RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 FBLN1P23142 703 aa9.96□□□□□ -0.82
PTP4A1-206ENST00000627002 CCDC146Q8IYE0 955 aa9.96□□□□□ -0.82
PTP4A1-206ENST00000627002 SLAIN2Q9P270 581 aa9.96□□□□□ -0.82
PTP4A1-206ENST00000627002 SBNO1A3KN83 1393 aa9.96□□□□□ -0.82
PTP4A1-206ENST00000627002 FCHSD2O94868 740 aa9.95□□□□□ -0.82
PTP4A1-206ENST00000627002 IL13P35225 146 aa9.95□□□□□ -0.82
PTP4A1-206ENST00000627002 NUTM2GQ5VZR2 741 aa9.95□□□□□ -0.82
PTP4A1-206ENST00000627002 MAP3K19Q56UN5 1328 aa9.95□□□□□ -0.82
PTP4A1-206ENST00000627002 FLT4P35916 1363 aa9.95□□□□□ -0.82
PTP4A1-206ENST00000627002 XIRP1Q702N8 1843 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 RTL1A6NKG5 1358 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 APAF1O14727 1248 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 SOX12O15370 315 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 NEFMP07197 916 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 AMPHP49418 695 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
PTP4A1-206ENST00000627002 USP19O94966 1318 aa9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 MAPK8IP3Q9UPT6 1336 aa9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 TRPM3Q9HCF6 1732 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-206ENST00000627002 SLIT3O75094 1523 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 TNS3Q68CZ2 1445 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 ARHGEF10O15013 1369 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 PLEKHF1Q96S99 279 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 NFAT5O94916 1531 aa9.92□□□□□ -0.82
PTP4A1-206ENST00000627002 PXDNQ92626 1479 aa9.91□□□□□ -0.82
PTP4A1-206ENST00000627002 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
PTP4A1-206ENST00000627002 GCP02774 474 aa9.91□□□□□ -0.82
PTP4A1-206ENST00000627002 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
PTP4A1-206ENST00000627002 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
PTP4A1-206ENST00000627002 SOS2Q07890 1332 aaPredicted RBP9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 HOXC9P31274 260 aa9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 PRKAR2BP31323 418 aa9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 IP6K1Q92551 441 aa9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 MAP2P11137 1827 aaKnown RBP9.9□□□□□ -0.82
PTP4A1-206ENST00000627002 PEAK1Q9H792 1746 aa9.9□□□□□ -0.83
PTP4A1-206ENST00000627002 MARF1Q9Y4F3 1742 aaKnown RBP9.9□□□□□ -0.83
PTP4A1-206ENST00000627002 TMPOP42166 694 aaKnown RBP9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 ARHGEF25Q86VW2 580 aa9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 ALS2Q96Q42 1657 aa9.89□□□□□ -0.83
PTP4A1-206ENST00000627002 E9PSI1 815 aa9.88□□□□□ -0.83
PTP4A1-206ENST00000627002 NEFLP07196 543 aa9.88□□□□□ -0.83
PTP4A1-206ENST00000627002 HMOX1P09601 288 aa9.88□□□□□ -0.83
PTP4A1-206ENST00000627002 POTEAQ6S8J7 498 aa9.88□□□□□ -0.83
PTP4A1-206ENST00000627002 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
PTP4A1-206ENST00000627002 IGSF1Q8N6C5 1336 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 PHRF1Q9P1Y6 1649 aaKnown RBP9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 LMOD3Q0VAK6 560 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 SULT6B1Q6IMI4 303 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 RRP7AQ9Y3A4 280 aaKnown RBP9.87□□□□□ -0.83
PTP4A1-206ENST00000627002 RIPK4P57078 832 aa9.86□□□□□ -0.83
PTP4A1-206ENST00000627002 TRMT2AQ8IZ69 625 aaKnown RBP9.86□□□□□ -0.83
PTP4A1-206ENST00000627002 KDRP35968 1356 aa9.86□□□□□ -0.83
PTP4A1-206ENST00000627002 IL16Q14005 1332 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 CALD1Q05682 793 aaKnown RBP9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 EYA1Q99502 592 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 SUPT16HQ9Y5B9 1047 aaKnown RBP9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 ABCC6O95255 1503 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 CPDO75976 1380 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
PTP4A1-206ENST00000627002 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 PHACTR3Q96KR7 559 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 RCAN3Q9UKA8 241 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
PTP4A1-206ENST00000627002 AHDC1Q5TGY3 1603 aaPredicted RBP9.83□□□□□ -0.84
PTP4A1-206ENST00000627002 ZC3H6P61129 1189 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-206ENST00000627002 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
PTP4A1-206ENST00000627002 LRRC59Q96AG4 307 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-206ENST00000627002 LTV1Q96GA3 475 aaPredicted RBP9.83□□□□□ -0.84
PTP4A1-206ENST00000627002 HAP1P54257 671 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 MEX3CQ5U5Q3 659 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 ZNF772Q68DY9 489 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 JCADQ9P266 1359 aa9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 LTN1O94822 1766 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms