0.04
CHD2-229ENST00000637789 NLRP13Q86W25 1043 aa14.82□□□□□ -0.04
CHD2-229ENST00000637789 COL18A1P39060 1754 aa14.81□□□□□ -0.04
CHD2-229ENST00000637789 NUDT16Q96DE0 195 aaKnown RBP14.81□□□□□ -0.04
CHD2-229ENST00000637789 AXIN2Q9Y2T1 843 aa14.81□□□□□ -0.04
CHD2-229ENST00000637789 POLR3AO14802 1390 aaPredicted RBP14.81□□□□□ -0.04
CHD2-229ENST00000637789 CARD10Q9BWT7 1032 aa14.8□□□□□ -0.04
CHD2-229ENST00000637789 PRDM10Q9NQV6 1147 aa14.8□□□□□ -0.04
CHD2-229ENST00000637789 ACEP12821 1306 aa14.8□□□□□ -0.04
CHD2-229ENST00000637789 ABCC6O95255 1503 aa14.79□□□□□ -0.04
CHD2-229ENST00000637789 FOXN1O15353 648 aa14.78□□□□□ -0.04
CHD2-229ENST00000637789 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
CHD2-229ENST00000637789 ABHD8Q96I13 439 aa14.78□□□□□ -0.04
CHD2-229ENST00000637789 PIK3C2AO00443 1686 aa14.77□□□□□ -0.04
CHD2-229ENST00000637789 TRAK1Q9UPV9 953 aa14.77□□□□□ -0.05
CHD2-229ENST00000637789 C10orf71Q711Q0 1435 aa14.76□□□□□ -0.05
CHD2-229ENST00000637789 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
CHD2-229ENST00000637789 KCPQ6ZWJ8 1503 aa14.76□□□□□ -0.05
CHD2-229ENST00000637789 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
CHD2-229ENST00000637789 RGS19P49795 217 aa14.75□□□□□ -0.05
CHD2-229ENST00000637789 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
CHD2-229ENST00000637789 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
CHD2-229ENST00000637789 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
CHD2-229ENST00000637789 RGPD5Q99666 1765 aa14.73□□□□□ -0.05
CHD2-229ENST00000637789 SLIT3O75094 1523 aa14.73□□□□□ -0.05
CHD2-229ENST00000637789 LY75O60449 1722 aa14.72□□□□□ -0.05
CHD2-229ENST00000637789 KAT6BQ8WYB5 2073 aa14.72□□□□□ -0.05
CHD2-229ENST00000637789 ADGRB1O14514 1584 aa14.72□□□□□ -0.05
CHD2-229ENST00000637789 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
CHD2-229ENST00000637789 KDM2BQ8NHM5 1336 aa14.71□□□□□ -0.05
CHD2-229ENST00000637789 PXDNLA1KZ92 1463 aa14.71□□□□□ -0.05
CHD2-229ENST00000637789 ARHGAP27Q6ZUM4 889 aa14.71□□□□□ -0.05
CHD2-229ENST00000637789 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
CHD2-229ENST00000637789 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms