RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 U2AF1L5P0DN76 240 aaPredicted RBP22.78■■□□□ 1.24
PCF11-207ENST00000624931 U2AF1Q01081 240 aaKnown RBP eCLIP22.78■■□□□ 1.24
PCF11-207ENST00000624931 CENPQQ7L2Z9 268 aaPredicted RBP22.78■■□□□ 1.24
PCF11-207ENST00000624931 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
PCF11-207ENST00000624931 CRBNQ96SW2 442 aa22.78■■□□□ 1.24
PCF11-207ENST00000624931 MAP3K19Q56UN5 1328 aa22.77■■□□□ 1.24
PCF11-207ENST00000624931 ALS2Q96Q42 1657 aa22.77■■□□□ 1.24
PCF11-207ENST00000624931 BRINP3Q76B58 766 aa22.77■■□□□ 1.23
PCF11-207ENST00000624931 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
PCF11-207ENST00000624931 PXDNQ92626 1479 aa22.75■■□□□ 1.23
PCF11-207ENST00000624931 NFAT5O94916 1531 aa22.75■■□□□ 1.23
PCF11-207ENST00000624931 NGEFQ8N5V2 710 aa22.74■■□□□ 1.23
PCF11-207ENST00000624931 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
PCF11-207ENST00000624931 APAF1O14727 1248 aa22.74■■□□□ 1.23
PCF11-207ENST00000624931 NEFMP07197 916 aa22.74■■□□□ 1.23
PCF11-207ENST00000624931 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
PCF11-207ENST00000624931 KDM2BQ8NHM5 1336 aa22.73■■□□□ 1.23
PCF11-207ENST00000624931 LTN1O94822 1766 aa22.72■■□□□ 1.23
PCF11-207ENST00000624931 IL13P35225 146 aa22.72■■□□□ 1.23
PCF11-207ENST00000624931 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
PCF11-207ENST00000624931 HSP90AB2PQ58FF8 381 aa22.71■■□□□ 1.23
PCF11-207ENST00000624931 SLIT3O75094 1523 aa22.71■■□□□ 1.23
PCF11-207ENST00000624931 SBNO1A3KN83 1393 aa22.7■■□□□ 1.22
PCF11-207ENST00000624931 MED1Q15648 1581 aaPredicted RBP22.7■■□□□ 1.22
PCF11-207ENST00000624931 GOLGA2Q08379 1002 aa22.69■■□□□ 1.22
PCF11-207ENST00000624931 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
PCF11-207ENST00000624931 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
PCF11-207ENST00000624931 RRP7AQ9Y3A4 280 aaKnown RBP22.69■■□□□ 1.22
PCF11-207ENST00000624931 ZNF521Q96K83 1311 aa22.69■■□□□ 1.22
PCF11-207ENST00000624931 TNS3Q68CZ2 1445 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 FLT4P35916 1363 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 PLIN1O60240 522 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 HMOX1P09601 288 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 AMPHP49418 695 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 DUSP27Q5VZP5 1158 aa22.68■■□□□ 1.22
PCF11-207ENST00000624931 USP19O94966 1318 aa22.67■■□□□ 1.22
PCF11-207ENST00000624931 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
PCF11-207ENST00000624931 RGPD1P0DJD0 1748 aa22.66■■□□□ 1.22
PCF11-207ENST00000624931 FAM161AQ3B820 660 aa22.65■■□□□ 1.22
PCF11-207ENST00000624931 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
PCF11-207ENST00000624931 PLEKHF1Q96S99 279 aa22.65■■□□□ 1.22
PCF11-207ENST00000624931 NHSL1Q5SYE7 1610 aa22.65■■□□□ 1.22
PCF11-207ENST00000624931 PHRF1Q9P1Y6 1649 aaKnown RBP22.65■■□□□ 1.22
PCF11-207ENST00000624931 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
PCF11-207ENST00000624931 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
PCF11-207ENST00000624931 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
PCF11-207ENST00000624931 HOXC9P31274 260 aa22.64■■□□□ 1.21
PCF11-207ENST00000624931 NEUROD2Q15784 382 aa22.64■■□□□ 1.21
PCF11-207ENST00000624931 CRYBG1Q9Y4K1 1723 aa22.63■■□□□ 1.21
PCF11-207ENST00000624931 SPATA31A3Q5VYP0 1347 aa22.63■■□□□ 1.21
PCF11-207ENST00000624931 GCP02774 474 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 LAS1LQ9Y4W2 734 aaKnown RBP22.62■■□□□ 1.21
PCF11-207ENST00000624931 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 AEBP1Q8IUX7 1158 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 TRMT2AQ8IZ69 625 aaKnown RBP22.62■■□□□ 1.21
PCF11-207ENST00000624931 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
PCF11-207ENST00000624931 KCNH5Q8NCM2 988 aa22.61■■□□□ 1.21
PCF11-207ENST00000624931 SOS2Q07890 1332 aaPredicted RBP22.6■■□□□ 1.21
PCF11-207ENST00000624931 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
PCF11-207ENST00000624931 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
PCF11-207ENST00000624931 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
PCF11-207ENST00000624931 FCHSD2O94868 740 aa22.58■■□□□ 1.21
PCF11-207ENST00000624931 KIF24Q5T7B8 1368 aa22.58■■□□□ 1.2
PCF11-207ENST00000624931 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
PCF11-207ENST00000624931 SULT6B1Q6IMI4 303 aa22.57■■□□□ 1.2
PCF11-207ENST00000624931 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
PCF11-207ENST00000624931 SPINK5Q9NQ38 1064 aaPredicted RBP22.57■■□□□ 1.2
PCF11-207ENST00000624931 ARHGEF10O15013 1369 aa22.56■■□□□ 1.2
PCF11-207ENST00000624931 ZC3H6P61129 1189 aaKnown RBP22.56■■□□□ 1.2
PCF11-207ENST00000624931 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
PCF11-207ENST00000624931 IP6K1Q92551 441 aa22.56■■□□□ 1.2
PCF11-207ENST00000624931 E9PSI1 815 aa22.55■■□□□ 1.2
PCF11-207ENST00000624931 TMPOP42166 694 aaKnown RBP22.55■■□□□ 1.2
PCF11-207ENST00000624931 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
PCF11-207ENST00000624931 EYA1Q99502 592 aa22.54■■□□□ 1.2
PCF11-207ENST00000624931 RGPD5Q99666 1765 aa22.54■■□□□ 1.2
PCF11-207ENST00000624931 ABCA3Q99758 1704 aa22.54■■□□□ 1.2
PCF11-207ENST00000624931 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
PCF11-207ENST00000624931 AAMPQ13685 434 aa22.54■■□□□ 1.2
PCF11-207ENST00000624931 GSE1Q14687 1217 aa22.53■■□□□ 1.2
PCF11-207ENST00000624931 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
PCF11-207ENST00000624931 IGSF1Q8N6C5 1336 aa22.52■■□□□ 1.2
PCF11-207ENST00000624931 C8orf34Q49A92 452 aa22.52■■□□□ 1.2
PCF11-207ENST00000624931 USHBP1Q8N6Y0 703 aa22.51■■□□□ 1.19
PCF11-207ENST00000624931 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
PCF11-207ENST00000624931 AHDC1Q5TGY3 1603 aaPredicted RBP22.51■■□□□ 1.19
PCF11-207ENST00000624931 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 AXIN2Q9Y2T1 843 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 COL18A1P39060 1754 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 DLG5Q8TDM6 1919 aa22.5■■□□□ 1.19
PCF11-207ENST00000624931 RIPK4P57078 832 aa22.49■■□□□ 1.19
PCF11-207ENST00000624931 LRRC59Q96AG4 307 aaKnown RBP22.48■■□□□ 1.19
PCF11-207ENST00000624931 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
PCF11-207ENST00000624931 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
PCF11-207ENST00000624931 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
PCF11-207ENST00000624931 KDRP35968 1356 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms