RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
SEM1-220ENST00000619259 VASH1Q7L8A9 365 aaPredicted RBP7.71□□□□□ -1.18
SEM1-220ENST00000619259 DEPDC4Q8N2C3 294 aa7.71□□□□□ -1.18
SEM1-220ENST00000619259 MAFBQ9Y5Q3 323 aaPredicted RBP7.71□□□□□ -1.18
SEM1-220ENST00000619259 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
SEM1-220ENST00000619259 PBXIP1Q96AQ6 731 aa7.7□□□□□ -1.18
SEM1-220ENST00000619259 C1QTNF2Q9BXJ5 285 aa7.7□□□□□ -1.18
SEM1-220ENST00000619259 CDV3Q9UKY7 258 aaKnown RBP7.7□□□□□ -1.18
SEM1-220ENST00000619259 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
SEM1-220ENST00000619259 FOXC1Q12948 553 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 PLPP7Q8NBV4 271 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 NFATC2IPQ8NCF5 419 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 EMID1Q96A84 441 aaPredicted RBP7.69□□□□□ -1.18
SEM1-220ENST00000619259 KCTD15Q96SI1 283 aaPredicted RBP7.69□□□□□ -1.18
SEM1-220ENST00000619259 PRKD2Q9BZL6 878 aa7.69□□□□□ -1.18
SEM1-220ENST00000619259 USP17L3A6NCW0 530 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 USP17L4A6NCW7 530 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 USP17L2Q6R6M4 530 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 USP17L1Q7RTZ2 530 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 TRMT44Q8IYL2 757 aaKnown RBP7.68□□□□□ -1.18
SEM1-220ENST00000619259 PHTF2Q8N3S3 785 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 DOLKQ9UPQ8 538 aa7.68□□□□□ -1.18
SEM1-220ENST00000619259 NCOA4Q13772 614 aa7.67□□□□□ -1.18
SEM1-220ENST00000619259 EML3Q32P44 896 aa7.67□□□□□ -1.18
SEM1-220ENST00000619259 TSGA10IPQ3SY00 556 aa7.67□□□□□ -1.18
SEM1-220ENST00000619259 MRGPRX2Q96LB1 330 aa7.67□□□□□ -1.18
SEM1-220ENST00000619259 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
SEM1-220ENST00000619259 MAP7D1Q3KQU3 841 aa7.66□□□□□ -1.18
SEM1-220ENST00000619259 ZNF598Q86UK7 904 aaKnown RBP7.66□□□□□ -1.18
SEM1-220ENST00000619259 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
SEM1-220ENST00000619259 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
SEM1-220ENST00000619259 MKRN1Q9UHC7 482 aaKnown RBP7.66□□□□□ -1.18
SEM1-220ENST00000619259 PCDHB11Q9Y5F2 797 aa7.66□□□□□ -1.18
SEM1-220ENST00000619259 WNT7AO00755 349 aa7.65□□□□□ -1.18
SEM1-220ENST00000619259 FSHRP23945 695 aa7.65□□□□□ -1.18
SEM1-220ENST00000619259 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
SEM1-220ENST00000619259 INTS6LQ5JSJ4 861 aaKnown RBP7.64□□□□□ -1.19
SEM1-220ENST00000619259 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
SEM1-220ENST00000619259 SEPT12Q8IYM1 358 aa7.64□□□□□ -1.19
SEM1-220ENST00000619259 MAP4K5Q9Y4K4 846 aa7.64□□□□□ -1.19
SEM1-220ENST00000619259 V9GY48 417 aaPredicted RBP7.64□□□□□ -1.19
SEM1-220ENST00000619259 ESPNB1AK53 854 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 LZTS3O60299 673 aaPredicted RBP7.63□□□□□ -1.19
SEM1-220ENST00000619259 ALDH1A1P00352 501 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 CSB-PGBD3P0DP91 1061 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
SEM1-220ENST00000619259 RETREG2Q8NC44 543 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 CDCA7Q9BWT1 371 aaPredicted RBP7.63□□□□□ -1.19
SEM1-220ENST00000619259 NOD1Q9Y239 953 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
SEM1-220ENST00000619259 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
SEM1-220ENST00000619259 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 SIAH2O43255 324 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 RASA1P20936 1047 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 USP4Q13107 963 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 KANK4Q5T7N3 995 aaPredicted RBP7.62□□□□□ -1.19
SEM1-220ENST00000619259 TRAF7Q6Q0C0 670 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 SIRT1Q96EB6 747 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 MYO15BQ96JP2 1530 aa7.62□□□□□ -1.19
SEM1-220ENST00000619259 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 ADH1CP00326 375 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 MYCP01106 439 aaPredicted RBP7.61□□□□□ -1.19
SEM1-220ENST00000619259 GRM5P41594 1212 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
SEM1-220ENST00000619259 PSME1Q06323 249 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 DHX9Q08211 1270 aaKnown RBP7.61□□□□□ -1.19
SEM1-220ENST00000619259 TRIM50Q86XT4 487 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 CCDC125Q86Z20 511 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 CCDC116Q8IYX3 515 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 TMPRSS4Q9NRS4 437 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 CHIC2Q9UKJ5 165 aa7.61□□□□□ -1.19
SEM1-220ENST00000619259 NR5A1Q13285 461 aa7.6□□□□□ -1.19
SEM1-220ENST00000619259 MPNDQ8N594 471 aa7.6□□□□□ -1.19
SEM1-220ENST00000619259 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
SEM1-220ENST00000619259 ATG7O95352 703 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 ATP1A2P50993 1020 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 GTF2IP78347 998 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 SNIP1Q8TAD8 396 aaKnown RBP7.59□□□□□ -1.19
SEM1-220ENST00000619259 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 ZNF594Q96JF6 807 aaPredicted RBP7.59□□□□□ -1.19
SEM1-220ENST00000619259 CYLDQ9NQC7 956 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 PKD2L1Q9P0L9 805 aa7.59□□□□□ -1.19
SEM1-220ENST00000619259 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L10C9JJH3 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L12C9JPN9 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L21D6R901 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
SEM1-220ENST00000619259 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 1115.6 ms