RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	NWD1	Q149M9	1564 aa		19.55	■□□□□ 0.72
BBS1-225	ENST00000630659	WDR63	Q8IWG1	891 aa		19.55	■□□□□ 0.72
BBS1-225	ENST00000630659	MAPK8IP3	Q9UPT6	1336 aa		19.54	■□□□□ 0.72
BBS1-225	ENST00000630659	RRS1	Q15050	365 aa	Known RBP	19.54	■□□□□ 0.72
BBS1-225	ENST00000630659	CENPQ	Q7L2Z9	268 aa	Predicted RBP	19.54	■□□□□ 0.72
BBS1-225	ENST00000630659	FCHSD2	O94868	740 aa		19.53	■□□□□ 0.72
BBS1-225	ENST00000630659	RBM33	Q96EV2	1170 aa	Known RBP	19.53	■□□□□ 0.72
BBS1-225	ENST00000630659	USP31	Q70CQ4	1352 aa		19.53	■□□□□ 0.72
BBS1-225	ENST00000630659	IL13	P35225	146 aa		19.53	■□□□□ 0.72
BBS1-225	ENST00000630659	VIRMA	Q69YN4	1812 aa	Known RBP	19.51	■□□□□ 0.71
BBS1-225	ENST00000630659	TMPO	P42166	694 aa	Known RBP	19.51	■□□□□ 0.71
BBS1-225	ENST00000630659	PHF8	Q9UPP1	1060 aa		19.51	■□□□□ 0.71
BBS1-225	ENST00000630659	KDM2B	Q8NHM5	1336 aa		19.5	■□□□□ 0.71
BBS1-225	ENST00000630659	FRAT2	O75474	233 aa	Predicted RBP	19.5	■□□□□ 0.71
BBS1-225	ENST00000630659	C14orf37	Q86TY3	774 aa		19.49	■□□□□ 0.71
BBS1-225	ENST00000630659	LRRC7	Q96NW7	1537 aa		19.48	■□□□□ 0.71
BBS1-225	ENST00000630659	PROSER2	Q86WR7	435 aa	Predicted RBP	19.48	■□□□□ 0.71
BBS1-225	ENST00000630659	PIK3C2A	O00443	1686 aa		19.47	■□□□□ 0.71
BBS1-225	ENST00000630659	PRKAR2B	P31323	418 aa		19.47	■□□□□ 0.71
BBS1-225	ENST00000630659	PLIN1	O60240	522 aa		19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	HSP90AA2P	Q14568	343 aa	Predicted RBP	19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	TRIM35	Q9UPQ4	493 aa		19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	HSP90AA1	P07900	732 aa	Known RBP	19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	HMOX1	P09601	288 aa		19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	RIPK4	P57078	832 aa		19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	ZMYND15	Q9H091	742 aa		19.45	■□□□□ 0.7
BBS1-225	ENST00000630659	CLCN1	P35523	988 aa		19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	NLRP6	P59044	892 aa		19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	C8orf34	Q49A92	452 aa		19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	ESCO1	Q5FWF5	840 aa		19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	MYH16	Q9H6N6	1097 aa		19.44	■□□□□ 0.7
BBS1-225	ENST00000630659	KDM4F	A0A1W2PPD8	638 aa		19.43	■□□□□ 0.7
BBS1-225	ENST00000630659	PEAK1	Q9H792	1746 aa		19.43	■□□□□ 0.7
BBS1-225	ENST00000630659	EIF4A2	Q14240	407 aa	Known RBP	19.43	■□□□□ 0.7
BBS1-225	ENST00000630659	USP54	Q70EL1	1684 aa		19.43	■□□□□ 0.7
BBS1-225	ENST00000630659	SOX12	O15370	315 aa		19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	HSPA2	P54652	639 aa		19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	BECN1	Q14457	450 aa		19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	VSIG10	Q8N0Z9	540 aa		19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	CRBN	Q96SW2	442 aa		19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	RRAGD	Q9NQL2	400 aa	Predicted RBP	19.42	■□□□□ 0.7
BBS1-225	ENST00000630659	IL16	Q14005	1332 aa		19.41	■□□□□ 0.7
BBS1-225	ENST00000630659	MAP3K19	Q56UN5	1328 aa		19.41	■□□□□ 0.7
BBS1-225	ENST00000630659	ABTB2	Q8N961	1025 aa		19.41	■□□□□ 0.7
BBS1-225	ENST00000630659	SBNO1	A3KN83	1393 aa		19.41	■□□□□ 0.7
BBS1-225	ENST00000630659	NFE2L2	Q16236	605 aa		19.41	■□□□□ 0.7
BBS1-225	ENST00000630659	SLC4A3	P48751	1232 aa		19.4	■□□□□ 0.7
BBS1-225	ENST00000630659	HSP90AB2P	Q58FF8	381 aa		19.4	■□□□□ 0.7
BBS1-225	ENST00000630659	PHACTR3	Q96KR7	559 aa		19.4	■□□□□ 0.7
BBS1-225	ENST00000630659	C19orf44	Q9H6X5	657 aa		19.4	■□□□□ 0.7
BBS1-225	ENST00000630659	PSME1	Q06323	249 aa		19.39	■□□□□ 0.7
BBS1-225	ENST00000630659	MARF1	Q9Y4F3	1742 aa	Known RBP	19.39	■□□□□ 0.69
BBS1-225	ENST00000630659	FLT4	P35916	1363 aa		19.39	■□□□□ 0.69
BBS1-225	ENST00000630659	NUTM2G	Q5VZR2	741 aa		19.39	■□□□□ 0.69
BBS1-225	ENST00000630659	AMPH	P49418	695 aa		19.37	■□□□□ 0.69
BBS1-225	ENST00000630659	ORAI2	Q96SN7	254 aa		19.37	■□□□□ 0.69
BBS1-225	ENST00000630659	BCAR3	O75815	825 aa		19.37	■□□□□ 0.69
BBS1-225	ENST00000630659	NCOA3	Q9Y6Q9	1424 aa		19.37	■□□□□ 0.69
BBS1-225	ENST00000630659	NAP1L5	Q96NT1	182 aa	Predicted RBP	19.36	■□□□□ 0.69
BBS1-225	ENST00000630659	STRCP1	A6NGW2	1772 aa		19.36	■□□□□ 0.69
BBS1-225	ENST00000630659	KIF24	Q5T7B8	1368 aa		19.36	■□□□□ 0.69
BBS1-225	ENST00000630659	C20orf194	Q5TEA3	1177 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	SULT6B1	Q6IMI4	303 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	TMEM94	Q12767	1356 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	LMTK3	Q96Q04	1460 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	RGPD1	P0DJD0	1748 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	C1orf167	Q5SNV9	1468 aa		19.35	■□□□□ 0.69
BBS1-225	ENST00000630659	ARHGEF10	O15013	1369 aa		19.33	■□□□□ 0.69
BBS1-225	ENST00000630659	CT47B1	P0C2W7	299 aa	Predicted RBP	19.33	■□□□□ 0.69
BBS1-225	ENST00000630659	RARS	P54136	660 aa	Known RBP	19.33	■□□□□ 0.69
BBS1-225	ENST00000630659	AEBP1	Q8IUX7	1158 aa		19.33	■□□□□ 0.69
BBS1-225	ENST00000630659	ISY1	Q9ULR0	285 aa	Known RBP	19.33	■□□□□ 0.69
BBS1-225	ENST00000630659	CALD1	Q05682	793 aa	Known RBP	19.33	■□□□□ 0.68
BBS1-225	ENST00000630659	LMOD3	Q0VAK6	560 aa		19.33	■□□□□ 0.68
BBS1-225	ENST00000630659	TSR2	Q969E8	191 aa	Known RBP	19.33	■□□□□ 0.68
BBS1-225	ENST00000630659	KIF1A	Q12756	1690 aa		19.32	■□□□□ 0.68
BBS1-225	ENST00000630659	FOXO3	O43524	673 aa		19.32	■□□□□ 0.68
BBS1-225	ENST00000630659	ATF3	P18847	181 aa		19.32	■□□□□ 0.68
BBS1-225	ENST00000630659	DCC	P43146	1447 aa		19.32	■□□□□ 0.68
BBS1-225	ENST00000630659	GOLGA6L3	A6NEY3	463 aa		19.31	■□□□□ 0.68
BBS1-225	ENST00000630659	HOXC9	P31274	260 aa		19.31	■□□□□ 0.68
BBS1-225	ENST00000630659	EXOSC9	Q06265	439 aa	Known RBP	19.3	■□□□□ 0.68
BBS1-225	ENST00000630659	FSD2	A1L4K1	749 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	STRC	Q7RTU9	1775 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	RTL1	A6NKG5	1358 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	MST1R	Q04912	1400 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	DLG5	Q8TDM6	1919 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	KRT28	Q7Z3Y7	464 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	KCNH5	Q8NCM2	988 aa		19.29	■□□□□ 0.68
BBS1-225	ENST00000630659	PDE3A	Q14432	1141 aa		19.28	■□□□□ 0.68
BBS1-225	ENST00000630659	NFAT5	O94916	1531 aa		19.28	■□□□□ 0.68
BBS1-225	ENST00000630659	TPM2	P07951	284 aa		19.27	■□□□□ 0.68
BBS1-225	ENST00000630659	CANX	P27824	592 aa	Known RBP	19.27	■□□□□ 0.68
BBS1-225	ENST00000630659	XPC	Q01831	940 aa	Predicted RBP	19.27	■□□□□ 0.68
BBS1-225	ENST00000630659	EYA1	Q99502	592 aa		19.27	■□□□□ 0.68
BBS1-225	ENST00000630659	IGSF1	Q8N6C5	1336 aa		19.27	■□□□□ 0.68
BBS1-225	ENST00000630659	KDR	P35968	1356 aa		19.27	■□□□□ 0.67
BBS1-225	ENST00000630659	TRPM3	Q9HCF6	1732 aa	Predicted RBP	19.26	■□□□□ 0.67
BBS1-225	ENST00000630659	GNAI1	P63096	354 aa		19.26	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms