RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RRS1Q15050 365 aaKnown RBP14.15□□□□□ -0.14
VARS2-213ENST00000625423 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
VARS2-213ENST00000625423 ARHGAP45Q92619 1136 aa14.14□□□□□ -0.15
VARS2-213ENST00000625423 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
VARS2-213ENST00000625423 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
VARS2-213ENST00000625423 METP08581 1390 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
VARS2-213ENST00000625423 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
VARS2-213ENST00000625423 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 NUDT16Q96DE0 195 aaKnown RBP14.13□□□□□ -0.15
VARS2-213ENST00000625423 COG3Q96JB2 828 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 CHMP5Q9NZZ3 219 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 MCM4P33991 863 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 C8orf58Q8NAV2 365 aa14.13□□□□□ -0.15
VARS2-213ENST00000625423 GCC1Q96CN9 775 aa14.12□□□□□ -0.15
VARS2-213ENST00000625423 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
VARS2-213ENST00000625423 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
VARS2-213ENST00000625423 PIK3R4Q99570 1358 aa14.12□□□□□ -0.15
VARS2-213ENST00000625423 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
VARS2-213ENST00000625423 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
VARS2-213ENST00000625423 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
VARS2-213ENST00000625423 BMP2KLQ5H9B9 411 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 AATKQ6ZMQ8 1374 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
VARS2-213ENST00000625423 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
VARS2-213ENST00000625423 ABCC4O15439 1325 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
VARS2-213ENST00000625423 LMOD3Q0VAK6 560 aa14.1□□□□□ -0.15
VARS2-213ENST00000625423 CPS1P31327 1500 aa14.1□□□□□ -0.15
VARS2-213ENST00000625423 AGLP35573 1532 aa14.1□□□□□ -0.15
VARS2-213ENST00000625423 ARXQ96QS3 562 aa14.09□□□□□ -0.15
VARS2-213ENST00000625423 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
VARS2-213ENST00000625423 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
VARS2-213ENST00000625423 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.15
VARS2-213ENST00000625423 GZF1Q9H116 711 aaPredicted RBP14.08□□□□□ -0.16
VARS2-213ENST00000625423 API5Q9BZZ5 524 aaKnown RBP14.08□□□□□ -0.16
VARS2-213ENST00000625423 REREQ9P2R6 1566 aa14.07□□□□□ -0.16
VARS2-213ENST00000625423 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
VARS2-213ENST00000625423 L1TD1Q5T7N2 865 aaKnown RBP14.07□□□□□ -0.16
VARS2-213ENST00000625423 SNX21Q969T3 373 aa14.07□□□□□ -0.16
VARS2-213ENST00000625423 TBC1D9Q6ZT07 1266 aa14.07□□□□□ -0.16
VARS2-213ENST00000625423 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
VARS2-213ENST00000625423 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
VARS2-213ENST00000625423 KIF2CQ99661 725 aa14.06□□□□□ -0.16
VARS2-213ENST00000625423 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
VARS2-213ENST00000625423 TRAK2O60296 914 aa14.05□□□□□ -0.16
VARS2-213ENST00000625423 NCOA3Q9Y6Q9 1424 aa14.05□□□□□ -0.16
VARS2-213ENST00000625423 DDIT3P35638 169 aa14.05□□□□□ -0.16
VARS2-213ENST00000625423 KRT24Q2M2I5 525 aa14.05□□□□□ -0.16
VARS2-213ENST00000625423 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
VARS2-213ENST00000625423 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
VARS2-213ENST00000625423 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
VARS2-213ENST00000625423 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
VARS2-213ENST00000625423 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
VARS2-213ENST00000625423 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
VARS2-213ENST00000625423 DLG5Q8TDM6 1919 aa14.03□□□□□ -0.16
VARS2-213ENST00000625423 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
VARS2-213ENST00000625423 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
VARS2-213ENST00000625423 NUTM2FA1L443 756 aa14.03□□□□□ -0.16
VARS2-213ENST00000625423 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
VARS2-213ENST00000625423 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.16
VARS2-213ENST00000625423 MCM10Q7L590 875 aa14.02□□□□□ -0.16
VARS2-213ENST00000625423 XRCC6P12956 609 aaKnown RBP eCLIP14.02□□□□□ -0.17
VARS2-213ENST00000625423 GSPT1P15170 499 aaKnown RBP14.02□□□□□ -0.17
VARS2-213ENST00000625423 CEBPAP49715 358 aaPredicted RBP14.02□□□□□ -0.17
VARS2-213ENST00000625423 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
VARS2-213ENST00000625423 TECPR2O15040 1411 aa14.02□□□□□ -0.17
VARS2-213ENST00000625423 MON2Q7Z3U7 1717 aa14.02□□□□□ -0.17
VARS2-213ENST00000625423 FSD2A1L4K1 749 aa14.02□□□□□ -0.17
VARS2-213ENST00000625423 TTC21BQ7Z4L5 1316 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 ROBO2Q9HCK4 1378 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 CDC45O75419 566 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
VARS2-213ENST00000625423 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 KIF24Q5T7B8 1368 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 TNPO1Q92973 898 aaKnown RBP14.01□□□□□ -0.17
VARS2-213ENST00000625423 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 C3P01024 1663 aa14.01□□□□□ -0.17
VARS2-213ENST00000625423 CHL1O00533 1208 aa14□□□□□ -0.17
VARS2-213ENST00000625423 HSP90AA1P07900 732 aaKnown RBP14□□□□□ -0.17
VARS2-213ENST00000625423 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
VARS2-213ENST00000625423 ACEP12821 1306 aa14□□□□□ -0.17
VARS2-213ENST00000625423 SOX12O15370 315 aa14□□□□□ -0.17
VARS2-213ENST00000625423 EIF5BO60841 1220 aaKnown RBP14□□□□□ -0.17
VARS2-213ENST00000625423 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
VARS2-213ENST00000625423 K7ELQ4 463 aaPredicted RBP13.99□□□□□ -0.17
VARS2-213ENST00000625423 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
VARS2-213ENST00000625423 KNDC1Q76NI1 1749 aa13.99□□□□□ -0.17
VARS2-213ENST00000625423 ANKRD44Q8N8A2 993 aa13.99□□□□□ -0.17
VARS2-213ENST00000625423 PANK2Q9BZ23 570 aa13.99□□□□□ -0.17
VARS2-213ENST00000625423 AKAP12Q02952 1782 aa13.98□□□□□ -0.17
VARS2-213ENST00000625423 RGS12O14924 1447 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms