RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
SRRT-216ENST00000618262 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
SRRT-216ENST00000618262 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
SRRT-216ENST00000618262 NUTM2BA6NNL0 878 aaPredicted RBP15.7■□□□□ 0.1
SRRT-216ENST00000618262 NUTM2EB1AL46 878 aaPredicted RBP15.7■□□□□ 0.1
SRRT-216ENST00000618262 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
SRRT-216ENST00000618262 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
SRRT-216ENST00000618262 COG3Q96JB2 828 aa15.7■□□□□ 0.1
SRRT-216ENST00000618262 EMILIN1Q9Y6C2 1016 aa15.7■□□□□ 0.1
SRRT-216ENST00000618262 CDC42BPGQ6DT37 1551 aa15.7■□□□□ 0.1
SRRT-216ENST00000618262 TMED8Q6PL24 325 aaPredicted RBP15.69■□□□□ 0.1
SRRT-216ENST00000618262 LTV1Q96GA3 475 aaPredicted RBP15.69■□□□□ 0.1
SRRT-216ENST00000618262 USP6P35125 1406 aa15.69■□□□□ 0.1
SRRT-216ENST00000618262 PRDM4Q9UKN5 801 aa15.69■□□□□ 0.1
SRRT-216ENST00000618262 FMN2Q9NZ56 1722 aa15.69■□□□□ 0.1
SRRT-216ENST00000618262 CPSF1Q10570 1443 aaKnown RBP15.68■□□□□ 0.1
SRRT-216ENST00000618262 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
SRRT-216ENST00000618262 RGS3P49796 1198 aa15.67■□□□□ 0.1
SRRT-216ENST00000618262 MTHFSP49914 203 aa15.67■□□□□ 0.1
SRRT-216ENST00000618262 PUS7Q96PZ0 661 aaKnown RBP15.67■□□□□ 0.1
SRRT-216ENST00000618262 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
SRRT-216ENST00000618262 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
SRRT-216ENST00000618262 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
SRRT-216ENST00000618262 NPHP3Q7Z494 1330 aa15.66■□□□□ 0.1
SRRT-216ENST00000618262 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
SRRT-216ENST00000618262 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
SRRT-216ENST00000618262 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
SRRT-216ENST00000618262 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
SRRT-216ENST00000618262 FAM43AQ8N2R8 423 aa15.63■□□□□ 0.09
SRRT-216ENST00000618262 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
SRRT-216ENST00000618262 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
SRRT-216ENST00000618262 HSPA1LP34931 641 aa15.62■□□□□ 0.09
SRRT-216ENST00000618262 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
SRRT-216ENST00000618262 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
SRRT-216ENST00000618262 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
SRRT-216ENST00000618262 DCCP43146 1447 aa15.61■□□□□ 0.09
SRRT-216ENST00000618262 NCOA3Q9Y6Q9 1424 aa15.61■□□□□ 0.09
SRRT-216ENST00000618262 GCP02774 474 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 AMPHP49418 695 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 RALBP1Q15311 655 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
SRRT-216ENST00000618262 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
SRRT-216ENST00000618262 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
SRRT-216ENST00000618262 TOPAZ1Q8N9V7 1692 aa15.59■□□□□ 0.09
SRRT-216ENST00000618262 ROBO1Q9Y6N7 1651 aa15.59■□□□□ 0.09
SRRT-216ENST00000618262 ITSN1Q15811 1721 aa15.59■□□□□ 0.09
SRRT-216ENST00000618262 MAP3K19Q56UN5 1328 aa15.58■□□□□ 0.08
SRRT-216ENST00000618262 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
SRRT-216ENST00000618262 CLSTN1O94985 981 aa15.58■□□□□ 0.08
SRRT-216ENST00000618262 HMOX1P09601 288 aa15.57■□□□□ 0.08
SRRT-216ENST00000618262 USHBP1Q8N6Y0 703 aa15.57■□□□□ 0.08
SRRT-216ENST00000618262 HSP90AA1P07900 732 aaKnown RBP15.57■□□□□ 0.08
SRRT-216ENST00000618262 AXIN2Q9Y2T1 843 aa15.56■□□□□ 0.08
SRRT-216ENST00000618262 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
SRRT-216ENST00000618262 SOS2Q07890 1332 aaPredicted RBP15.56■□□□□ 0.08
SRRT-216ENST00000618262 NEUROD2Q15784 382 aa15.56■□□□□ 0.08
SRRT-216ENST00000618262 STRN4Q9NRL3 753 aa15.56■□□□□ 0.08
SRRT-216ENST00000618262 TTC21AQ8NDW8 1320 aa15.56■□□□□ 0.08
SRRT-216ENST00000618262 NEFMP07197 916 aa15.55■□□□□ 0.08
SRRT-216ENST00000618262 LRRC59Q96AG4 307 aaKnown RBP15.55■□□□□ 0.08
SRRT-216ENST00000618262 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
SRRT-216ENST00000618262 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.087e-7■■■□□ 19.2
SRRT-216ENST00000618262 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
SRRT-216ENST00000618262 PRDM11Q9NQV5 511 aa15.54■□□□□ 0.08
SRRT-216ENST00000618262 ADAMTS8Q9UP79 889 aa15.54■□□□□ 0.08
SRRT-216ENST00000618262 PXDNQ92626 1479 aa15.53■□□□□ 0.08
SRRT-216ENST00000618262 PIK3C2AO00443 1686 aa15.53■□□□□ 0.08
SRRT-216ENST00000618262 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
SRRT-216ENST00000618262 PLCD4Q9BRC7 762 aa15.53■□□□□ 0.08
SRRT-216ENST00000618262 PATL2C9JE40 543 aaKnown RBP15.52■□□□□ 0.08
SRRT-216ENST00000618262 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
SRRT-216ENST00000618262 AKAP12Q02952 1782 aa15.52■□□□□ 0.08
SRRT-216ENST00000618262 WDR43Q15061 677 aaKnown RBP eCLIP15.52■□□□□ 0.07
SRRT-216ENST00000618262 TNS3Q68CZ2 1445 aa15.52■□□□□ 0.07
SRRT-216ENST00000618262 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.07
SRRT-216ENST00000618262 MON2Q7Z3U7 1717 aa15.52■□□□□ 0.07
SRRT-216ENST00000618262 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 FAM193AP78312 1265 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 C8orf37Q96NL8 207 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 AEBP1Q8IUX7 1158 aa15.51■□□□□ 0.07
SRRT-216ENST00000618262 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.07
SRRT-216ENST00000618262 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
SRRT-216ENST00000618262 PNISRQ8TF01 805 aaKnown RBP15.49■□□□□ 0.07
SRRT-216ENST00000618262 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
SRRT-216ENST00000618262 DIAPH1O60610 1272 aaKnown RBP15.48■□□□□ 0.07
SRRT-216ENST00000618262 HOXC9P31274 260 aa15.48■□□□□ 0.07
SRRT-216ENST00000618262 EIF4A2Q14240 407 aaKnown RBP15.48■□□□□ 0.07
SRRT-216ENST00000618262 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
SRRT-216ENST00000618262 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
SRRT-216ENST00000618262 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 NSD2O96028 1365 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 EP400Q96L91 3159 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 KCNH5Q8NCM2 988 aa15.47■□□□□ 0.07
SRRT-216ENST00000618262 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms