RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
TCF4-277ENST00000635990 NAP1L1P55209 391 aaKnown RBP7.67□□□□□ -1.18
TCF4-277ENST00000635990 SART3Q15020 963 aaKnown RBP7.67□□□□□ -1.18
TCF4-277ENST00000635990 IQGAP2Q13576 1575 aa7.67□□□□□ -1.18
TCF4-277ENST00000635990 AKNAQ7Z591 1439 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 TPM3P06753 285 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 METTL24Q5JXM2 366 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 BEGAINQ9BUH8 593 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 ROCK1Q13464 1354 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 TDO2P48775 406 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 API5Q9BZZ5 524 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 DZIP1LQ8IYY4 767 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 CCAR2Q8N163 923 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 DCTN1Q14203 1278 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 DZIP1Q86YF9 867 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 TRMT112Q9UI30 125 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 GNAT3A8MTJ3 354 aa7.66□□□□□ -1.18
TCF4-277ENST00000635990 IDH1O75874 414 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 TSR2Q969E8 191 aaKnown RBP7.66□□□□□ -1.18
TCF4-277ENST00000635990 PLB1Q6P1J6 1458 aa7.65□□□□□ -1.18
TCF4-277ENST00000635990 FGD6Q6ZV73 1430 aa7.65□□□□□ -1.18
TCF4-277ENST00000635990 VPS37CA5D8V6 355 aaPredicted RBP7.65□□□□□ -1.18
TCF4-277ENST00000635990 CAVIN4Q5BKX8 364 aa7.65□□□□□ -1.18
TCF4-277ENST00000635990 SYAP1Q96A49 352 aaPredicted RBP7.65□□□□□ -1.18
TCF4-277ENST00000635990 MYD88Q99836 296 aa7.65□□□□□ -1.18
TCF4-277ENST00000635990 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.65□□□□□ -1.182e-6■■■■■ 33.9
TCF4-277ENST00000635990 PHLDB1Q86UU1 1377 aa7.65□□□□□ -1.18
TCF4-277ENST00000635990 MCM10Q7L590 875 aa7.65□□□□□ -1.19
TCF4-277ENST00000635990 CLASRPQ8N2M8 674 aaKnown RBP7.65□□□□□ -1.19
TCF4-277ENST00000635990 XBP1P17861 261 aa7.65□□□□□ -1.19
TCF4-277ENST00000635990 DDX17Q92841 729 aaKnown RBP7.65□□□□□ -1.19
TCF4-277ENST00000635990 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.19
TCF4-277ENST00000635990 CNTLNQ9NXG0 1405 aa7.65□□□□□ -1.19
TCF4-277ENST00000635990 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 PANK1Q8TE04 598 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 JARID2Q92833 1246 aaPredicted RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 FEZ1Q99689 392 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 NOP58Q9Y2X3 529 aaKnown RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 MINDY4BA8MYZ0 360 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 EAPPQ56P03 285 aaPredicted RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 PARP3Q9Y6F1 533 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 DDB1Q16531 1140 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 HSP90AB4PQ58FF6 505 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 NBPF6Q5VWK0 638 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 NBPF5PQ86XG9 351 aaPredicted RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 NBPF4Q96M43 638 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 ZNF608Q9ULD9 1512 aaPredicted RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 FAM98CQ17RN3 349 aaKnown RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 TWISTNBQ3B726 338 aaPredicted RBP7.64□□□□□ -1.19
TCF4-277ENST00000635990 FANCAO15360 1455 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 MYO1BO43795 1136 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 ZBTB3Q9H5J0 574 aa7.64□□□□□ -1.19
TCF4-277ENST00000635990 PLEKHH2Q8IVE3 1493 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 GOLGA6L19H0YKK7 550 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 STK3Q13188 491 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 PLS1Q14651 629 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 DDX19BQ9UMR2 479 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 RIMBP2O15034 1052 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 DDX46Q7L014 1031 aaKnown RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 CCDC61Q9Y6R9 512 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 CCDC69A6NI79 296 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 APBA3O96018 575 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 BICD2Q8TD16 824 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 SETDB2Q96T68 719 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 LRRC9Q6ZRR7 1453 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 HMGB2P26583 209 aaKnown RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 PIP4K2AP48426 406 aaPredicted RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 CEBPZQ03701 1054 aaKnown RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 NME9Q86XW9 330 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 DENND4BO75064 1496 aaPredicted RBP7.63□□□□□ -1.19
TCF4-277ENST00000635990 NINLQ9Y2I6 1382 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 CCER2I3L3R5 266 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 LIG1P18858 919 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 MKNK2Q9HBH9 465 aa7.63□□□□□ -1.19
TCF4-277ENST00000635990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.62□□□□□ -1.19
TCF4-277ENST00000635990 VEZTQ9HBM0 779 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 BTG4Q9NY30 223 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 USP21Q9UK80 565 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 NOB1Q9ULX3 412 aaKnown RBP7.62□□□□□ -1.19
TCF4-277ENST00000635990 BECN2A8MW95 431 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 TPM1P09493 284 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 IDI1Q13907 227 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 CCDC96Q2M329 555 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 MSL1Q68DK7 614 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 NUTM1Q86Y26 1132 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 NAIPQ13075 1403 aa7.62□□□□□ -1.19
TCF4-277ENST00000635990 SSBP05455 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
TCF4-277ENST00000635990 BCAR3O75815 825 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 NACAP1Q9BZK3 213 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 GNAI2P04899 355 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 AACSQ86V21 672 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 SOGA3Q5TF21 947 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 FBLN1P23142 703 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 HSP90AB2PQ58FF8 381 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 THUMPD2Q9BTF0 503 aaKnown RBP7.61□□□□□ -1.19
TCF4-277ENST00000635990 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
TCF4-277ENST00000635990 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms