RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 SKIDA1Q1XH10 827 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 MPNDQ8N594 471 aa11.65□□□□□ -0.55
SPTAN1-228ENST00000635853 MAPKBP1O60336 1514 aa11.65□□□□□ -0.55
SPTAN1-228ENST00000635853 MAP3K1Q13233 1512 aa11.65□□□□□ -0.55
SPTAN1-228ENST00000635853 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 FAM107BQ9H098 131 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 LRSAM1Q6UWE0 723 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 RASSF4Q9H2L5 321 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 CUX1P39880 1505 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
SPTAN1-228ENST00000635853 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 SSFA2P28290 1259 aa11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 MATR3P43243 847 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 RIPK4P57078 832 aa11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 TTLL5Q6EMB2 1281 aa11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
SPTAN1-228ENST00000635853 HSP90AB3PQ58FF7 597 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 RNF123Q5XPI4 1314 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 NEFHP12036 1026 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 FILIP1Q7Z7B0 1213 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 SLC26A8Q96RN1 970 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
SPTAN1-228ENST00000635853 TXLNAP40222 546 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 NAT10Q9H0A0 1025 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 ZNF500O60304 480 aaPredicted RBP11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 TNNT1P13805 278 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 FSD2A1L4K1 749 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 CCDC91Q7Z6B0 441 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 KIAA0754O94854 1291 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 CNNM1Q9NRU3 951 aa11.61□□□□□ -0.55
SPTAN1-228ENST00000635853 BCAR3O75815 825 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 FAM69CQ0P6D2 419 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 ERLIN1O75477 346 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 TTC31Q49AM3 519 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 PTPN14Q15678 1187 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 FSD1Q9BTV5 496 aa11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-228ENST00000635853 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 IVLP07476 585 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 DESP17661 470 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 CCDC183Q5T5S1 534 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 ZNF397Q8NF99 534 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 PPP1R9BQ96SB3 815 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 ADCY5O95622 1261 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 TDO2P48775 406 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 SEPT7Q16181 437 aaKnown RBP11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 ZHX3Q9H4I2 956 aa11.59□□□□□ -0.55
SPTAN1-228ENST00000635853 IGSF3O75054 1194 aa11.58□□□□□ -0.55
SPTAN1-228ENST00000635853 UBTFL1P0CB47 393 aaPredicted RBP11.58□□□□□ -0.55
SPTAN1-228ENST00000635853 TRIM21P19474 475 aaKnown RBP11.58□□□□□ -0.55
SPTAN1-228ENST00000635853 ATP2B1P20020 1258 aa11.58□□□□□ -0.55
SPTAN1-228ENST00000635853 POLR3GO15318 223 aaPredicted RBP11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 PSMA5P28066 241 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 ESCO1Q5FWF5 840 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 KIF18AQ8NI77 898 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 UBXN4Q92575 508 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 RAB3GAP1Q15042 981 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 GCC1Q96CN9 775 aa11.58□□□□□ -0.56
SPTAN1-228ENST00000635853 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 SNX21Q969T3 373 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 HMOX1P09601 288 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 CNTROBQ8N137 903 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
SPTAN1-228ENST00000635853 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 ERLIN2O94905 339 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 FILIP1LQ4L180 1135 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 MYCBPQ99417 103 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 GNAI1P63096 354 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 PROSER2Q86WR7 435 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms