RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 HSP90AB2PQ58FF8 381 aa32.37■■■□□ 2.77
ACAA1-220ENST00000627515 CANXP27824 592 aaKnown RBP32.37■■■□□ 2.77
ACAA1-220ENST00000627515 PDE3AQ14432 1141 aa32.36■■■□□ 2.77
ACAA1-220ENST00000627515 PAK3O75914 559 aaPredicted RBP32.34■■■□□ 2.77
ACAA1-220ENST00000627515 ABTB2Q8N961 1025 aa32.34■■■□□ 2.77
ACAA1-220ENST00000627515 EXOSC9Q06265 439 aaKnown RBP32.33■■■□□ 2.77
ACAA1-220ENST00000627515 ESCO1Q5FWF5 840 aa32.33■■■□□ 2.77
ACAA1-220ENST00000627515 RBM19Q9Y4C8 960 aaKnown RBP32.33■■■□□ 2.77
ACAA1-220ENST00000627515 CALD1Q05682 793 aaKnown RBP32.32■■■□□ 2.76
ACAA1-220ENST00000627515 SULT6B1Q6IMI4 303 aa32.32■■■□□ 2.76
ACAA1-220ENST00000627515 AEBP1Q8IUX7 1158 aa32.31■■■□□ 2.76
ACAA1-220ENST00000627515 LMOD3Q0VAK6 560 aa32.31■■■□□ 2.76
ACAA1-220ENST00000627515 FRAT1Q92837 279 aaPredicted RBP32.31■■■□□ 2.76
ACAA1-220ENST00000627515 ARHGEF10O15013 1369 aa32.3■■■□□ 2.76
ACAA1-220ENST00000627515 NUTM2GQ5VZR2 741 aa32.3■■■□□ 2.76
ACAA1-220ENST00000627515 PROSER2Q86WR7 435 aaPredicted RBP32.3■■■□□ 2.76
ACAA1-220ENST00000627515 AMPHP49418 695 aa32.29■■■□□ 2.76
ACAA1-220ENST00000627515 KIF24Q5T7B8 1368 aa32.29■■■□□ 2.76
ACAA1-220ENST00000627515 BCL2L13Q9BXK5 485 aa32.29■■■□□ 2.76
ACAA1-220ENST00000627515 LTN1O94822 1766 aa32.27■■■□□ 2.76
ACAA1-220ENST00000627515 PSME1Q06323 249 aa32.26■■■□□ 2.75
ACAA1-220ENST00000627515 STRCP1A6NGW2 1772 aa32.25■■■□□ 2.75
ACAA1-220ENST00000627515 THUMPD2Q9BTF0 503 aaKnown RBP32.25■■■□□ 2.75
ACAA1-220ENST00000627515 PANK1Q8TE04 598 aa32.24■■■□□ 2.75
ACAA1-220ENST00000627515 KIF1AQ12756 1690 aa32.24■■■□□ 2.75
ACAA1-220ENST00000627515 IFT57Q9NWB7 429 aa32.23■■■□□ 2.75
ACAA1-220ENST00000627515 LAS1LQ9Y4W2 734 aaKnown RBP32.23■■■□□ 2.75
ACAA1-220ENST00000627515 GNAI1P63096 354 aa32.22■■■□□ 2.75
ACAA1-220ENST00000627515 KDM2BQ8NHM5 1336 aa32.21■■■□□ 2.75
ACAA1-220ENST00000627515 ORAI2Q96SN7 254 aa32.2■■■□□ 2.75
ACAA1-220ENST00000627515 SMC4Q9NTJ3 1288 aa32.2■■■□□ 2.75
ACAA1-220ENST00000627515 HOXC9P31274 260 aa32.2■■■□□ 2.74
ACAA1-220ENST00000627515 COG6Q9Y2V7 657 aa32.2■■■□□ 2.74
ACAA1-220ENST00000627515 KDRP35968 1356 aa32.2■■■□□ 2.74
ACAA1-220ENST00000627515 NFAT5O94916 1531 aa32.2■■■□□ 2.74
ACAA1-220ENST00000627515 C19orf44Q9H6X5 657 aa32.19■■■□□ 2.74
ACAA1-220ENST00000627515 RTL1A6NKG5 1358 aa32.19■■■□□ 2.74
ACAA1-220ENST00000627515 IGSF1Q8N6C5 1336 aa32.19■■■□□ 2.74
ACAA1-220ENST00000627515 CENPQQ7L2Z9 268 aaPredicted RBP32.18■■■□□ 2.74
ACAA1-220ENST00000627515 ZNF853P0CG23 659 aa32.18■■■□□ 2.74
ACAA1-220ENST00000627515 SSH1Q8WYL5 1049 aa32.18■■■□□ 2.74
ACAA1-220ENST00000627515 C1orf167Q5SNV9 1468 aa32.17■■■□□ 2.74
ACAA1-220ENST00000627515 TRPM3Q9HCF6 1732 aaPredicted RBP32.17■■■□□ 2.74
ACAA1-220ENST00000627515 FAM83GA6ND36 823 aa32.16■■■□□ 2.74
ACAA1-220ENST00000627515 ZKSCAN2Q63HK3 967 aa32.16■■■□□ 2.74
ACAA1-220ENST00000627515 CFAP44Q96MT7 982 aa32.15■■■□□ 2.74
ACAA1-220ENST00000627515 EYA1Q99502 592 aa32.15■■■□□ 2.74
ACAA1-220ENST00000627515 RLBP1P12271 317 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 TNNQ9UQP3 1299 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 FOXO3O43524 673 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 HSPA2P54652 639 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 ZNF428Q96B54 188 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 MBIPQ9NS73 344 aa32.14■■■□□ 2.74
ACAA1-220ENST00000627515 TMEM94Q12767 1356 aa32.13■■■□□ 2.73
ACAA1-220ENST00000627515 PHRF1Q9P1Y6 1649 aaKnown RBP32.13■■■□□ 2.73
ACAA1-220ENST00000627515 NCOA3Q9Y6Q9 1424 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 MS4A1P11836 297 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 ALDH1L2Q3SY69 923 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 CLUAP1Q96AJ1 413 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 DCCP43146 1447 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 AAMPQ13685 434 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 DCTN1Q14203 1278 aa32.12■■■□□ 2.73
ACAA1-220ENST00000627515 TCERG1O14776 1098 aaKnown RBP32.11■■■□□ 2.73
ACAA1-220ENST00000627515 KCNH5Q8NCM2 988 aa32.1■■■□□ 2.73
ACAA1-220ENST00000627515 KIF16BQ96L93 1317 aa32.1■■■□□ 2.73
ACAA1-220ENST00000627515 FTSJ3Q8IY81 847 aaKnown RBP32.09■■■□□ 2.73
ACAA1-220ENST00000627515 XPCQ01831 940 aaPredicted RBP32.08■■■□□ 2.73
ACAA1-220ENST00000627515 DZIP1LQ8IYY4 767 aaKnown RBP32.08■■■□□ 2.73
ACAA1-220ENST00000627515 SLIT3O75094 1523 aa32.08■■■□□ 2.73
ACAA1-220ENST00000627515 MST1RQ04912 1400 aa32.08■■■□□ 2.73
ACAA1-220ENST00000627515 ATF3P18847 181 aa32.08■■■□□ 2.73
ACAA1-220ENST00000627515 LMTK3Q96Q04 1460 aa32.06■■■□□ 2.72
ACAA1-220ENST00000627515 TRIM27P14373 513 aa32.06■■■□□ 2.72
ACAA1-220ENST00000627515 MVPQ14764 893 aaKnown RBP32.06■■■□□ 2.72
ACAA1-220ENST00000627515 IP6K1Q92551 441 aa32.06■■■□□ 2.72
ACAA1-220ENST00000627515 NOB1Q9ULX3 412 aaKnown RBP32.06■■■□□ 2.72
ACAA1-220ENST00000627515 KDM4FA0A1W2PPD8 638 aa32.05■■■□□ 2.72
ACAA1-220ENST00000627515 VAMP4O75379 141 aa32.05■■■□□ 2.72
ACAA1-220ENST00000627515 ATF7IPQ6VMQ6 1270 aa32.05■■■□□ 2.72
ACAA1-220ENST00000627515 STRCQ7RTU9 1775 aa32.05■■■□□ 2.72
ACAA1-220ENST00000627515 MTHFSDQ2M296 383 aaKnown RBP32.04■■■□□ 2.72
ACAA1-220ENST00000627515 MCM10Q7L590 875 aa32.03■■■□□ 2.72
ACAA1-220ENST00000627515 KRT28Q7Z3Y7 464 aa32.03■■■□□ 2.72
ACAA1-220ENST00000627515 LTV1Q96GA3 475 aaPredicted RBP32.03■■■□□ 2.72
ACAA1-220ENST00000627515 ALS2Q96Q42 1657 aa32.03■■■□□ 2.72
ACAA1-220ENST00000627515 IPO8O15397 1037 aaKnown RBP32.03■■■□□ 2.72
ACAA1-220ENST00000627515 BRPF1P55201 1214 aaPredicted RBP32.03■■■□□ 2.72
ACAA1-220ENST00000627515 TSPYL6Q8N831 410 aa32.03■■■□□ 2.72
ACAA1-220ENST00000627515 GAS2L2Q8NHY3 880 aa32.03■■■□□ 2.72
ACAA1-220ENST00000627515 XIRP1Q702N8 1843 aaKnown RBP32.01■■■□□ 2.71
ACAA1-220ENST00000627515 TWISTNBQ3B726 338 aaPredicted RBP32.01■■■□□ 2.71
ACAA1-220ENST00000627515 CRB1P82279 1406 aa31.99■■■□□ 2.71
ACAA1-220ENST00000627515 USP19O94966 1318 aa31.99■■■□□ 2.71
ACAA1-220ENST00000627515 RTF1Q92541 710 aaKnown RBP31.99■■■□□ 2.71
ACAA1-220ENST00000627515 CHL1O00533 1208 aa31.98■■■□□ 2.71
ACAA1-220ENST00000627515 GCP02774 474 aa31.98■■■□□ 2.71
ACAA1-220ENST00000627515 LMOD2Q6P5Q4 547 aa31.98■■■□□ 2.71
ACAA1-220ENST00000627515 C8orf58Q8NAV2 365 aa31.98■■■□□ 2.71
ACAA1-220ENST00000627515 RGPD2P0DJD1 1756 aa31.98■■■□□ 2.71
ACAA1-220ENST00000627515 LRRC37A3O60309 1634 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms