RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RAPGEF4Q8WZA2 1011 aa6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 FOXO3O43524 673 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 HSP90AB4PQ58FF6 505 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZKSCAN1P17029 563 aaPredicted RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 ERVK-7P63135 1459 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 DNTTIP2Q5QJE6 756 aaKnown RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 RBM33Q96EV2 1170 aaKnown RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 ARHGEF5Q12774 1597 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 EIF4A2Q14240 407 aaKnown RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 MSNP26038 577 aaKnown RBP6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 FLIIQ13045 1269 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 RSPH6AQ9H0K4 717 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 GCC2Q8IWJ2 1684 aa6.88□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZBTB7BO15156 539 aaPredicted RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 ISY1Q9ULR0 285 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 ANKRD44Q8N8A2 993 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 RBM42Q9BTD8 480 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 NAP1L2Q9ULW6 460 aaPredicted RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 YTHDC2Q9H6S0 1430 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 NUCB1Q02818 461 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 SYAP1Q96A49 352 aaPredicted RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 ERC2O15083 957 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 DCTPP1Q9H773 170 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 IFIT2P09913 472 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 AIMP1Q12904 312 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 SMARCA5O60264 1052 aaPredicted RBP6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 LRRCC1Q9C099 1032 aa6.87□□□□□ -1.31
SYNCRIP-204ENST00000616122 DDX58O95786 925 aaKnown RBP6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 MRPL50Q8N5N7 158 aaKnown RBP6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 PHF8Q9UPP1 1060 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 UHRF1BP1LA0JNW5 1464 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 IL13P35225 146 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.312e-6■■■□□ 15.3
SYNCRIP-204ENST00000616122 GLIPR1L2Q4G1C9 344 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 CHL1O00533 1208 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 PLEKHO1Q53GL0 409 aaPredicted RBP6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 ATP6V1DQ9Y5K8 247 aa6.86□□□□□ -1.31
SYNCRIP-204ENST00000616122 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 ANKLE2Q86XL3 938 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 ATP7AQ04656 1500 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 MCM2P49736 904 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 TAF7Q15545 349 aaPredicted RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 MCTP1Q6DN14 999 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 KDM5CP41229 1560 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZRSR1Q15695 479 aaKnown RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 RNF214Q8ND24 703 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 ANXA1P04083 346 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 TTC5Q8N0Z6 440 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 PRPF40AO75400 957 aaKnown RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 TNPO1Q92973 898 aaKnown RBP6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 EYA1Q99502 592 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 TBX22Q9Y458 520 aa6.85□□□□□ -1.31
SYNCRIP-204ENST00000616122 POGZQ7Z3K3 1410 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 MX1P20591 662 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 TAOK2Q9UL54 1235 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 SAMD9LQ8IVG5 1584 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 KDM5DQ9BY66 1539 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 GORABQ5T7V8 394 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 C16orf71Q8IYS4 520 aaPredicted RBP6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 USHBP1Q8N6Y0 703 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZMYM4Q5VZL5 1548 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 VPS37CA5D8V6 355 aaPredicted RBP6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 MBD3O95983 291 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 KCNA6P17658 529 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 SDSP20132 328 aa6.84□□□□□ -1.31
SYNCRIP-204ENST00000616122 ESPNB1AK53 854 aa6.84□□□□□ -1.32
SYNCRIP-204ENST00000616122 MTHFSDQ2M296 383 aaKnown RBP6.84□□□□□ -1.32
SYNCRIP-204ENST00000616122 YEATS2Q9ULM3 1422 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PLEKHG3A1L390 1219 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PI4KAP2A4QPH2 592 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PI4KAP1Q8N8J0 262 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PDE1AP54750 535 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 KIAA2012Q0VF49 1180 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 TSHZ3Q63HK5 1081 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 RIMS2Q9UQ26 1411 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 TNRQ92752 1358 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 ERCC6L2Q5T890 1561 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 SSFA2P28290 1259 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 OTUD7AQ8TE49 926 aaPredicted RBP6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 LRRFIP2Q9Y608 721 aaKnown RBP6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PLEKHF1Q96S99 279 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 SMC3Q9UQE7 1217 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 PTPRCP08575 1304 aa6.83□□□□□ -1.32
SYNCRIP-204ENST00000616122 GRPEL1Q9HAV7 217 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms