RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
VPS45-213ENST00000618148 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
VPS45-213ENST00000618148 KRT28Q7Z3Y7 464 aa10.14□□□□□ -0.79
VPS45-213ENST00000618148 MORC1Q86VD1 984 aa10.14□□□□□ -0.79
VPS45-213ENST00000618148 SLIT3O75094 1523 aa10.14□□□□□ -0.79
VPS45-213ENST00000618148 USP19O94966 1318 aa10.14□□□□□ -0.79
VPS45-213ENST00000618148 TOM1O60784 492 aa10.13□□□□□ -0.79
VPS45-213ENST00000618148 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
VPS45-213ENST00000618148 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
VPS45-213ENST00000618148 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
VPS45-213ENST00000618148 NFAT5O94916 1531 aa10.13□□□□□ -0.79
VPS45-213ENST00000618148 COG3Q96JB2 828 aa10.12□□□□□ -0.79
VPS45-213ENST00000618148 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
VPS45-213ENST00000618148 INSRP06213 1382 aa10.12□□□□□ -0.79
VPS45-213ENST00000618148 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
VPS45-213ENST00000618148 PNPLA6Q8IY17 1366 aa10.11□□□□□ -0.79
VPS45-213ENST00000618148 PHRF1Q9P1Y6 1649 aaKnown RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
VPS45-213ENST00000618148 DDX17Q92841 729 aaKnown RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 COL3A1P02461 1466 aaPredicted RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
VPS45-213ENST00000618148 NLRP6P59044 892 aa10.1□□□□□ -0.79
VPS45-213ENST00000618148 CCDC184Q52MB2 194 aa10.1□□□□□ -0.79
VPS45-213ENST00000618148 KIF24Q5T7B8 1368 aa10.1□□□□□ -0.79
VPS45-213ENST00000618148 COL22A1Q8NFW1 1626 aaPredicted RBP10.09□□□□□ -0.79
VPS45-213ENST00000618148 UBAP1LF5GYI3 381 aa10.09□□□□□ -0.79
VPS45-213ENST00000618148 POLKQ9UBT6 870 aa10.09□□□□□ -0.79
VPS45-213ENST00000618148 ABCC6O95255 1503 aa10.08□□□□□ -0.8
VPS45-213ENST00000618148 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
VPS45-213ENST00000618148 KCNH5Q8NCM2 988 aa10.08□□□□□ -0.8
VPS45-213ENST00000618148 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
VPS45-213ENST00000618148 PEAK1Q9H792 1746 aa10.08□□□□□ -0.8
VPS45-213ENST00000618148 RTL1A6NKG5 1358 aa10.07□□□□□ -0.8
VPS45-213ENST00000618148 MAP2P11137 1827 aaKnown RBP10.07□□□□□ -0.8
VPS45-213ENST00000618148 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
VPS45-213ENST00000618148 MTHFSP49914 203 aa10.07□□□□□ -0.8
VPS45-213ENST00000618148 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
VPS45-213ENST00000618148 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
VPS45-213ENST00000618148 CPDO75976 1380 aa10.07□□□□□ -0.8
VPS45-213ENST00000618148 SHPRHQ149N8 1683 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 MAP3K19Q56UN5 1328 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
VPS45-213ENST00000618148 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
VPS45-213ENST00000618148 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 GCP02774 474 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 NUTM2GQ5VZR2 741 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
VPS45-213ENST00000618148 FLT4P35916 1363 aa10.05□□□□□ -0.8
VPS45-213ENST00000618148 FBLN1P23142 703 aa10.05□□□□□ -0.8
VPS45-213ENST00000618148 ARHGEF25Q86VW2 580 aa10.05□□□□□ -0.8
VPS45-213ENST00000618148 RRS1Q15050 365 aaKnown RBP10.04□□□□□ -0.8
VPS45-213ENST00000618148 CFAP53Q96M91 514 aa10.04□□□□□ -0.8
VPS45-213ENST00000618148 LTN1O94822 1766 aa10.04□□□□□ -0.8
VPS45-213ENST00000618148 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
VPS45-213ENST00000618148 COL18A1P39060 1754 aa10.03□□□□□ -0.8
VPS45-213ENST00000618148 RGPD1P0DJD0 1748 aa10.03□□□□□ -0.8
VPS45-213ENST00000618148 BLMP54132 1417 aaPredicted RBP10.03□□□□□ -0.8
VPS45-213ENST00000618148 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.8
VPS45-213ENST00000618148 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.8
VPS45-213ENST00000618148 IP6K1Q92551 441 aa10.02□□□□□ -0.81
VPS45-213ENST00000618148 LMO7Q8WWI1 1683 aa10.01□□□□□ -0.81
VPS45-213ENST00000618148 HOXC9P31274 260 aa10.01□□□□□ -0.81
VPS45-213ENST00000618148 IL13P35225 146 aa10.01□□□□□ -0.81
VPS45-213ENST00000618148 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
VPS45-213ENST00000618148 NCAPD2Q15021 1401 aa10□□□□□ -0.81
VPS45-213ENST00000618148 DIAPH1O60610 1272 aaKnown RBP10□□□□□ -0.81
VPS45-213ENST00000618148 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
VPS45-213ENST00000618148 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
VPS45-213ENST00000618148 KIAA0232Q92628 1395 aa10□□□□□ -0.81
VPS45-213ENST00000618148 JCADQ9P266 1359 aa10□□□□□ -0.81
VPS45-213ENST00000618148 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 SOX12O15370 315 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 C7P10643 843 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 AMPHP49418 695 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 EIF4A2Q14240 407 aaKnown RBP9.99□□□□□ -0.81
VPS45-213ENST00000618148 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 KDRP35968 1356 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
VPS45-213ENST00000618148 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
VPS45-213ENST00000618148 WDR43Q15061 677 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS45-213ENST00000618148 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
VPS45-213ENST00000618148 NUDCQ9Y266 331 aa9.98□□□□□ -0.81
VPS45-213ENST00000618148 IGSF1Q8N6C5 1336 aa9.98□□□□□ -0.81
VPS45-213ENST00000618148 COL14A1Q05707 1796 aaKnown RBP9.97□□□□□ -0.81
VPS45-213ENST00000618148 FAM208AQ9UK61 1670 aaKnown RBP9.97□□□□□ -0.81
VPS45-213ENST00000618148 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
VPS45-213ENST00000618148 ERBB3P21860 1342 aa9.97□□□□□ -0.81
VPS45-213ENST00000618148 HSPA1LP34931 641 aa9.96□□□□□ -0.81
VPS45-213ENST00000618148 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.81
VPS45-213ENST00000618148 AXIN2Q9Y2T1 843 aa9.96□□□□□ -0.81
VPS45-213ENST00000618148 SPATA31A6Q5VVP1 1343 aa9.96□□□□□ -0.81
VPS45-213ENST00000618148 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.82
VPS45-213ENST00000618148 PRDM11Q9NQV5 511 aa9.96□□□□□ -0.82
VPS45-213ENST00000618148 COL5A2P05997 1499 aaPredicted RBP9.96□□□□□ -0.82
VPS45-213ENST00000618148 FCHSD2O94868 740 aa9.95□□□□□ -0.82
VPS45-213ENST00000618148 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
VPS45-213ENST00000618148 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms