RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 USTQ9Y2C2 406 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 ATG7O95352 703 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
CRNDE-213ENST00000635991 CSB-PGBD3P0DP91 1061 aa8.96□□□□□ -0.98
CRNDE-213ENST00000635991 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
CRNDE-213ENST00000635991 FAM174AQ8TBP5 190 aa8.96□□□□□ -0.98
CRNDE-213ENST00000635991 VRTNQ9H8Y1 702 aa8.96□□□□□ -0.98
CRNDE-213ENST00000635991 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
CRNDE-213ENST00000635991 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
CRNDE-213ENST00000635991 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
CRNDE-213ENST00000635991 PLPP7Q8NBV4 271 aa8.95□□□□□ -0.98
CRNDE-213ENST00000635991 ELOAQ14241 798 aaKnown RBP8.94□□□□□ -0.98
CRNDE-213ENST00000635991 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-213ENST00000635991 MAP4K5Q9Y4K4 846 aa8.94□□□□□ -0.98
CRNDE-213ENST00000635991 CD2BP2O95400 341 aaKnown RBP8.93□□□□□ -0.98
CRNDE-213ENST00000635991 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 ESPNB1AK53 854 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 NCOA4Q13772 614 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 EML3Q32P44 896 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 KCTD17Q8N5Z5 321 aa8.92□□□□□ -0.98
CRNDE-213ENST00000635991 SKOR1P84550 965 aa8.91□□□□□ -0.98
CRNDE-213ENST00000635991 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
CRNDE-213ENST00000635991 GIGYF1O75420 1035 aaPredicted RBP8.9□□□□□ -0.98
CRNDE-213ENST00000635991 TRIM50Q86XT4 487 aa8.9□□□□□ -0.98
CRNDE-213ENST00000635991 TRIM52Q96A61 297 aa8.9□□□□□ -0.98
CRNDE-213ENST00000635991 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.98
CRNDE-213ENST00000635991 DEPDC4Q8N2C3 294 aa8.89□□□□□ -0.99
CRNDE-213ENST00000635991 MPNDQ8N594 471 aa8.89□□□□□ -0.99
CRNDE-213ENST00000635991 EHBP1Q8NDI1 1231 aa8.89□□□□□ -0.99
CRNDE-213ENST00000635991 SIRT1Q96EB6 747 aa8.89□□□□□ -0.99
CRNDE-213ENST00000635991 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
CRNDE-213ENST00000635991 CCDC85AQ96PX6 553 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-213ENST00000635991 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-213ENST00000635991 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
CRNDE-213ENST00000635991 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L15C9J2P7 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 PATL2C9JE40 543 aaKnown RBP8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L13C9JLJ4 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L12C9JPN9 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L11C9JVI0 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L21D6R901 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L18D6R9N7 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L22D6RA61 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L17D6RBQ6 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L19D6RCP7 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L20D6RJB6 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 USP17L24Q0WX57 530 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
CRNDE-213ENST00000635991 LARP1Q6PKG0 1096 aaKnown RBP8.87□□□□□ -0.99
CRNDE-213ENST00000635991 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
CRNDE-213ENST00000635991 CDK15Q96Q40 435 aa8.87□□□□□ -0.99
CRNDE-213ENST00000635991 RASA1P20936 1047 aa8.86□□□□□ -0.99
CRNDE-213ENST00000635991 LIAT1Q6ZQX7 453 aa8.86□□□□□ -0.99
CRNDE-213ENST00000635991 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
CRNDE-213ENST00000635991 TMEM88BA6NKF7 163 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 WNT7AO00755 349 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 USP4Q13107 963 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 PTK7Q13308 1070 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
CRNDE-213ENST00000635991 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 ZMIZ1Q9ULJ6 1067 aa8.85□□□□□ -0.99
CRNDE-213ENST00000635991 BRD1O95696 1058 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 SLC19A1P41440 591 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 DHX9Q08211 1270 aaKnown RBP8.84□□□□□ -0.99
CRNDE-213ENST00000635991 TRIM26Q12899 539 aaPredicted RBP8.84□□□□□ -0.99
CRNDE-213ENST00000635991 INTS6LQ5JSJ4 861 aaKnown RBP8.84□□□□□ -0.99
CRNDE-213ENST00000635991 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 EMID1Q96A84 441 aaPredicted RBP8.84□□□□□ -0.99
CRNDE-213ENST00000635991 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
CRNDE-213ENST00000635991 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
CRNDE-213ENST00000635991 SIX5Q8N196 739 aa8.83□□□□□ -1
CRNDE-213ENST00000635991 A0A0G2JS52 829 aa8.82□□□□□ -1
CRNDE-213ENST00000635991 SIAH2O43255 324 aa8.82□□□□□ -1
CRNDE-213ENST00000635991 MYCP01106 439 aaPredicted RBP8.82□□□□□ -1
CRNDE-213ENST00000635991 GTF2IP78347 998 aa8.82□□□□□ -1
CRNDE-213ENST00000635991 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
CRNDE-213ENST00000635991 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
CRNDE-213ENST00000635991 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
CRNDE-213ENST00000635991 ADH1CP00326 375 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 FSHRP23945 695 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 CLDN10P78369 228 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 KCNA1Q09470 495 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 NR5A1Q13285 461 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 SWI5Q1ZZU3 235 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 TMEM164Q5U3C3 297 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 SPRYD7Q5W111 196 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
CRNDE-213ENST00000635991 STK32AQ8WU08 396 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms