RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
CNOT3-210ENST00000618939 CAVIN1Q6NZI2 390 aaKnown RBP16.86■□□□□ 0.29
CNOT3-210ENST00000618939 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
CNOT3-210ENST00000618939 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
CNOT3-210ENST00000618939 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
CNOT3-210ENST00000618939 VPS37CA5D8V6 355 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-210ENST00000618939 RLBP1P12271 317 aa16.85■□□□□ 0.29
CNOT3-210ENST00000618939 FBLN1P23142 703 aa16.85■□□□□ 0.29
CNOT3-210ENST00000618939 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
CNOT3-210ENST00000618939 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
CNOT3-210ENST00000618939 ABCA8O94911 1581 aa16.85■□□□□ 0.29
CNOT3-210ENST00000618939 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-210ENST00000618939 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-210ENST00000618939 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
CNOT3-210ENST00000618939 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
CNOT3-210ENST00000618939 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
CNOT3-210ENST00000618939 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
CNOT3-210ENST00000618939 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.29
CNOT3-210ENST00000618939 NLRP2Q9NX02 1062 aa16.83■□□□□ 0.29
CNOT3-210ENST00000618939 ARID3AQ99856 593 aa16.83■□□□□ 0.28
CNOT3-210ENST00000618939 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
CNOT3-210ENST00000618939 MBD3O95983 291 aa16.82■□□□□ 0.28
CNOT3-210ENST00000618939 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
CNOT3-210ENST00000618939 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
CNOT3-210ENST00000618939 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
CNOT3-210ENST00000618939 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
CNOT3-210ENST00000618939 HSP90AA2PQ14568 343 aaPredicted RBP16.81■□□□□ 0.28
CNOT3-210ENST00000618939 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
CNOT3-210ENST00000618939 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
CNOT3-210ENST00000618939 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
CNOT3-210ENST00000618939 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
CNOT3-210ENST00000618939 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
CNOT3-210ENST00000618939 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
CNOT3-210ENST00000618939 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
CNOT3-210ENST00000618939 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
CNOT3-210ENST00000618939 SMARCA5O60264 1052 aaPredicted RBP16.8■□□□□ 0.28
CNOT3-210ENST00000618939 RNF214Q8ND24 703 aa16.8■□□□□ 0.28
CNOT3-210ENST00000618939 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
CNOT3-210ENST00000618939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■■□ 19.3
CNOT3-210ENST00000618939 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
CNOT3-210ENST00000618939 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
CNOT3-210ENST00000618939 TPM4P67936 248 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 NUCB1Q02818 461 aa16.78■□□□□ 0.28
CNOT3-210ENST00000618939 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
CNOT3-210ENST00000618939 POLKQ9UBT6 870 aa16.77■□□□□ 0.28
CNOT3-210ENST00000618939 F6X3S4 739 aa16.77■□□□□ 0.27
CNOT3-210ENST00000618939 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.27
CNOT3-210ENST00000618939 ERC1Q8IUD2 1116 aa16.77■□□□□ 0.27
CNOT3-210ENST00000618939 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
CNOT3-210ENST00000618939 GOLGA6L19H0YKK7 550 aa16.76■□□□□ 0.27
CNOT3-210ENST00000618939 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
CNOT3-210ENST00000618939 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-210ENST00000618939 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 PSMA5P28066 241 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 CCDC173Q0VFZ6 552 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 PTPRCP08575 1304 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 BECN2A8MW95 431 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 ATF3P18847 181 aa16.75■□□□□ 0.27
CNOT3-210ENST00000618939 MAP4K4O95819 1239 aaPredicted RBP16.74■□□□□ 0.27
CNOT3-210ENST00000618939 PTPRTO14522 1441 aa16.74■□□□□ 0.27
CNOT3-210ENST00000618939 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
CNOT3-210ENST00000618939 SEC24BO95487 1268 aa16.74■□□□□ 0.27
CNOT3-210ENST00000618939 MX1P20591 662 aa16.74■□□□□ 0.27
CNOT3-210ENST00000618939 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
CNOT3-210ENST00000618939 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
CNOT3-210ENST00000618939 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
CNOT3-210ENST00000618939 EVA1CP58658 441 aa16.73■□□□□ 0.27
CNOT3-210ENST00000618939 ACEP12821 1306 aa16.73■□□□□ 0.27
CNOT3-210ENST00000618939 HIP1O00291 1037 aa16.73■□□□□ 0.27
CNOT3-210ENST00000618939 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
CNOT3-210ENST00000618939 ATP10AO60312 1499 aa16.72■□□□□ 0.27
CNOT3-210ENST00000618939 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
CNOT3-210ENST00000618939 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
CNOT3-210ENST00000618939 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
CNOT3-210ENST00000618939 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
CNOT3-210ENST00000618939 FIBPO43427 364 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
CNOT3-210ENST00000618939 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 CCDC34Q96HJ3 373 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 KDM5DQ9BY66 1539 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.27
CNOT3-210ENST00000618939 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.26
CNOT3-210ENST00000618939 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.26
CNOT3-210ENST00000618939 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 VAMP4O75379 141 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-210ENST00000618939 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 CPLX1O14810 134 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 SSFA2P28290 1259 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 FLIIQ13045 1269 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms