RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 IFFO2Q5TF58 517 aa25.69■■□□□ 1.7
TRAPPC3-209ENST00000616395 STK32BQ9NY57 414 aa25.67■■□□□ 1.7
TRAPPC3-209ENST00000616395 MARCH10Q8NA82 808 aaPredicted RBP25.66■■□□□ 1.7
TRAPPC3-209ENST00000616395 TXNRD1Q16881 649 aa25.65■■□□□ 1.7
TRAPPC3-209ENST00000616395 SLC15A2Q16348 729 aa25.64■■□□□ 1.7
TRAPPC3-209ENST00000616395 TOM1L2Q6ZVM7 507 aa25.64■■□□□ 1.7
TRAPPC3-209ENST00000616395 SGIP1Q9BQI5 828 aa25.64■■□□□ 1.7
TRAPPC3-209ENST00000616395 AATKQ6ZMQ8 1374 aa25.64■■□□□ 1.69
TRAPPC3-209ENST00000616395 MTFR1LQ9H019 292 aa25.63■■□□□ 1.69
TRAPPC3-209ENST00000616395 BCL9O00512 1426 aa25.62■■□□□ 1.69
TRAPPC3-209ENST00000616395 CHD4Q14839 1912 aa25.61■■□□□ 1.69
TRAPPC3-209ENST00000616395 STAC3Q96MF2 364 aa25.6■■□□□ 1.69
TRAPPC3-209ENST00000616395 PPIP5K1Q6PFW1 1433 aa25.58■■□□□ 1.69
TRAPPC3-209ENST00000616395 ARXQ96QS3 562 aa25.58■■□□□ 1.69
TRAPPC3-209ENST00000616395 NLRP6P59044 892 aa25.57■■□□□ 1.68
TRAPPC3-209ENST00000616395 AXIN2Q9Y2T1 843 aa25.57■■□□□ 1.68
TRAPPC3-209ENST00000616395 WNK3Q9BYP7 1800 aa25.57■■□□□ 1.68
TRAPPC3-209ENST00000616395 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
TRAPPC3-209ENST00000616395 AKAP12Q02952 1782 aa25.56■■□□□ 1.68
TRAPPC3-209ENST00000616395 SLIT3O75094 1523 aa25.56■■□□□ 1.68
TRAPPC3-209ENST00000616395 CDCA7Q9BWT1 371 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC3-209ENST00000616395 SRPK2P78362 688 aaKnown RBP25.54■■□□□ 1.68
TRAPPC3-209ENST00000616395 COL18A1P39060 1754 aa25.53■■□□□ 1.68
TRAPPC3-209ENST00000616395 GIGYF1O75420 1035 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC3-209ENST00000616395 BRD4O60885 1362 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC3-209ENST00000616395 MAP3K5Q99683 1374 aa25.53■■□□□ 1.68
TRAPPC3-209ENST00000616395 GPR162Q16538 588 aa25.52■■□□□ 1.68
TRAPPC3-209ENST00000616395 CABP2Q9NPB3 220 aa25.51■■□□□ 1.67
TRAPPC3-209ENST00000616395 USP6P35125 1406 aa25.5■■□□□ 1.67
TRAPPC3-209ENST00000616395 EXOC5O00471 708 aa25.49■■□□□ 1.67
TRAPPC3-209ENST00000616395 CARD10Q9BWT7 1032 aa25.49■■□□□ 1.67
TRAPPC3-209ENST00000616395 RAB3GAP2Q9H2M9 1393 aa25.48■■□□□ 1.67
TRAPPC3-209ENST00000616395 CPSF1Q10570 1443 aaKnown RBP25.48■■□□□ 1.67
TRAPPC3-209ENST00000616395 CSB-PGBD3P0DP91 1061 aa25.47■■□□□ 1.67
TRAPPC3-209ENST00000616395 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
TRAPPC3-209ENST00000616395 CEP350Q5VT06 3117 aa25.46■■□□□ 1.67
TRAPPC3-209ENST00000616395 ARHGEF25Q86VW2 580 aa25.45■■□□□ 1.66
TRAPPC3-209ENST00000616395 PAPPAQ13219 1627 aa25.45■■□□□ 1.66
TRAPPC3-209ENST00000616395 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
TRAPPC3-209ENST00000616395 ACSBG1Q96GR2 724 aa25.44■■□□□ 1.66
TRAPPC3-209ENST00000616395 ZNF827Q17R98 1081 aa25.43■■□□□ 1.66
TRAPPC3-209ENST00000616395 NHSQ6T4R5 1651 aa25.43■■□□□ 1.66
TRAPPC3-209ENST00000616395 TNS2Q63HR2 1409 aa25.42■■□□□ 1.66
TRAPPC3-209ENST00000616395 NBPF1Q3BBV0 1214 aa25.42■■□□□ 1.66
TRAPPC3-209ENST00000616395 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
TRAPPC3-209ENST00000616395 KLHL34Q8N239 644 aa25.42■■□□□ 1.66
TRAPPC3-209ENST00000616395 SOX12O15370 315 aa25.41■■□□□ 1.66
TRAPPC3-209ENST00000616395 RGPD5Q99666 1765 aa25.41■■□□□ 1.66
TRAPPC3-209ENST00000616395 CENPJQ9HC77 1338 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC3-209ENST00000616395 CCDC7Q96M83 1385 aa25.39■■□□□ 1.66
TRAPPC3-209ENST00000616395 KCNH5Q8NCM2 988 aa25.38■■□□□ 1.65
TRAPPC3-209ENST00000616395 SHANK3Q9BYB0 1731 aa25.38■■□□□ 1.65
TRAPPC3-209ENST00000616395 KIAA1210Q9ULL0 1709 aa25.38■■□□□ 1.65
TRAPPC3-209ENST00000616395 TRPM1Q7Z4N2 1603 aa25.38■■□□□ 1.65
TRAPPC3-209ENST00000616395 LRRC4BQ9NT99 713 aa25.37■■□□□ 1.65
TRAPPC3-209ENST00000616395 GOLGB1Q14789 3259 aaKnown RBP25.37■■□□□ 1.65
TRAPPC3-209ENST00000616395 QRICH2Q9H0J4 1663 aa25.35■■□□□ 1.65
TRAPPC3-209ENST00000616395 ABCC6O95255 1503 aa25.34■■□□□ 1.65
TRAPPC3-209ENST00000616395 POLD1P28340 1107 aa25.34■■□□□ 1.65
TRAPPC3-209ENST00000616395 NLGN2Q8NFZ4 835 aa25.34■■□□□ 1.65
TRAPPC3-209ENST00000616395 SLC16A10Q8TF71 515 aa25.34■■□□□ 1.65
TRAPPC3-209ENST00000616395 TTC21BQ7Z4L5 1316 aa25.33■■□□□ 1.65
TRAPPC3-209ENST00000616395 BTAF1O14981 1849 aa25.33■■□□□ 1.65
TRAPPC3-209ENST00000616395 AKT1S1Q96B36 256 aa25.33■■□□□ 1.64
TRAPPC3-209ENST00000616395 NFAT5O94916 1531 aa25.32■■□□□ 1.64
TRAPPC3-209ENST00000616395 PNPLA7Q6ZV29 1317 aa25.29■■□□□ 1.64
TRAPPC3-209ENST00000616395 YBX3P16989 372 aaKnown RBP eCLIP25.28■■□□□ 1.649e-6■■■□□ 18.1
TRAPPC3-209ENST00000616395 NLRP2Q9NX02 1062 aa25.28■■□□□ 1.64
TRAPPC3-209ENST00000616395 COL24A1Q17RW2 1714 aa25.27■■□□□ 1.64
TRAPPC3-209ENST00000616395 IL2RBP14784 551 aa25.27■■□□□ 1.64
TRAPPC3-209ENST00000616395 ZNF692Q9BU19 519 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC3-209ENST00000616395 TTC21AQ8NDW8 1320 aa25.26■■□□□ 1.63
TRAPPC3-209ENST00000616395 ERBB3P21860 1342 aa25.25■■□□□ 1.63
TRAPPC3-209ENST00000616395 SLC27A3Q5K4L6 730 aa25.25■■□□□ 1.63
TRAPPC3-209ENST00000616395 QSER1Q2KHR3 1735 aa25.25■■□□□ 1.63
TRAPPC3-209ENST00000616395 EVC2Q86UK5 1308 aa25.24■■□□□ 1.63
TRAPPC3-209ENST00000616395 GRIN3BO60391 1043 aa25.24■■□□□ 1.63
TRAPPC3-209ENST00000616395 TFCP2L1Q9NZI6 479 aa25.24■■□□□ 1.63
TRAPPC3-209ENST00000616395 KCNQ4P56696 695 aa25.23■■□□□ 1.63
TRAPPC3-209ENST00000616395 ATP10DQ9P241 1426 aa25.23■■□□□ 1.63
TRAPPC3-209ENST00000616395 TUBGCP6Q96RT7 1819 aa25.18■■□□□ 1.62
TRAPPC3-209ENST00000616395 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
TRAPPC3-209ENST00000616395 HSPA6P17066 643 aa25.16■■□□□ 1.62
TRAPPC3-209ENST00000616395 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
TRAPPC3-209ENST00000616395 ANKRD24Q8TF21 1146 aa25.16■■□□□ 1.62
TRAPPC3-209ENST00000616395 GPBP1L1Q9HC44 474 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC3-209ENST00000616395 KAT6BQ8WYB5 2073 aa25.13■■□□□ 1.61
TRAPPC3-209ENST00000616395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.13■■□□□ 1.61
TRAPPC3-209ENST00000616395 SYTL4Q96C24 671 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC3-209ENST00000616395 USP31Q70CQ4 1352 aa25.13■■□□□ 1.61
TRAPPC3-209ENST00000616395 MSH5O43196 834 aa25.12■■□□□ 1.61
TRAPPC3-209ENST00000616395 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC3-209ENST00000616395 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC3-209ENST00000616395 PRIM1P49642 420 aaKnown RBP25.12■■□□□ 1.61
TRAPPC3-209ENST00000616395 NME9Q86XW9 330 aa25.11■■□□□ 1.61
TRAPPC3-209ENST00000616395 COL23A1Q86Y22 540 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC3-209ENST00000616395 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
TRAPPC3-209ENST00000616395 ADCY9O60503 1353 aa25.09■■□□□ 1.61
TRAPPC3-209ENST00000616395 LTN1O94822 1766 aa25.09■■□□□ 1.61
TRAPPC3-209ENST00000616395 ANKRD36BQ8N2N9 1353 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms