RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
COL1A2-213ENST00000620463 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
COL1A2-213ENST00000620463 DUSP27Q5VZP5 1158 aa15.55■□□□□ 0.08
COL1A2-213ENST00000620463 SPATA32Q96LK8 384 aa15.55■□□□□ 0.08
COL1A2-213ENST00000620463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL1A2-213ENST00000620463 MYRIPQ8NFW9 859 aa15.54■□□□□ 0.08
COL1A2-213ENST00000620463 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
COL1A2-213ENST00000620463 SHTN1A0MZ66 631 aa15.54■□□□□ 0.08
COL1A2-213ENST00000620463 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
COL1A2-213ENST00000620463 NCOA2Q15596 1464 aa15.54■□□□□ 0.08
COL1A2-213ENST00000620463 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
COL1A2-213ENST00000620463 GNAI1P63096 354 aa15.54■□□□□ 0.08
COL1A2-213ENST00000620463 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
COL1A2-213ENST00000620463 UPF3BQ9BZI7 483 aaKnown RBP15.53■□□□□ 0.08
COL1A2-213ENST00000620463 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
COL1A2-213ENST00000620463 MTHFSP49914 203 aa15.53■□□□□ 0.08
COL1A2-213ENST00000620463 TRIM29Q14134 588 aa15.53■□□□□ 0.08
COL1A2-213ENST00000620463 CT47A1Q5JQC4 288 aaPredicted RBP15.53■□□□□ 0.08
COL1A2-213ENST00000620463 CLSTN1O94985 981 aa15.53■□□□□ 0.08
COL1A2-213ENST00000620463 GABPB1Q06547 395 aaPredicted RBP15.52■□□□□ 0.08
COL1A2-213ENST00000620463 CEP89Q96ST8 783 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 CFTRP13569 1480 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 PSMA5P28066 241 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 TSC1Q92574 1164 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 GBP3Q9H0R5 595 aa15.52■□□□□ 0.08
COL1A2-213ENST00000620463 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.07
COL1A2-213ENST00000620463 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.07
COL1A2-213ENST00000620463 FERMT3Q86UX7 667 aa15.52■□□□□ 0.07
COL1A2-213ENST00000620463 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.07
COL1A2-213ENST00000620463 DMTNQ08495 405 aa15.51■□□□□ 0.07
COL1A2-213ENST00000620463 CKAP2LQ8IYA6 745 aa15.51■□□□□ 0.07
COL1A2-213ENST00000620463 ZNF397Q8NF99 534 aaPredicted RBP15.51■□□□□ 0.07
COL1A2-213ENST00000620463 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
COL1A2-213ENST00000620463 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
COL1A2-213ENST00000620463 ME1P48163 572 aa15.51■□□□□ 0.07
COL1A2-213ENST00000620463 ZNF644Q9H582 1327 aaPredicted RBP15.51■□□□□ 0.07
COL1A2-213ENST00000620463 BRPF1P55201 1214 aaPredicted RBP15.51■□□□□ 0.07
COL1A2-213ENST00000620463 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
COL1A2-213ENST00000620463 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 NEMFO60524 1076 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
COL1A2-213ENST00000620463 CCDC186Q7Z3E2 898 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 WDR63Q8IWG1 891 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 RSPH14Q9UHP6 348 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 TTC31Q49AM3 519 aaPredicted RBP15.5■□□□□ 0.07
COL1A2-213ENST00000620463 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 SMARCE1Q969G3 411 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
COL1A2-213ENST00000620463 SNW1Q13573 536 aaKnown RBP15.49■□□□□ 0.07
COL1A2-213ENST00000620463 STK38Q15208 465 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
COL1A2-213ENST00000620463 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 TDO2P48775 406 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 TMX1Q9H3N1 280 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
COL1A2-213ENST00000620463 IVLP07476 585 aa15.48■□□□□ 0.07
COL1A2-213ENST00000620463 FAM69CQ0P6D2 419 aa15.48■□□□□ 0.07
COL1A2-213ENST00000620463 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
COL1A2-213ENST00000620463 GOLGA6L7A0A1B0GV03 622 aa15.48■□□□□ 0.07
COL1A2-213ENST00000620463 EVC2Q86UK5 1308 aa15.48■□□□□ 0.07
COL1A2-213ENST00000620463 NKTRP30414 1462 aaKnown RBP15.48■□□□□ 0.07
COL1A2-213ENST00000620463 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
COL1A2-213ENST00000620463 LRRFIP2Q9Y608 721 aaKnown RBP15.48■□□□□ 0.07
COL1A2-213ENST00000620463 DYDC1Q8WWB3 177 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
COL1A2-213ENST00000620463 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 GOLGA6L10A6NI86 522 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 CBFA2T2O43439 604 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 FILIP1LQ4L180 1135 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 GIMAP6Q6P9H5 292 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 TBC1D9Q6ZT07 1266 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 STK3Q13188 491 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
COL1A2-213ENST00000620463 PPFIBP1Q86W92 1011 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 SNX21Q969T3 373 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 RIOK3O14730 519 aaKnown RBP15.47■□□□□ 0.07
COL1A2-213ENST00000620463 ZSCAN12O43309 604 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 CFAP100Q494V2 611 aa15.47■□□□□ 0.07
COL1A2-213ENST00000620463 SLU7O95391 586 aaKnown RBP15.46■□□□□ 0.07
COL1A2-213ENST00000620463 GTF3C6Q969F1 213 aa15.46■□□□□ 0.07
COL1A2-213ENST00000620463 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
COL1A2-213ENST00000620463 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
COL1A2-213ENST00000620463 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
COL1A2-213ENST00000620463 ZNF165P49910 485 aa15.46■□□□□ 0.07
COL1A2-213ENST00000620463 ARHGAP29Q52LW3 1261 aa15.46■□□□□ 0.06
COL1A2-213ENST00000620463 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.06
COL1A2-213ENST00000620463 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.06
COL1A2-213ENST00000620463 CAPN2P17655 700 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 AKAP17AQ02040 695 aaKnown RBP15.45■□□□□ 0.06
COL1A2-213ENST00000620463 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 HMOX1P09601 288 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
COL1A2-213ENST00000620463 ARFGAP3Q9NP61 516 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 RNF187Q5TA31 235 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms