RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ZNHIT6Q9NWK9 470 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-238ENST00000637276 STK38Q15208 465 aa19.36■□□□□ 0.69
CACNA1A-238ENST00000637276 CABP2Q9NPB3 220 aa19.36■□□□□ 0.69
CACNA1A-238ENST00000637276 ERC2O15083 957 aa19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 PUF60Q9UHX1 559 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 MAP2K1Q02750 393 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 DZIP1Q86YF9 867 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 ABTB2Q8N961 1025 aa19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 CCDC102AQ96A19 550 aa19.35■□□□□ 0.69
CACNA1A-238ENST00000637276 CCDC178Q5BJE1 867 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 PPFIBP1Q86W92 1011 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 KIAA1328Q86T90 577 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 GIMAP7Q8NHV1 300 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 RAI14Q9P0K7 980 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 DPH6Q7L8W6 267 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 BBXQ8WY36 941 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 GGNBP2Q9H3C7 697 aa19.34■□□□□ 0.69
CACNA1A-238ENST00000637276 TOM1L2Q6ZVM7 507 aa19.33■□□□□ 0.69
CACNA1A-238ENST00000637276 CWC15Q9P013 229 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-238ENST00000637276 ME1P48163 572 aa19.33■□□□□ 0.68
CACNA1A-238ENST00000637276 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.68
CACNA1A-238ENST00000637276 ERCC4Q92889 916 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-238ENST00000637276 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
CACNA1A-238ENST00000637276 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
CACNA1A-238ENST00000637276 MAP3K9P80192 1104 aa19.31■□□□□ 0.68
CACNA1A-238ENST00000637276 TDO2P48775 406 aa19.31■□□□□ 0.68
CACNA1A-238ENST00000637276 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
CACNA1A-238ENST00000637276 ABCF2Q9UG63 623 aa19.31■□□□□ 0.68
CACNA1A-238ENST00000637276 CAMK4Q16566 473 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 CABP4P57796 275 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 MPHOSPH8Q99549 860 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 KIF20AO95235 890 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 CCDC158Q5M9N0 1113 aa19.3■□□□□ 0.68
CACNA1A-238ENST00000637276 ATP2B3Q16720 1220 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 KLHL10Q6JEL2 608 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 CCDC96Q2M329 555 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 DESP17661 470 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 TSPY26PQ9H489 355 aa19.29■□□□□ 0.68
CACNA1A-238ENST00000637276 NLRP6P59044 892 aa19.28■□□□□ 0.68
CACNA1A-238ENST00000637276 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
CACNA1A-238ENST00000637276 USP8P40818 1118 aa19.28■□□□□ 0.68
CACNA1A-238ENST00000637276 OTUD6BQ8N6M0 293 aa19.28■□□□□ 0.68
CACNA1A-238ENST00000637276 CIZ1Q9ULV3 898 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-238ENST00000637276 RGS22Q8NE09 1264 aa19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 PROCA1Q8NCQ7 364 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 FMN1Q68DA7 1419 aa19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 GSTTP1A0A1W2PQM5 241 aa19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 CRACR2BQ8N4Y2 399 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 NUCB2P80303 420 aa19.27■□□□□ 0.68
CACNA1A-238ENST00000637276 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.67
CACNA1A-238ENST00000637276 FERMT2Q96AC1 680 aa19.27■□□□□ 0.67
CACNA1A-238ENST00000637276 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 GUCY1B3Q02153 619 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 INCENPQ9NQS7 918 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 NEK4P51957 841 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 TRAK2O60296 914 aa19.26■□□□□ 0.67
CACNA1A-238ENST00000637276 ATP2C2O75185 946 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 IL27Q8NEV9 243 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 EIF5P55010 431 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 ADAMTS2O95450 1211 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 LMAN1P49257 510 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 ANKIB1Q9P2G1 1089 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 CCDC91Q7Z6B0 441 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 LRP2BPQ9P2M1 347 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 VAT1LQ9HCJ6 419 aa19.25■□□□□ 0.67
CACNA1A-238ENST00000637276 USP47Q96K76 1375 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 CTNNA2P26232 953 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 LARP6Q9BRS8 491 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 GNL3LQ9NVN8 582 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 CCDC144CPQ8IYA2 1237 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 EP400NLQ6ZTU2 488 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 PSMA5P28066 241 aa19.24■□□□□ 0.67
CACNA1A-238ENST00000637276 ZWINTO95229 277 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 GPATCH11Q8N954 259 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 RUNDC1Q96C34 613 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 STIM1Q13586 685 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 IDH1O75874 414 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 STAMBPO95630 424 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 POLR3DP05423 398 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 CSPG5O95196 566 aa19.23■□□□□ 0.67
CACNA1A-238ENST00000637276 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms